Strain identifier
BacDive ID: 132919
Type strain:
Species: Wocania ichthyoenteri
Strain Designation: Th 106, Th106
Strain history: <- X.-H. Zhang, Ocean Univ. China, Dept. of Marine Biology, Qingdao, P. R. China <- K. Tang
NCBI tax ID(s): 1230531 (species)
General
@ref: 24707
BacDive-ID: 132919
DSM-Number: 26286
keywords: 16S sequence, Bacteria, mesophilic
description: Wocania ichthyoenteri Th 106 is a mesophilic bacterium that was isolated from Paralichthys olivaceus.
NCBI tax id
- NCBI tax id: 1230531
- Matching level: species
strain history
- @ref: 24707
- history: <- X.-H. Zhang, Ocean Univ. China, Dept. of Marine Biology, Qingdao, P. R. China <- K. Tang
doi: 10.13145/bacdive132919.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Flavobacteriaceae
- genus: Wocania
- species: Wocania ichthyoenteri
- full scientific name: Wocania ichthyoenteri (Zhang et al. 2013) He et al. 2020
synonyms
- @ref: 20215
- synonym: Flaviramulus ichthyoenteri
@ref: 24707
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Flavobacteriaceae
genus: Wocania
species: Wocania ichthyoenteri
full scientific name: Wocania ichthyoenteri (Zhang et al. 2013) He et al. 2020
strain designation: Th 106, Th106
type strain: no
Culture and growth conditions
culture medium
- @ref: 24707
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 24707
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 24707
- sample type: Paralichthys olivaceus
- host species: Paralichthys olivaceus
- country: China
- origin.country: CHN
- continent: Asia
isolation source categories
- Cat1: #Host
- Cat2: #Fishes
taxonmaps
- @ref: 69479
- File name: preview.99_3500.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_107;96_1821;97_2185;98_2682;99_3500&stattab=map
- Last taxonomy: Flaviramulus ichthyoenteri subclade
- 16S sequence: JX431889
- Sequence Identity:
- Total samples: 1090
- soil counts: 22
- aquatic counts: 945
- animal counts: 117
- plant counts: 6
Safety information
risk assessment
- @ref: 24707
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 24707
- description: Flaviramulus sp. Th106 16S ribosomal RNA gene, partial sequence
- accession: JX431889
- length: 1484
- database: ena
- NCBI tax ID: 1230639
External links
@ref: 24707
culture collection no.: DSM 26286
straininfo link
- @ref: 91197
- straininfo: 397247
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
24707 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-26286 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26286) | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
91197 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID397247.1 |