Strain identifier
BacDive ID: 132442
Type strain:
Species: Streptomyces arcticus
Strain Designation: ZLN 234
Strain history: <- L. Zhang, Wuhan Univ., China; ZLN 234 <- K. Hong
NCBI tax ID(s): 1705607 (species)
General
@ref: 24231
BacDive-ID: 132442
DSM-Number: 100713
keywords: 16S sequence, Bacteria, aerobe, spore-forming, Gram-positive
description: Streptomyces arcticus ZLN 234 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from frozen soil from the foreland of a glacier.
NCBI tax id
- NCBI tax id: 1705607
- Matching level: species
strain history
- @ref: 24231
- history: <- L. Zhang, Wuhan Univ., China; ZLN 234 <- K. Hong
doi: 10.13145/bacdive132442.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces arcticus
- full scientific name: Streptomyces arcticus Zhang et al. 2016
@ref: 24231
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces arcticus
full scientific name: Streptomyces arcticus Zhang et al. 2016
strain designation: ZLN 234
type strain: yes
Morphology
cell morphology
- @ref: 43755
- gram stain: positive
- motility: no
colony morphology
- @ref: 43755
- colony color: Grey
- incubation period: 14-21 days
- medium used: Mineral agar 1 Gause medium
multimedia
- @ref: 24231
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_100713.jpg
- caption: Medium 65 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
24231 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf | |
43755 | Mineral agar 1 Gause medium | yes | ||
24231 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
43755 | positive | growth | 4-40 | |
43755 | positive | optimum | 28 | mesophilic |
24231 | positive | growth | 28 | mesophilic |
culture pH
@ref | ability | type | pH | PH range |
---|---|---|---|---|
43755 | positive | growth | 5-11 | alkaliphile |
43755 | positive | optimum | 7 |
Physiology and metabolism
oxygen tolerance
- @ref: 43755
- oxygen tolerance: aerobe
spore formation
- @ref: 43755
- spore description: smooth-surfaced (0.3-0.5 x 1.5-2.2 µm)
- type of spore: spore
- spore formation: yes
halophily
@ref | salt | growth | tested relation | concentration | halophily level |
---|---|---|---|---|---|
43755 | NaCl | positive | growth | 0-3 %(w/v) | |
43755 | NaCl | positive | optimum | 0 %(w/v) | non-halophilic |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
43755 | 85146 | carboxymethylcellulose | - | degradation |
43755 | 17632 | nitrate | - | reduction |
43755 | 15963 | ribitol | + | assimilation |
43755 | 36219 | alpha-lactose | + | assimilation |
43755 | 17057 | cellobiose | + | assimilation |
43755 | 15824 | D-fructose | + | assimilation |
43755 | 17634 | D-glucose | + | assimilation |
43755 | 16899 | D-mannitol | + | assimilation |
43755 | 16024 | D-mannose | + | assimilation |
43755 | 16988 | D-ribose | + | assimilation |
43755 | 65327 | D-xylose | + | assimilation |
43755 | 17268 | myo-inositol | + | assimilation |
43755 | 30849 | L-arabinose | + | assimilation |
43755 | 62345 | L-rhamnose | + | assimilation |
43755 | 17306 | maltose | + | assimilation |
43755 | 16634 | raffinose | + | assimilation |
43755 | 17814 | salicin | + | assimilation |
43755 | 27082 | trehalose | + | assimilation |
43755 | 4853 | esculin | + | hydrolysis |
43755 | 5291 | gelatin | + | hydrolysis |
43755 | 28017 | starch | + | hydrolysis |
43755 | 15428 | glycine | + | nitrogen source |
43755 | L-alanine 4-nitroanilide | + | nitrogen source | |
43755 | 16467 | L-arginine | + | nitrogen source |
43755 | 17196 | L-asparagine | + | nitrogen source |
43755 | 17561 | L-cysteine | + | nitrogen source |
43755 | 18050 | L-glutamine | + | nitrogen source |
43755 | 15971 | L-histidine | + | nitrogen source |
43755 | 17191 | L-isoleucine | + | nitrogen source |
43755 | 15603 | L-leucine | + | nitrogen source |
43755 | 18019 | L-lysine | + | nitrogen source |
43755 | 16643 | L-methionine | + | nitrogen source |
43755 | 17295 | L-phenylalanine | + | nitrogen source |
43755 | 17203 | L-proline | + | nitrogen source |
43755 | 17115 | L-serine | + | nitrogen source |
43755 | 16857 | L-threonine | + | nitrogen source |
43755 | 16828 | L-tryptophan | + | nitrogen source |
43755 | 16414 | L-valine | + | nitrogen source |
43755 | 12936 | D-galactose | +/- | assimilation |
43755 | 28053 | melibiose | +/- | assimilation |
43755 | 30911 | sorbitol | +/- | assimilation |
antibiotic resistance
@ref | ChEBI | metabolite | is antibiotic | is sensitive | sensitivity conc. | is resistant | resistance conc. |
---|---|---|---|---|---|---|---|
43755 | 48923 | erythromycin | yes | yes | 15 µg (disc) | ||
43755 | 27902 | tetracycline | yes | yes | 30 µg (disc) | ||
43755 | 17833 | gentamicin | yes | yes | 10 µg (disc) | ||
43755 | 28971 | ampicillin | yes | yes | 10 µg (disc) | ||
43755 | 28077 | rifampicin | yes | yes | 5 µg (disc) | ||
43755 | 17076 | streptomycin | yes | yes | 10 µg (disc) | ||
43755 | 6104 | kanamycin | yes | yes | 30 µg (disc) | ||
43755 | 17698 | chloramphenicol | yes | yes | 30 µg (disc) |
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
43755 | 16136 | hydrogen sulfide | yes |
43755 | 89634 | melanin | yes |
enzymes
- @ref: 43755
- value: catalase
- activity: +
- ec: 1.11.1.6
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent | latitude | longitude |
---|---|---|---|---|---|---|---|
24231 | frozen soil from the foreland of a glacier | High Arctic (78° 53' 37'' N 12° 09' 50'' E) | Norway | NOR | Europe | 78.8936 | 12.1639 |
43755 | The foreland of a glacier in the High Arctic | Ny-Alesund, Spitzbergen | Norway | NOR | Europe | 78.893 | 12.163 |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Terrestrial | #Soil |
#Environmental | #Terrestrial | #Glacier |
Safety information
risk assessment
- @ref: 24231
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 24231
- description: Streptomyces arcticus strain ZLN234 16S ribosomal RNA gene, partial sequence
- accession: KR013752
- length: 1489
- database: ena
- NCBI tax ID: 1705607
GC content
- @ref: 24231
- GC-content: 77.5
- method: high performance liquid chromatography (HPLC)
External links
@ref: 24231
culture collection no.: DSM 100713, CCTCC AA 2015005
straininfo link
- @ref: 90780
- straininfo: 401897
literature
- topic: Phylogeny
- Pubmed-ID: 26790712
- title: Streptomyces arcticus sp. nov., isolated from frozen soil.
- authors: Zhang L, Ruan C, Peng F, Deng Z, Hong K
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijsem.0.000907
- year: 2016
Reference
@id | authors | title | doi/url | catalogue | journal | pubmed |
---|---|---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
24231 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-100713 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 100713) | |||
43755 | Li Zhang, Changying Ruan, Fang Peng, Zixin Deng, Kui Hong | Streptomyces arcticus sp. nov., isolated from frozen soil | 10.1099/ijsem.0.000907 | IJSEM 66: 1482-1487 2016 | 26790712 | |
90780 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID401897.1 |