Strain identifier

BacDive ID: 133162

Type strain: Yes

Species: Acinetobacter pragensis

Strain history: CIP <- 2018, A. Nemec, NIPH, Prague, Czech Republic: strain ANC 4149

NCBI tax ID(s): 1806892 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 8.1 (current version)

General

@ref: 24937

BacDive-ID: 133162

keywords: 16S sequence, Bacteria, aerobe, Gram-negative, coccus-shaped, colony-forming

description: Acinetobacter pragensis ANC 4149 is an aerobe, Gram-negative, coccus-shaped bacterium that forms circular colonies and was isolated from wetland sample; .

NCBI tax id

  • NCBI tax id: 1806892
  • Matching level: species

strain history

  • @ref: 121949
  • history: CIP <- 2018, A. Nemec, NIPH, Prague, Czech Republic: strain ANC 4149

doi: 10.13145/bacdive133162.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Moraxellaceae
  • genus: Acinetobacter
  • species: Acinetobacter pragensis
  • full scientific name: Acinetobacter pragensis Radolfova-Krizova et al. 2016

@ref: 24937

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Acinetobacter

species: Acinetobacter pragensis

type strain: yes

Morphology

cell morphology

@refgram staincell shapemotility
24937negativecoccus-shapedno
121949negativeoval-shapedno

colony morphology

@refcolony sizecolony colorcolony shapeincubation periodmedium used
249371.5 mmgrey-whitecircular1 daytryptic soy agar (Oxoid)
634451 day

Culture and growth conditions

culture medium

@refnamegrowthlink
24937tryptic soy agar (Oxoid)yes
121949CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
24937positivegrowth15-33
24937nogrowth37mesophilic
63445positivegrowth30mesophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
24937aerobe
63445aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
24937879973-aminobutyrate-growth
2493717128adipate-growth
2493778208azelaate-growth
2493716958beta-alanine-growth
2493730719citraconate-growth
2493717634D-glucose-builds acid from
2493717634D-glucose-growth
2493715588D-malate-growth
2493716988D-ribose-growth
249375291gelatin-hydrolysis
2493724265gluconate-growth
2493718295histamine-growth
2493730849L-arabinose-growth
2493716467L-arginine-growth
2493729991L-aspartate-growth
2493715971L-histidine-growth
2493715603L-leucine-growth
2493715729L-ornithine-growth
2493717295L-phenylalanine-growth
24937391504-oxopentanoate-growth
2493717148putrescine-growth
2493715708trans-aconitate-growth
2493762517tricarballylate-assimilation
2493718123trigonelline-growth
2493716765tryptamine-assimilation
24937620642,3-butanediol+assimilation
24937178794-hydroxybenzoate+carbon source
2493716150benzoate+carbon source
2493716947citrate+carbon source
2493716236ethanol+carbon source
2493758044gentisate+assimilation
2493717859glutaric acid+carbon source
2493730924L-tartrate+carbon source
2493724996lactate+carbon source
2493715792malonate+carbon source
2493716452oxaloacetate+carbon source
2493718401phenylacetate+assimilation
24937620642,3-butanediol+/-carbon source
2493758044gentisate+/-carbon source
2493729985L-glutamate+/-carbon source
2493718401phenylacetate+/-carbon source
2493762517tricarballylate+/-carbon source
2493716765tryptamine+/-carbon source

enzymes

@refvalueactivityec
24937catalase+1.11.1.6
24937cytochrome oxidase-1.9.3.1

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentlatitudelongitudeisolation datesampling date
24937wetland sample (water with organic debris)city of Nymburk in the Central Bohemian RegionCzech RepublicCZEEurope50152011-10
63445Water with mud from wetlandKreckov(50°11'6.568 N,15°6'52.083Czech RepublicCZEEurope2011-10-16
121949Environment, Wetland sample, water with organic debrisNear the city of Nymburk in the Central Bohemian RegionCzech RepublicCZEEurope2011-10-03

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Wetland (Swamp)

taxonmaps

  • @ref: 69479
  • File name: preview.99_8135.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_8;96_603;97_706;98_5922;99_8135&stattab=map
  • Last taxonomy: Acinetobacter pragensis subclade
  • 16S sequence: KX014586
  • Sequence Identity:
  • Total samples: 782
  • soil counts: 37
  • aquatic counts: 327
  • animal counts: 377
  • plant counts: 41

Safety information

risk assessment

  • @ref: 121949
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

16S sequences

  • @ref: 24937
  • description: 16S rRNA
  • accession: KX014586
  • database: nuccore

External links

@ref: 24937

culture collection no.: ANC 4149, CCM 8637, CCUG 67962, CNCTC 7530, CIP 111641

straininfo link

  • @ref: 91384
  • straininfo: 409236

literature

  • topic: Phylogeny
  • Pubmed-ID: 27392433
  • title: Acinetobacter pragensis sp. nov., found in soil and water ecosystems.
  • authors: Radolfova-Krizova L, Maixnerova M, Nemec A
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.001285
  • year: 2016
  • mesh: Acinetobacter/*classification/genetics/isolation & purification, Bacterial Typing Techniques, Base Composition, Czech Republic, DNA, Bacterial/genetics, Genes, Bacterial, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, *Water Microbiology
  • topic2: Transcriptome

Reference

@idauthorstitledoi/urljournalpubmedcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24937L. M. Radolfova-Krizova, Martina,Nemec, AlexandrAcinetobacter pragensis sp. nov., found in soil and water ecosystems10.1099/ijsem.0.001285IJSEM 66: 3897-3903 201627392433
63445Curators of the CCUGhttps://www.ccug.se/strain?id=67962Culture Collection University of Gothenburg (CCUG) (CCUG 67962)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
91384Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID409236.1
121949Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20111641Collection of Institut Pasteur (CIP 111641)