General

@ref: 24530

BacDive-ID: 132740

DSM-Number: 18117

keywords: 16S sequence, Bacteria, mesophilic

description: Hydrogenophaga temperata TR7-01 is a mesophilic bacterium that was isolated from Compost.

NCBI tax id

• NCBI tax id: 1904254
• Matching level: species

strain history

• @ref: 24530
• history: <- D.-C. Yang, Kyung Hee Univ., Seoul, Republic of Korea; TR7-01 <- J. W. Lee

doi: 10.13145/bacdive132740.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Betaproteobacteria
• order: Burkholderiales
• family: Comamonadaceae
• genus: Hydrogenophaga
• species: Hydrogenophaga temperata
• full scientific name: Hydrogenophaga temperata Kim et al. 2010

@ref: 24530

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Comamonadaceae

genus: Hydrogenophaga

species: Hydrogenophaga sp.

full scientific name: Hydrogenophaga sp.

strain designation: TR7-01

type strain: no

Culture and growth conditions

culture medium

• @ref: 24530
• name: R2A MEDIUM (DSMZ Medium 830)
• growth: yes
• link: https://mediadive.dsmz.de/medium/830
• composition: Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

culture temp

• @ref: 24530
• growth: positive
• type: growth
• temperature: 28
• range: mesophilic

Isolation, sampling and environmental information

isolation

• @ref: 24530
• sample type: Compost
• country: Republic of Korea
• origin.country: KOR
• continent: Asia

isolation source categories

• Cat1: #Engineered
• Cat2: #Biodegradation
• Cat3: #Composting

Sequence information

16S sequences

• @ref: 24530
• description: Hydrogenophaga temperata gene for 16S rRNA, partial sequence
• accession: AB166886
• length: 1471
• database: ena
• NCBI tax ID: 266129

External links

@ref: 24530

culture collection no.: DSM 18117

straininfo link

• @ref: 91044
• straininfo: 403343

literature

• topic: Phylogeny
• Pubmed-ID: 21282897
• title: Hydrogenophaga temperata sp. nov., a betaproteobacterium isolated from compost in Korea.
• authors: Kim YJ, Kim MK, Weon HY, Kim HB, Yang DC
• journal: J Gen Appl Microbiol
• DOI: 10.2323/jgam.56.419
• year: 2010
• mesh: *Bacterial Typing Techniques, Base Composition, Comamonadaceae/*classification/genetics/*isolation & purification/physiology, DNA, Bacterial/chemistry/genetics, Fatty Acids/analysis/chemistry, Genes, rRNA, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Sequence Analysis, DNA, *Soil Microbiology
• topic2: Genetics

Reference