Strain identifier

BacDive ID: 132442

Type strain: Yes

Species: Streptomyces arcticus

Strain Designation: ZLN 234

Strain history: <- L. Zhang, Wuhan Univ., China; ZLN 234 <- K. Hong

NCBI tax ID(s): 1705607 (species)

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General

@ref: 24231

BacDive-ID: 132442

DSM-Number: 100713

keywords: 16S sequence, Bacteria, aerobe, spore-forming, Gram-positive

description: Streptomyces arcticus ZLN 234 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from frozen soil from the foreland of a glacier.

NCBI tax id

  • NCBI tax id: 1705607
  • Matching level: species

strain history

  • @ref: 24231
  • history: <- L. Zhang, Wuhan Univ., China; ZLN 234 <- K. Hong

doi: 10.13145/bacdive132442.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces arcticus
  • full scientific name: Streptomyces arcticus Zhang et al. 2016

@ref: 24231

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces arcticus

full scientific name: Streptomyces arcticus Zhang et al. 2016

strain designation: ZLN 234

type strain: yes

Morphology

cell morphology

  • @ref: 43755
  • gram stain: positive
  • motility: no

colony morphology

  • @ref: 43755
  • colony color: Grey
  • incubation period: 14-21 days
  • medium used: Mineral agar 1 Gause medium

multimedia

  • @ref: 24231
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_100713.jpg
  • caption: Medium 65 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
24231ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf
43755Mineral agar 1 Gause mediumyes
24231GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
43755positivegrowth4-40
43755positiveoptimum28mesophilic
24231positivegrowth28mesophilic

culture pH

@refabilitytypepHPH range
43755positivegrowth5-11alkaliphile
43755positiveoptimum7

Physiology and metabolism

oxygen tolerance

  • @ref: 43755
  • oxygen tolerance: aerobe

spore formation

  • @ref: 43755
  • spore description: smooth-surfaced (0.3-0.5 x 1.5-2.2 µm)
  • type of spore: spore
  • spore formation: yes

halophily

@refsaltgrowthtested relationconcentrationhalophily level
43755NaClpositivegrowth0-3 %(w/v)
43755NaClpositiveoptimum0 %(w/v)non-halophilic

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4375585146carboxymethylcellulose-degradation
4375517632nitrate-reduction
4375515963ribitol+assimilation
4375536219alpha-lactose+assimilation
4375517057cellobiose+assimilation
4375515824D-fructose+assimilation
4375517634D-glucose+assimilation
4375516899D-mannitol+assimilation
4375516024D-mannose+assimilation
4375516988D-ribose+assimilation
4375565327D-xylose+assimilation
4375517268myo-inositol+assimilation
4375530849L-arabinose+assimilation
4375562345L-rhamnose+assimilation
4375517306maltose+assimilation
4375516634raffinose+assimilation
4375517814salicin+assimilation
4375527082trehalose+assimilation
437554853esculin+hydrolysis
437555291gelatin+hydrolysis
4375528017starch+hydrolysis
4375515428glycine+nitrogen source
43755L-alanine 4-nitroanilide+nitrogen source
4375516467L-arginine+nitrogen source
4375517196L-asparagine+nitrogen source
4375517561L-cysteine+nitrogen source
4375518050L-glutamine+nitrogen source
4375515971L-histidine+nitrogen source
4375517191L-isoleucine+nitrogen source
4375515603L-leucine+nitrogen source
4375518019L-lysine+nitrogen source
4375516643L-methionine+nitrogen source
4375517295L-phenylalanine+nitrogen source
4375517203L-proline+nitrogen source
4375517115L-serine+nitrogen source
4375516857L-threonine+nitrogen source
4375516828L-tryptophan+nitrogen source
4375516414L-valine+nitrogen source
4375512936D-galactose+/-assimilation
4375528053melibiose+/-assimilation
4375530911sorbitol+/-assimilation

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.is resistantresistance conc.
4375548923erythromycinyesyes15 µg (disc)
4375527902tetracyclineyesyes30 µg (disc)
4375517833gentamicinyesyes10 µg (disc)
4375528971ampicillinyesyes10 µg (disc)
4375528077rifampicinyesyes5 µg (disc)
4375517076streptomycinyesyes10 µg (disc)
437556104kanamycinyesyes30 µg (disc)
4375517698chloramphenicolyesyes30 µg (disc)

metabolite production

@refChebi-IDmetaboliteproduction
4375516136hydrogen sulfideyes
4375589634melaninyes

enzymes

  • @ref: 43755
  • value: catalase
  • activity: +
  • ec: 1.11.1.6

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentlatitudelongitude
24231frozen soil from the foreland of a glacierHigh Arctic (78° 53' 37'' N 12° 09' 50'' E)NorwayNOREurope78.893612.1639
43755The foreland of a glacier in the High ArcticNy-Alesund, SpitzbergenNorwayNOREurope78.89312.163

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Environmental#Terrestrial#Glacier

Safety information

risk assessment

  • @ref: 24231
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 24231
  • description: Streptomyces arcticus strain ZLN234 16S ribosomal RNA gene, partial sequence
  • accession: KR013752
  • length: 1489
  • database: ena
  • NCBI tax ID: 1705607

GC content

  • @ref: 24231
  • GC-content: 77.5
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 24231

culture collection no.: DSM 100713, CCTCC AA 2015005

straininfo link

  • @ref: 90780
  • straininfo: 401897

literature

  • topic: Phylogeny
  • Pubmed-ID: 26790712
  • title: Streptomyces arcticus sp. nov., isolated from frozen soil.
  • authors: Zhang L, Ruan C, Peng F, Deng Z, Hong K
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.000907
  • year: 2016

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24231Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-100713Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 100713)
43755Li Zhang, Changying Ruan, Fang Peng, Zixin Deng, Kui HongStreptomyces arcticus sp. nov., isolated from frozen soil10.1099/ijsem.0.000907IJSEM 66: 1482-1487 201626790712
90780Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID401897.1