Strain identifier
BacDive ID: 133212
Type strain: 
Species: Rickettsia asembonensis
Strain Designation: NMRCii
NCBI tax ID(s): 1068590 (species)
version 7.1 (current version)
General
@ref: 25024
BacDive-ID: 133212
DSM-Number: 100172
keywords: genome sequence, Bacteria, obligate aerobe, mesophilic
description: Rickettsia asembonensis NMRCii is an obligate aerobe, mesophilic bacterium of the family Rickettsiaceae.
NCBI tax id
- NCBI tax id: 1068590
- Matching level: species
doi: 10.13145/bacdive133212.20221219.7.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rickettsiales
- family: Rickettsiaceae
- genus: Rickettsia
- species: Rickettsia asembonensis
- full scientific name: Candidatus Rickettsia asembonensis corrig. Jiang et al. 2013
synonyms
@ref synonym 20215 Rickettsia asemboensis 20215 Rickettsia asembonensis
@ref: 25024
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rickettsiales
family: Rickettsiaceae
genus: Rickettsia
species: Rickettsia asembonensis
strain designation: NMRCii
type strain: yes
Morphology
colony morphology
- @ref: 25024
- medium used: Schneider’s Drosophila medium
Culture and growth conditions
culture medium
- @ref: 25024
- name: Schneider’s Drosophila medium
- growth: yes
- composition: 5 % heat-inactivated fetal bovine serum
culture temp
- @ref: 25024
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 25024
- oxygen tolerance: obligate aerobe
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Rickettsia asembonensis NMRCii | GCA_000828125 | contig | ncbi | 1068590 |
| 66792 | Rickettsia asembonensis NMRCii | 2802429295 | complete | img | 1068590 |
GC content
- @ref: 25024
- GC-content: 32.28
- method: genome sequence analysis
External links
@ref: 25024
culture collection no.: DSM 100172, CDC CRIRC RAS001, ATCC VR-1827
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | topic2 | mesh |
|---|---|---|---|---|---|---|---|---|
| Genetics | 25767219 | Whole-Genome Sequence of "Candidatus Rickettsia asemboensis" Strain NMRCii, Isolated from Fleas of Western Kenya. | Jima DD, Luce-Fedrow A, Yang Y, Maina AN, Snesrud EC, Otiang E, Njenga K, Jarman RG, Richards AL, Hang J | Genome Announc | 10.1128/genomeA.00018-15 | 2015 | Phylogeny | |
| Phylogeny | 27506201 | Isolation and characterization of a novel Rickettsia species (Rickettsia asembonensis sp. nov.) obtained from cat fleas (Ctenocephalides felis). | Maina AN, Luce-Fedrow A, Omulo S, Hang J, Chan TC, Ade F, Jima DD, Ogola E, Ge H, Breiman RF, Njenga MK, Richards AL | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001382 | 2016 | Transcriptome | Animals, Bacterial Typing Techniques, Cats, Ctenocephalides/*microbiology, DNA, Bacterial/genetics, Genes, Bacterial, Kenya, *Phylogeny, RNA, Ribosomal, 16S/genetics, Rickettsia/*classification/genetics/isolation & purification, Sequence Analysis, DNA |
Reference
| @id | authors | title | doi/url | journal | pubmed |
|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | ||
| 25024 | A. N. L.-F. Maina, A.,Omulo, S.,Hang, J.,Chan, T. C.,Ade, F.,Jima, D. D.,Ogola, E.,Ge, H.,Breiman, R. F.,Njenga, M. K.,Richards, A. L. | Isolation and characterization of a novel Rickettsia species (Rickettsia asembonensis sp. nov.) obtained from cat fleas (Ctenocephalides felis) | 10.1099/ijsem.0.001382 | IJSEM 66: 4512-4517 2016 | 27506201 |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |