Strain identifier

BacDive ID: 132475

Type strain: Yes

Species: Streptosporangium corydalis

Strain Designation: NEAU-Y6

Strain history: CGMCC 4.7150 <-- W. Xiang and X. Wang; Northeast Agric. Univ., China; NEAU-Y6.

NCBI tax ID(s): 1441878 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 24264

BacDive-ID: 132475

DSM-Number: 46722

keywords: 16S sequence, Bacteria, mesophilic

description: Streptosporangium corydalis NEAU-Y6 is a mesophilic bacterium that was isolated from root of Corydalis yanhusuo L..

NCBI tax id

  • NCBI tax id: 1441878
  • Matching level: species

strain history

@refhistory
24264<- C. Liu, School of Life Science, Harbin, China; NEAU-Y6 <- H. Liu, School of Life Science, Harbin, China
67770CGMCC 4.7150 <-- W. Xiang and X. Wang; Northeast Agric. Univ., China; NEAU-Y6.

doi: 10.13145/bacdive132475.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Streptosporangiales
  • family: Streptosporangiaceae
  • genus: Streptosporangium
  • species: Streptosporangium corydalis
  • full scientific name: Streptosporangium corydalis Fang et al. 2016

@ref: 24264

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptosporangiaceae

genus: Streptosporangium

species: Streptosporangium corydalis

full scientific name: Streptosporangium corydalis Fang et al. 2016

strain designation: NEAU-Y6

type strain: yes

Morphology

multimedia

  • @ref: 24264
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_46722.jpg
  • caption: Medium 65 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
24264ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf
24264GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
24264positivegrowth28mesophilic
67770positivegrowth28mesophilic

Physiology and metabolism

observation

  • @ref: 67770
  • observation: quinones: MK-9(H2), MK-9(H0), MK-9(H4), MK-8(H2)

Isolation, sampling and environmental information

isolation

@refsample typehost speciesgeographic locationcountryorigin.countrycontinentlatitudelongitude
24264root of Corydalis yanhusuo L.Corydalis yanhusuoHeilongjiang Province, Harbin, Wuchang, National Forest Park of Fenghuang Mountain (42° 21' N, 127° 99' E)ChinaCHNAsia42.35128.65
67770Root of Corydalis yanhusuo L. from Fenghuang Mountain in WuchangCorydalis yanhusuoHeilongjiang Province, north ChinaChinaCHNAsia

isolation source categories

Cat1Cat2Cat3
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Root (Rhizome)

Safety information

risk assessment

  • @ref: 24264
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 24264
  • description: Streptosporangium corydalis strain NEAU-Y6 16S ribosomal RNA gene, partial sequence
  • accession: KF956806
  • length: 1516
  • database: ena
  • NCBI tax ID: 1441878

GC content

@refGC-contentmethod
2426470.9thermal denaturation, midpoint method (Tm)
6777070.7-71.1thermal denaturation, midpoint method (Tm)

External links

@ref: 24264

culture collection no.: DSM 46722, CGMCC 4.7150, JCM 33408

straininfo link

  • @ref: 90809
  • straininfo: 406873

literature

  • topic: Phylogeny
  • Pubmed-ID: 26767659
  • title: Streptosporangium lutulentum sp. nov., Streptosporangium fenghuangense sp. nov. and Streptosporangium corydalis sp. nov., three novel actinobacterial species isolated from National Forest Park of Fenghuang Mountain.
  • authors: Fang B, Liu H, Pan T, Liu C, Guan X, He H, Yan K, Li J, Xiang W, Wang X
  • journal: Antonie Van Leeuwenhoek
  • DOI: 10.1007/s10482-016-0650-4
  • year: 2016
  • mesh: Actinobacteria/*classification/genetics/isolation & purification/ultrastructure, Bacterial Typing Techniques, Base Composition, *Environment, *Environmental Microbiology, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
  • topic2: Transcriptome

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24264Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-46722Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46722)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
90809Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID406873.1