Strain identifier

BacDive ID: 132919

Type strain: No

Species: Wocania ichthyoenteri

Strain Designation: Th 106, Th106

Strain history: <- X.-H. Zhang, Ocean Univ. China, Dept. of Marine Biology, Qingdao, P. R. China <- K. Tang

NCBI tax ID(s): 1230531 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 24707

BacDive-ID: 132919

DSM-Number: 26286

keywords: 16S sequence, Bacteria, mesophilic

description: Wocania ichthyoenteri Th 106 is a mesophilic bacterium that was isolated from Paralichthys olivaceus.

NCBI tax id

  • NCBI tax id: 1230531
  • Matching level: species

strain history

  • @ref: 24707
  • history: <- X.-H. Zhang, Ocean Univ. China, Dept. of Marine Biology, Qingdao, P. R. China <- K. Tang

doi: 10.13145/bacdive132919.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Wocania
  • species: Wocania ichthyoenteri
  • full scientific name: Wocania ichthyoenteri (Zhang et al. 2013) He et al. 2020
  • synonyms

    • @ref: 20215
    • synonym: Flaviramulus ichthyoenteri

@ref: 24707

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Wocania

species: Wocania ichthyoenteri

full scientific name: Wocania ichthyoenteri (Zhang et al. 2013) He et al. 2020

strain designation: Th 106, Th106

type strain: no

Culture and growth conditions

culture medium

  • @ref: 24707
  • name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/514
  • composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

culture temp

  • @ref: 24707
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 24707
  • sample type: Paralichthys olivaceus
  • host species: Paralichthys olivaceus
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

  • Cat1: #Host
  • Cat2: #Fishes

taxonmaps

  • @ref: 69479
  • File name: preview.99_3500.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_107;96_1821;97_2185;98_2682;99_3500&stattab=map
  • Last taxonomy: Flaviramulus ichthyoenteri subclade
  • 16S sequence: JX431889
  • Sequence Identity:
  • Total samples: 1090
  • soil counts: 22
  • aquatic counts: 945
  • animal counts: 117
  • plant counts: 6

Safety information

risk assessment

  • @ref: 24707
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 24707
  • description: Flaviramulus sp. Th106 16S ribosomal RNA gene, partial sequence
  • accession: JX431889
  • length: 1484
  • database: ena
  • NCBI tax ID: 1230639

External links

@ref: 24707

culture collection no.: DSM 26286

straininfo link

  • @ref: 91197
  • straininfo: 397247

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24707Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-26286Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26286)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
91197Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID397247.1