General

@ref: 24255

BacDive-ID: 132466

DSM-Number: 100188

keywords: genome sequence, 16S sequence, Bacteria, mesophilic

description: Beduini massiliensis GM1 is a mesophilic bacterium that was isolated from stool specimen of healthy female nomadic Bedouin.

NCBI tax id

• NCBI tax id: 1585974
• Matching level: species

strain history

• @ref: 24255
• history: <- S. Khelaifia, Timone Hospital, Marseille, France; GM1 <- Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes {2014}

doi: 10.13145/bacdive132466.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacillota
• domain: Bacteria
• phylum: Bacillota
• class: Clostridia
• order: Eubacteriales
• family: Clostridiaceae
• genus: Beduini
• species: Beduini massiliensis
• full scientific name: Beduini massiliensis Mourembou et al. 2015

@ref: 24255

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Clostridiaceae

genus: Beduini

species: Beduini massiliensis

full scientific name: Beduini massiliensis Mourembou et al. 2015

strain designation: GM1

type strain: no

Culture and growth conditions

culture medium

• @ref: 24255
• name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)
• growth: yes
• link: https://mediadive.dsmz.de/medium/110
• composition: Name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l K2HPO4 5.0 g/l Yeast extract 5.0 g/l D-Glucose 4.0 g/l Starch 1.0 g/l Maltose 1.0 g/l Cellobiose 1.0 g/l L-Cysteine HCl 0.5 g/l Ethanol 0.19 g/l Vitamin K3 0.05 g/l Hemin 0.005 g/l Sodium resazurin 0.0005 g/l Vitamin K1 NaOH Distilled water

culture temp

• @ref: 24255
• growth: positive
• type: growth
• temperature: 37
• range: mesophilic

Isolation, sampling and environmental information

isolation

• @ref: 24255
• sample type: stool specimen of healthy female nomadic Bedouin
• geographic location: Asir region
• country: Saudi Arabia
• origin.country: SAU
• continent: Asia

isolation source categories

taxonmaps

• @ref: 69479
• File name: preview.99_6000.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_16683;96_2861;97_3518;98_4452;99_6000&stattab=map
• Last taxonomy: Beduini massiliensis subclade
• 16S sequence: LN713275
• Sequence Identity:
• Total samples: 6570
• soil counts: 85
• aquatic counts: 137
• animal counts: 6297
• plant counts: 51

Sequence information

16S sequences

• @ref: 24255
• description: Clostridiaceae bacterium GM1 partial 16S rRNA gene, strain GM1
• accession: LN713275
• length: 1489
• database: ena
• NCBI tax ID: 1585974

Genome sequences

• @ref: 66792
• description: Beduini massiliensis GM1
• accession: GCA_000829905
• assembly level: contig
• database: ncbi
• NCBI tax ID: 1585974

GC content

• @ref: 24255
• GC-content: 35.9
• method: sequence analysis

Genome-based predictions

predictions

External links

@ref: 24255

culture collection no.: DSM 100188, CSUR P1440

literature

• topic: Genetics
• Pubmed-ID: 26669711
• title: Rise of Microbial Culturomics: Noncontiguous Finished Genome Sequence and Description of Beduini massiliensis gen. nov., sp. nov.
• authors: Mourembou G, Yasir M, Azhar EI, Lagier JC, Bibi F, Jiman-Fatani AA, Helmy N, Robert C, Rathored J, Fournier PE, Raoult D, Million M
• journal: OMICS
• DOI: 10.1089/omi.2015.0143
• year: 2015
• mesh: Adult, Bacillus/*classification/drug effects/*genetics/ultrastructure, Female, *Gastrointestinal Microbiome, Genome, Bacterial, Genomics, Humans, *Metagenome, *Metagenomics/methods, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics
• topic2: Phylogeny

Reference