Strain identifier

BacDive ID: 132496

Type strain: No

Species: Bacillus niameyensis

Strain Designation: BN1

Strain history: <- S. Khelaifia, Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes; SIT3

NCBI tax ID(s): 1522308 (species)

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General

@ref: 24285

BacDive-ID: 132496

DSM-Number: 29725

keywords: 16S sequence, Bacteria, mesophilic

description: Bacillus niameyensis BN1 is a mesophilic bacterium that was isolated from human stool, child with kwashiorkor living in Niamey.

NCBI tax id

  • NCBI tax id: 1522308
  • Matching level: species

strain history

  • @ref: 24285
  • history: <- S. Khelaifia, Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes; SIT3

doi: 10.13145/bacdive132496.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Bacillus
  • species: Bacillus niameyensis
  • full scientific name: Bacillus niameyensis Tidjani Alou et al. 2015

@ref: 24285

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Bacillus

species: Bacillus niameyensis

full scientific name: Bacillus niameyensis

strain designation: BN1

type strain: no

Culture and growth conditions

culture medium

  • @ref: 24285
  • name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/220
  • composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

culture temp

  • @ref: 24285
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 24285
  • sample type: human stool, child with kwashiorkor living in Niamey
  • country: Niger
  • origin.country: NER
  • continent: Africa

isolation source categories

Cat1Cat2Cat3
#Host#Human#Child
#Host Body Product#Gastrointestinal tract#Feces (Stool)

taxonmaps

  • @ref: 69479
  • File name: preview.99_562.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_357;97_399;98_458;99_562&stattab=map
  • Last taxonomy: Bacillus niameyensis subclade
  • 16S sequence: LK985389
  • Sequence Identity:
  • Total samples: 1731
  • soil counts: 681
  • aquatic counts: 160
  • animal counts: 790
  • plant counts: 100

Sequence information

16S sequences

  • @ref: 24285
  • description: Bacillus sp. SIT3 partial 16S rRNA gene, isolate SIT3
  • accession: LK985389
  • length: 1501
  • database: ena
  • NCBI tax ID: 1522308

External links

@ref: 24285

culture collection no.: DSM 29725, CSUR P1266, SIT 3

literature

  • topic: Phylogeny
  • Pubmed-ID: 27076913
  • title: Bacillus niameyensis sp. nov., a new bacterial species isolated from human gut.
  • authors: Tidjani Alou M, Rathored J, Traore SI, Khelaifia S, Michelle C, Brah S, Diallo BA, Raoult D, Lagier JC
  • journal: New Microbes New Infect
  • DOI: 10.1016/j.nmni.2015.09.011
  • year: 2015

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24285Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-29725Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 29725)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/