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Strain identifier

BacDive ID: 133212

Type strain: Yes

Species: Rickettsia asembonensis

Strain Designation: NMRCii

NCBI tax ID(s): 1068590 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 25024

BacDive-ID: 133212

DSM-Number: 100172

keywords: genome sequence, Bacteria, obligate aerobe, mesophilic

description: Rickettsia asembonensis NMRCii is an obligate aerobe, mesophilic bacterium of the family Rickettsiaceae.

NCBI tax id

  • NCBI tax id: 1068590
  • Matching level: species

doi: 10.13145/bacdive133212.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Rickettsiales
  • family: Rickettsiaceae
  • genus: Rickettsia
  • species: Rickettsia asembonensis
  • full scientific name: Candidatus Rickettsia asembonensis corrig. Jiang et al. 2013
  • synonyms

    @refsynonym
    20215Rickettsia asemboensis
    20215Rickettsia asembonensis

@ref: 25024

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rickettsiales

family: Rickettsiaceae

genus: Rickettsia

species: Rickettsia asembonensis

strain designation: NMRCii

type strain: yes

Morphology

colony morphology

  • @ref: 25024
  • medium used: Schneider’s Drosophila medium

Culture and growth conditions

culture medium

  • @ref: 25024
  • name: Schneider’s Drosophila medium
  • growth: yes
  • composition: 5 % heat-inactivated fetal bovine serum

culture temp

  • @ref: 25024
  • growth: positive
  • type: growth
  • temperature: 25
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 25024
  • oxygen tolerance: obligate aerobe

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Rickettsia asembonensis NMRCiiGCA_000828125contigncbi1068590
66792Rickettsia asembonensis NMRCii2802429295completeimg1068590

GC content

  • @ref: 25024
  • GC-content: 32.28
  • method: genome sequence analysis

External links

@ref: 25024

culture collection no.: DSM 100172, CDC CRIRC RAS001, ATCC VR-1827

literature

topicPubmed-IDtitleauthorsjournalDOIyeartopic2mesh
Genetics25767219Whole-Genome Sequence of "Candidatus Rickettsia asemboensis" Strain NMRCii, Isolated from Fleas of Western Kenya.Jima DD, Luce-Fedrow A, Yang Y, Maina AN, Snesrud EC, Otiang E, Njenga K, Jarman RG, Richards AL, Hang JGenome Announc10.1128/genomeA.00018-152015Phylogeny
Phylogeny27506201Isolation and characterization of a novel Rickettsia species (Rickettsia asembonensis sp. nov.) obtained from cat fleas (Ctenocephalides felis).Maina AN, Luce-Fedrow A, Omulo S, Hang J, Chan TC, Ade F, Jima DD, Ogola E, Ge H, Breiman RF, Njenga MK, Richards ALInt J Syst Evol Microbiol10.1099/ijsem.0.0013822016TranscriptomeAnimals, Bacterial Typing Techniques, Cats, Ctenocephalides/*microbiology, DNA, Bacterial/genetics, Genes, Bacterial, Kenya, *Phylogeny, RNA, Ribosomal, 16S/genetics, Rickettsia/*classification/genetics/isolation & purification, Sequence Analysis, DNA

Reference

@idauthorstitledoi/urljournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
25024A. N. L.-F. Maina, A.,Omulo, S.,Hang, J.,Chan, T. C.,Ade, F.,Jima, D. D.,Ogola, E.,Ge, H.,Breiman, R. F.,Njenga, M. K.,Richards, A. L.Isolation and characterization of a novel Rickettsia species (Rickettsia asembonensis sp. nov.) obtained from cat fleas (Ctenocephalides felis)10.1099/ijsem.0.001382IJSEM 66: 4512-4517 201627506201
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes