Strain identifier
BacDive ID: 132496
Type strain:
Species: Bacillus niameyensis
Strain Designation: BN1
Strain history: <- S. Khelaifia, Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes; SIT3
NCBI tax ID(s): 1522308 (species)
General
@ref: 24285
BacDive-ID: 132496
DSM-Number: 29725
keywords: 16S sequence, Bacteria, mesophilic
description: Bacillus niameyensis BN1 is a mesophilic bacterium that was isolated from human stool, child with kwashiorkor living in Niamey.
NCBI tax id
- NCBI tax id: 1522308
- Matching level: species
strain history
- @ref: 24285
- history: <- S. Khelaifia, Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes; SIT3
doi: 10.13145/bacdive132496.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Bacillus
- species: Bacillus niameyensis
- full scientific name: Bacillus niameyensis Tidjani Alou et al. 2015
@ref: 24285
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Bacillus
species: Bacillus niameyensis
full scientific name: Bacillus niameyensis
strain designation: BN1
type strain: no
Culture and growth conditions
culture medium
- @ref: 24285
- name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
- growth: yes
- link: https://mediadive.dsmz.de/medium/220
- composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
culture temp
- @ref: 24285
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 24285
- sample type: human stool, child with kwashiorkor living in Niamey
- country: Niger
- origin.country: NER
- continent: Africa
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | #Child |
#Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
taxonmaps
- @ref: 69479
- File name: preview.99_562.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_357;97_399;98_458;99_562&stattab=map
- Last taxonomy: Bacillus niameyensis subclade
- 16S sequence: LK985389
- Sequence Identity:
- Total samples: 1731
- soil counts: 681
- aquatic counts: 160
- animal counts: 790
- plant counts: 100
Sequence information
16S sequences
- @ref: 24285
- description: Bacillus sp. SIT3 partial 16S rRNA gene, isolate SIT3
- accession: LK985389
- length: 1501
- database: ena
- NCBI tax ID: 1522308
External links
@ref: 24285
culture collection no.: DSM 29725, CSUR P1266, SIT 3
literature
- topic: Phylogeny
- Pubmed-ID: 27076913
- title: Bacillus niameyensis sp. nov., a new bacterial species isolated from human gut.
- authors: Tidjani Alou M, Rathored J, Traore SI, Khelaifia S, Michelle C, Brah S, Diallo BA, Raoult D, Lagier JC
- journal: New Microbes New Infect
- DOI: 10.1016/j.nmni.2015.09.011
- year: 2015
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
24285 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-29725 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 29725) | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |