Strain identifier

BacDive ID: 132531

Type strain: Yes

Species: Magnetospirillum moscoviense

Strain Designation: BB-1

Culture col. no.: DSM 29455, VKM B-2939

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General

@ref: 24320

BacDive-ID: 132531

DSM-Number: 29455

keywords: Bacteria, 16S sequence, genome sequence, microaerophile, motile, spiral-shaped

description: Magnetospirillum moscoviense BB-1 is a microaerophile, motile, spiral-shaped bacterium that was isolated from freshwater sediment from a river.

strain history: <- M. Dziuba, RAS, Centre Bioengineering, Russia; BB-1 <- V.V. Koziaeva {2013}

doi: 10.13145/bacdive132531.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Alphaproteobacteria
  • order: Rhodospirillales
  • family: Rhodospirillaceae
  • genus: Magnetospirillum
  • species: Magnetospirillum moscoviense
  • full scientific name: Magnetospirillum moscoviense Dziuba et al. 2016

@ref: 24320

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhodospirillales

family: Rhodospirillaceae

genus: Magnetospirillum

species: Magnetospirillum moscoviense

full scientific name: Magnetospirillum moscoviense Dziuba et al. 2016

strain designation: BB-1

type strain: yes

Morphology

cell morphology

  • @ref: 43653
  • cell length: 2-4 µm
  • cell width: 0.3 µm
  • cell shape: spiral-shaped
  • motility: yes
  • flagellum arrangement: lophotrichous

Culture and growth conditions

culture medium

  • @ref: 24320
  • name: MAGNETOSPIRILLUM MEDIUM (DSMZ Medium 380), microaerophilic
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium380.pdf

culture temp

@refgrowthtypetemperaturerange
43653positivegrowth18-38
43653positiveoptimum25-32mesophilic
24320positivegrowth28mesophilic

culture pH

  • @ref: 43653
  • ability: positive
  • type: optimum
  • pH: 6.5-7

Physiology and metabolism

oxygen tolerance

  • @ref: 43653
  • oxygen tolerance: microaerophile

halophily

  • @ref: 43653
  • salt: NaCl
  • growth: positive
  • tested relation: growth
  • concentration: 0-1 %(w/v)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4365316947citrate-assimilation
4365317968butyrate+growth
4365317754glycerol+growth
4365317272propionate+growth
4365330929tartrate+growth

enzymes

@refvalueactivityec
43653catalase-1.11.1.6
43653cytochrome oxidase+1.9.3.1

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentlatitudelongitude
24320freshwater sediment from a riverMoscow, Moskva RiverRussiaRUSEurope55.792737.4099
43653Sediments of the Moskva riverMoscowRussiaRUSEurope55.79237.409

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Freshwater
#Environmental#Aquatic#River (Creek)
#Environmental#Aquatic#Sediment

Safety information

risk assessment

  • @ref: 24320
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 24320
  • description: Magnetospirillum moscoviense strain BB-1 16S ribosomal RNA gene, complete sequence
  • accession: KF712468
  • length: 1445
  • database: ena
  • NCBI tax ID: 1437059

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Magnetospirillum moscoviense BB-1GCA_001650635contigncbi1437059
66792Magnetospirillum moscoviense strain BB-11437059.5wgspatric1437059

GC content

@refGC-contentmethod
4365365.2genome sequence analysis
2432065.2sequence analysis

External links

@ref: 24320

culture collection no.: DSM 29455, VKM B-2939

Reference

@idauthorstitledoi/urlcataloguejournal
20215D.Gleim, M.Kracht, N.Weiss et. al.Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes sincehttp://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html
24320Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-29455Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 29455)
43653Marina Dziuba, Veronika Koziaeva, Denis Grouzdev, Ekaterina Burganskaya, Roman Baslerov, Tatjana Kolganova, Alexander Chernyadyev, Georgy Osipov, Ekaterina Andrianova, Vladimir Gorlenko, Boris KuznetsovMagnetospirillum caucaseum sp. nov., Magnetospirillum marisnigri sp. nov. and Magnetospirillum moscoviense sp. nov., freshwater magnetotactic bacteria isolated from three distinct geographical locations in European Russia10.1099/ijsem.0.000994IJSEM 66: 2069-2077 2016
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes