Strain identifier

BacDive ID: 132458

Type strain: Yes

Species: Brotonthovivens ammoniilytica

Strain Designation: Sanger 109, Sanger_109

Strain history: <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; Sanger_109

NCBI tax ID(s): 2049040 (species)

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General

@ref: 24247

BacDive-ID: 132458

DSM-Number: 102148

keywords: genome sequence, Bacteria, mesophilic

description: Brotonthovivens ammoniilytica Sanger 109 is a mesophilic bacterium that was isolated from faeces from healthy human.

NCBI tax id

  • NCBI tax id: 2049040
  • Matching level: species

strain history

  • @ref: 24247
  • history: <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; Sanger_109

doi: 10.13145/bacdive132458.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Lachnospiraceae
  • genus: Brotonthovivens
  • species: Brotonthovivens ammoniilytica
  • full scientific name: Brotonthovivens ammoniilytica Hitch et al. 2022

@ref: 24247

domain: Bacteria

phylum: Bacillota

class: Clostridia

order: Eubacteriales

family: Lachnospiraceae

genus: Brotonthovivens

species: Brotonthovivens ammoniilytica

full scientific name: Brotonthovivens ammoniilytica Hitch et al. 2022

strain designation: Sanger 109, Sanger_109

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 24247
  • name: YCFA-MEDIUM (MODIFIED) (DSMZ Medium 1611)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1611
  • composition: Name: YCFA MEDIUM (modified) (DSMZ Medium 1611) Composition: Casitone 10.0 g/l Glucose 5.0 g/l NaHCO3 4.0 g/l Yeast extract 2.5 g/l Acetic acid 1.78695 g/l L-Cysteine HCl 1.0 g/l NaCl 0.9 g/l Propionic acid 0.62559 g/l KH2PO4 0.45 g/l K2HPO4 0.45 g/l CaCl2 x 2 H2O 0.09 g/l n-Valeric acid 0.08451 g/l iso-Valeric acid 0.0837899 g/l iso-Butyric acid 0.07695 g/l MgSO4 x 7 H2O 0.045 g/l Hemin 0.01 g/l Resazurin 0.001 g/l Pyridoxine hydrochloride 0.0001 g/l Nicotinic acid 5e-05 g/l Thiamine-HCl x 2 H2O 5e-05 g/l Riboflavin 5e-05 g/l D-Calcium pantothenate 5e-05 g/l p-Aminobenzoic acid 5e-05 g/l Lipoic acid 5e-05 g/l Folic acid 2e-05 g/l Biotin 2e-05 g/l Vitamin B12 1e-06 g/l Distilled water

culture temp

  • @ref: 24247
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 24247
  • sample type: faeces from healthy human
  • geographic location: Cambridgeshire
  • country: United Kingdom
  • origin.country: GBR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Gastrointestinal tract#Feces (Stool)

Sequence information

Genome sequences

  • @ref: 66792
  • description: Brotonthovivens ammoniilytica Sanger_109
  • accession: GCA_025566885
  • assembly level: scaffold
  • database: ncbi
  • NCBI tax ID: 2981725

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
motileno94.019no
flagellatedno96.318no
gram-positiveyes73.144no
anaerobicyes99.726no
aerobicno98.39no
halophileno83.465no
spore-formingno70.853no
glucose-fermentyes51.951no
thermophileno93.853yes
glucose-utilyes87.748no

External links

@ref: 24247

culture collection no.: DSM 102148, JCM 34815

straininfo link

  • @ref: 90795
  • straininfo: 407203

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24247Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-102148Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102148)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
90795Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID407203.1