Strain identifier

BacDive ID: 132693

Type strain: No

Species: Archaeoglobus fulgidus

Strain Designation: 7324

Strain history: <- T. Lien, University of Bergen, Norway; 7324 <- J. Beeder {1991}

NCBI tax ID(s): 1344584 (strain), 2234 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 24483

BacDive-ID: 132693

DSM-Number: 8774

keywords: genome sequence, Archaea, anaerobe, Gram-negative

description: Archaeoglobus fulgidus 7324 is an anaerobe, Gram-negative archaeon that was isolated from hot oil field water.

NCBI tax id

NCBI tax idMatching level
2234species
1344584strain

strain history

  • @ref: 24483
  • history: <- T. Lien, University of Bergen, Norway; 7324 <- J. Beeder {1991}

doi: 10.13145/bacdive132693.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/methanobacteriota
  • domain: Archaea
  • phylum: Methanobacteriota
  • class: Archaeoglobi
  • order: Archaeoglobales
  • family: Archaeoglobaceae
  • genus: Archaeoglobus
  • species: Archaeoglobus fulgidus
  • full scientific name: Archaeoglobus fulgidus Stetter 1988

@ref: 24483

domain: Archaea

phylum: Euryarchaeota

class: Archaeoglobi

order: Archaeoglobales

family: Archaeoglobaceae

genus: Archaeoglobus

species: Archaeoglobus fulgidus

full scientific name: Archaeoglobus fulgidus Stetter 1988

strain designation: 7324

type strain: no

Morphology

cell morphology

  • @ref: 69480
  • gram stain: negative
  • confidence: 97.65

Culture and growth conditions

culture medium

  • @ref: 24483
  • name: ARCHAEOGLOBUS MEDIUM (DSMZ Medium 399)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/399
  • composition: Name: ARCHAEOGLOBUS MEDIUM (DSMZ Medium 399) Composition: MgCl2 x 6 H2O 3.95257 g/l NaHCO3 2.96443 g/l Na-L-lactate 1.48221 g/l Na2S x 9 H2O 0.494071 g/l Yeast extract 0.494071 g/l KCl 0.335968 g/l NH4Cl 0.247036 g/l K2HPO4 0.13834 g/l MgSO4 x 7 H2O 0.0296443 g/l Nitrilotriacetic acid 0.0148221 g/l NaCl 0.00988142 g/l MnSO4 x H2O 0.00494071 g/l Fe(NH4)2(SO4)2 x 7 H2O 0.00197628 g/l CoSO4 x 7 H2O 0.00177866 g/l ZnSO4 x 7 H2O 0.00177866 g/l FeSO4 x 7 H2O 0.000988142 g/l CaCl2 x 2 H2O 0.000988142 g/l Sodium resazurin 0.000494071 g/l NiCl2 x 6 H2O 0.000296443 g/l AlK(SO4)2 x 12 H2O 0.000197628 g/l CuSO4 x 5 H2O 9.88142e-05 g/l Na2MoO4 x 2 H2O 9.88142e-05 g/l H3BO3 9.88142e-05 g/l Na2WO4 x 2 H2O 3.95257e-06 g/l Na2SeO3 x 5 H2O 2.96443e-06 g/l Distilled water

culture temp

@refgrowthtypetemperatureconfidence
24483positivegrowth80
6948099.724

Physiology and metabolism

oxygen tolerance

  • @ref: 69480
  • oxygen tolerance: anaerobe
  • confidence: 97.611

spore formation

  • @ref: 69480
  • spore formation: no
  • confidence: 94.028

Isolation, sampling and environmental information

isolation

  • @ref: 24483
  • sample type: hot oil field water
  • geographic location: North Sea
  • country: Norway
  • origin.country: NOR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Engineered#Industrial#Oil reservoir
#Environmental#Aquatic
#Condition#Thermophilic (>45°C)

Safety information

risk assessment

  • @ref: 24483
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Archaeoglobus fulgidus DSM 8774GCA_000734035completencbi1344584
66792Archaeoglobus fulgidus 73242528311132draftimg1344584
66792Archaeoglobus fulgidus DSM 87742588253768completeimg1344584
66792Archaeoglobus fulgidus DSM 87741344584.3completepatric1344584

GC content

@refGC-contentmethod
2448347.0thermal denaturation, midpoint method (Tm)
2448348.6sequence analysis

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingyes69no
motileno85.89no
flagellatedno96.888no
gram-positiveno97.65no
anaerobicyes97.611no
aerobicno95.693no
halophileno84.5no
spore-formingno94.028no
thermophileyes99.724yes
glucose-utilyes73.397no
glucose-fermentno76.624no

External links

@ref: 24483

culture collection no.: DSM 8774

straininfo link

  • @ref: 91001
  • straininfo: 48540

literature

  • topic: Genetics
  • Pubmed-ID: 29270248
  • title: Complete genome sequence analysis of Archaeoglobus fulgidus strain 7324 (DSM 8774), a hyperthermophilic archaeal sulfate reducer from a North Sea oil field.
  • authors: Birkeland NK, Schonheit P, Poghosyan L, Fiebig A, Klenk HP
  • journal: Stand Genomic Sci
  • DOI: 10.1186/s40793-017-0296-5
  • year: 2017
  • topic2: Transcriptome

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24483Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-8774Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 8774)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
91001Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID48540.1