Archive BacDiveID:10.13145/bacdive132435.20230509.8.1

Strain identifier

BacDive ID: 132435

Type strain:

Species: Pseudomonas helleri

Strain Designation: WS 4995

Strain history: <- M. Wenning, TU Munich, ZIEL, Freising-Weihenstephan, Germany; WS4995 <- M. Freiherr von Neubeck, ZIEL

NCBI tax ID(s): 1608996 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 24224

BacDive-ID: 132435

DSM-Number: 29141

keywords: 16S sequence, Bacteria, mesophilic

description: Pseudomonas helleri WS 4995 is a mesophilic bacterium that was isolated from raw cow’s milk.

NCBI tax id

NCBI tax id: 1608996
Matching level: species

strain history

@ref: 24224
history: <- M. Wenning, TU Munich, ZIEL, Freising-Weihenstephan, Germany; WS4995 <- M. Freiherr von Neubeck, ZIEL

doi: 10.13145/bacdive132435.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/pseudomonadota
domain: Bacteria
phylum: Pseudomonadota
class: Gammaproteobacteria
order: Pseudomonadales
family: Pseudomonadaceae
genus: Pseudomonas
species: Pseudomonas helleri
full scientific name: Pseudomonas helleri von Neubeck et al. 2016

@ref: 24224

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas helleri

full scientific name: Pseudomonas helleri von Neubeck et al. 2016

strain designation: WS 4995

type strain: no

Morphology

multimedia

@ref: 24224
multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_29141.jpg
intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@ref: 24224
name: NUTRIENT AGAR (DSMZ Medium 1)
growth: yes
link: https://mediadive.dsmz.de/medium/1
composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

@ref: 24224
growth: positive
type: growth
temperature: 28
range: mesophilic

Isolation, sampling and environmental information

isolation

@ref: 24224
sample type: raw cow’s milk
geographic location: Southern Germany
country: Germany
origin.country: DEU
continent: Europe

isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Bovinae (Cow, Cattle)
#Host Body Product	#Fluids	#Milk

taxonmaps

@ref: 69479
File name: preview.99_442.png
url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_61;97_89;98_368;99_442&stattab=map
Last taxonomy: Pseudomonas
16S sequence: KP738716
Sequence Identity:
Total samples: 2942
soil counts: 460
aquatic counts: 830
animal counts: 1081
plant counts: 571

Safety information

risk assessment

@ref: 24224
biosafety level: 1
biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@ref: 24224
description: Pseudomonas helleri strain DSM 29141 16S ribosomal RNA gene, partial sequence
accession: KP738716
length: 1525
database: ena
NCBI tax ID: 1608996

External links

@ref: 24224

culture collection no.: DSM 29141, LMG 28434

straininfo link

@ref: 90774
straininfo: 396468

literature

topic: Phylogeny
Pubmed-ID: 26675012
title: Pseudomonas helleri sp. nov. and Pseudomonas weihenstephanensis sp. nov., isolated from raw cow's milk.
authors: von Neubeck M, Huptas C, Gluck C, Krewinkel M, Stoeckel M, Stressler T, Fischer L, Hinrichs J, Scherer S, Wenning M
journal: Int J Syst Evol Microbiol
DOI: 10.1099/ijsem.0.000852
year: 2015
mesh: Animals, Bacterial Typing Techniques, Base Composition, Cattle, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, Milk/*microbiology, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Pseudomonas/*classification/genetics/isolation & purification, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistry
topic2: Transcriptome

Reference

@id	authors	title	doi/url	catalogue
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ	10.1099/ijsem.0.004332
24224	Curators of the DSMZ		https://www.dsmz.de/collection/catalogue/details/culture/DSM-29141	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 29141)
69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.	MicrobeAtlas 1.0 beta	https://microbeatlas.org/
90774	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.	StrainInfo: A central database for resolving microbial strain identifiers	10.60712/SI-ID396468.1