Strain identifier

BacDive ID: 13307

Type strain: Yes

Species: Lentzea roselyniae

Strain Designation: C81

Strain history: CGMCC 4.5537 <-- M. Goodfellow C81.

NCBI tax ID(s): 531940 (species)

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General

@ref: 17322

BacDive-ID: 13307

DSM-Number: 45481

keywords: 16S sequence, Bacteria, aerobe, Gram-positive

description: Lentzea roselyniae C81 is an aerobe, Gram-positive bacterium that was isolated from desert soil.

NCBI tax id

  • NCBI tax id: 531940
  • Matching level: species

strain history

@refhistory
17322<- NRRL; NRRL B-24708 <- M. Goodfellow, Univ. Newcastle, Newcastle upon Tyne, UK; C81
67770CGMCC 4.5537 <-- M. Goodfellow C81.

doi: 10.13145/bacdive13307.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Pseudonocardiales
  • family: Pseudonocardiaceae
  • genus: Lentzea
  • species: Lentzea roselyniae
  • full scientific name: Lentzea roselyniae (Okoro et al. 2010) Nouioui et al. 2018

  • synonyms

    • @ref: 20215
    • synonym: Lechevalieria roselyniae

@ref: 17322

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Pseudonocardiaceae

genus: Lentzea

species: Lentzea roselyniae

full scientific name: Lechevalieria roselyniae Okoro et al. 2010

strain designation: C81

type strain: yes

Morphology

cell morphology

  • @ref: 29271
  • gram stain: positive
  • motility: no

Culture and growth conditions

culture temp

@refgrowthtypetemperaturerange
29271positivegrowth20-40
29271positiveoptimum30mesophilic
67770positivegrowth28mesophilic

culture pH

@refabilitytypepHPH range
29271positivegrowth05-11alkaliphile
29271positiveoptimum7.5

Physiology and metabolism

oxygen tolerance

  • @ref: 29271
  • oxygen tolerance: aerobe

observation

  • @ref: 67770
  • observation: quinones: MK-9(H4)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
2927122599arabinose+carbon source
2927116947citrate+carbon source
2927123652dextrin+carbon source
2927128757fructose+carbon source
2927128087glycogen+carbon source
2927124996lactate+carbon source
2927130031succinate+carbon source
2927118222xylose+carbon source
292714853esculin+hydrolysis

metabolite production

  • @ref: 29271
  • Chebi-ID: 16136
  • metabolite: hydrogen sulfide
  • production: yes

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
17322desert soilAtacama Desert, Salar de AtacamaChileCHLMiddle and South America
67770Hyperarid soil from the Salar de Atacama region of the Atacama DesertChileCHLMiddle and South America

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Desert
#Environmental#Terrestrial#Soil
#Condition#Xerophilic

taxonmaps

  • @ref: 69479
  • File name: preview.99_34377.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_10;96_840;97_982;98_2059;99_34377&stattab=map
  • Last taxonomy: Lentzea
  • 16S sequence: EU551683
  • Sequence Identity:
  • Total samples: 121
  • soil counts: 55
  • aquatic counts: 2
  • animal counts: 4
  • plant counts: 60

Safety information

risk assessment

  • @ref: 17322
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 17322
  • description: Lechevalieria roselyniae strain C81 16S ribosomal RNA gene, partial sequence
  • accession: EU551683
  • length: 1476
  • database: ena
  • NCBI tax ID: 531940

External links

@ref: 17322

culture collection no.: DSM 45481, CGMCC 4.5537, NRRL B-24708, JCM 17494

straininfo link

  • @ref: 82507
  • straininfo: 406821

literature

  • topic: Phylogeny
  • Pubmed-ID: 19651742
  • title: Lechevalieria atacamensis sp. nov., Lechevalieria deserti sp. nov. and Lechevalieria roselyniae sp. nov., isolated from hyperarid soils.
  • authors: Okoro CK, Bull AT, Mutreja A, Rong X, Huang Y, Goodfellow M
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.009985-0
  • year: 2009
  • mesh: Actinomycetales/*classification/genetics/physiology, Base Sequence, Chile, Desert Climate, Molecular Sequence Data, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, *Soil Microbiology
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitleID_cross_referencepubmed
17322Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45481)https://www.dsmz.de/collection/catalogue/details/culture/DSM-45481
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
29271Barberan A, Caceres Velazquez H, Jones S, Fierer N.10.1128/mSphere.00237-17Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information2568828776041
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
82507Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID406821.1StrainInfo: A central database for resolving microbial strain identifiers