Strain identifier

BacDive ID: 132566

Type strain: Yes

Species: Actinophytocola algeriensis

Strain Designation: MB20

Culture col. no.: DSM 46746, CECT 8960

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 5.0 (current version):
version 4.1:
version 4.0:
version 3.0:
version 2.1:
version 2.0:
version 1.0:
version 5.0 (current version)

General

@ref: 24355

BacDive-ID: 132566

DSM-Number: 46746

keywords: 16S sequence, genome sequence, Bacteria, aerobe, gram-positive

description: Actinophytocola algeriensis MB20 is an aerobe, gram-positive bacterium that was isolated from soil from a palm grove.

strain history: <- N. Sabaou, Alger, Algeria; MB20

doi: 10.13145/bacdive132566.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinobacteria
  • domain: Bacteria
  • phylum: Actinobacteria
  • class: Actinobacteria
  • order: Pseudonocardiales
  • family: Pseudonocardiaceae
  • genus: Actinophytocola
  • species: Actinophytocola algeriensis
  • full scientific name: Actinophytocola algeriensis Bouznada et al. 2016

@ref: 24355

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Pseudonocardiaceae

genus: Actinophytocola

species: Actinophytocola algeriensis

full scientific name: Actinophytocola algeriensis Bouznada et al. 2016

strain designation: MB20

type strain: yes

Morphology

cell morphology

  • @ref: 43602
  • gram stain: positive
  • motility: no

colony morphology

  • @ref: 43602
  • colony color: White
  • medium used: ISP 2

multimedia

  • @ref: 24355
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_46746.jpg
  • caption: Medium 535 28°C
  • license or copyright: (C) Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlink
43602ISP 2yes
24355TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium535.pdf

culture temp

@refgrowthtypetemperaturerange
43602positivegrowth20-40
43602nogrowth15psychrophilic
43602nogrowth45thermophilic
24355positivegrowth28mesophilic

culture pH

  • @ref: 43602
  • ability: positive
  • type: growth
  • pH: 6-9

Physiology and metabolism

oxygen tolerance

  • @ref: 43602
  • oxygen tolerance: aerobe

halophily

@refsaltgrowthtested relationconcentration
43602NaClpositivegrowth0-4 %(w/v)
43602NaClpositiveoptimum0-2 %(w/v)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4360217634D-glucose-carbon source
4360230849L-arabinose-carbon source
4360217716lactose-carbon source
4360237657methyl D-glucoside-carbon source
4360217268myo-inositol-carbon source
4360216634raffinose-carbon source
4360216235guanine-hydrolysis
4360217368hypoxanthine-hydrolysis
4360218186tyrosine-hydrolysis
4360215318xanthine-hydrolysis
4360217057cellobiose+carbon source
4360215824D-fructose+carbon source
4360212936D-galactose+carbon source
4360216899D-mannitol+carbon source
4360216988D-ribose+carbon source
4360217924D-sorbitol+carbon source
4360265327D-xylose+carbon source
4360262345L-rhamnose+carbon source
4360217306maltose+carbon source
4360228053melibiose+carbon source
4360217992sucrose+carbon source
4360227082trehalose+carbon source
43602casein+hydrolysis
436025291gelatin+hydrolysis

enzymes

@refvalueactivityec
43602nitrate reductase-1.7.99.4
43602catalase+1.11.1.6

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentlatitudelongitude
24355soil from a palm groveGhardaia, Berriane (32° 29' N 3° 41' E)AlgeriaDZAAfrica32.48333.6833
43602Saharan soil from Berriane palm groveGhardaia, Mzab regionAlgeriaDZAAfrica32.4833.683

isolation source categories

Cat1Cat2Cat3
#Engineered#Agriculture#Grove (Orchard)
#Host#Plants#Tree
#Environmental#Terrestrial#Desert
#Environmental#Terrestrial#Soil

Safety information

risk assessment

  • @ref: 24355
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 24355
  • description: Actinophytocola algeriensis strain MB20 16S ribosomal RNA gene, partial sequence
  • accession: KU242749
  • length: 1440
  • database: ena
  • NCBI tax ID: 1768010

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Actinophytocola algeriensis CECT 89602863340477permanentimg1768010
66792Actinophytocola algeriensis DSM 467462870820038permanentimg1768010

External links

@ref: 24355

culture collection no.: DSM 46746, CECT 8960

Reference

@idauthorstitledoi/urlcataloguejournal
20215D.Gleim, M.Kracht, N.Weiss et. al.Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes sincehttp://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html
24355Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-46746Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46746)
43602Khaoula Bouznada, Noureddine Bouras, Peter Schumann, Cathrin Spröer, Nasserdine Sabaou, Hans-Peter KlenkActinophytocola algeriensis sp. nov., an actinobacterium isolated from Saharan soil10.1099/ijsem.0.001136IJSEM 66: 2760-2765 2016
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes