Strain identifier

BacDive ID: 132377

Type strain: Yes

Species: Micromonospora ovatispora

Strain Designation: 270106, 270106SIM06

Strain history: CCTCC AA 2012009 <-- L. Li; Wuhan Univ., China; 2701SIM06.

NCBI tax ID(s): 1182603 (species)

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General

@ref: 24166

BacDive-ID: 132377

DSM-Number: 45759

keywords: 16S sequence, Bacteria, aerobe, spore-forming, Gram-positive

description: Micromonospora ovatispora 270106 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from mangrove soil.

NCBI tax id

  • NCBI tax id: 1182603
  • Matching level: species

strain history

@refhistory
24166<- L. Li, Wuhan Univ., China; 270106
67770CCTCC AA 2012009 <-- L. Li; Wuhan Univ., China; 2701SIM06.

doi: 10.13145/bacdive132377.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micromonosporales
  • family: Micromonosporaceae
  • genus: Micromonospora
  • species: Micromonospora ovatispora
  • full scientific name: Micromonospora ovatispora Li and Hong 2016

@ref: 24166

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Micromonosporaceae

genus: Micromonospora

species: Micromonospora ovatispora

full scientific name: Micromonospora ovatispora Li and Hong 2016

strain designation: 270106, 270106SIM06

type strain: yes

Morphology

cell morphology

  • @ref: 43802
  • gram stain: positive
  • motility: no

colony morphology

  • @ref: 43802
  • colony color: Vivid orange-yellow
  • medium used: ISP 2

multimedia

  • @ref: 24166
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_45759.jpg
  • caption: Medium 554 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

  • @ref: 43802
  • name: ISP 2
  • growth: yes

culture temp

@refgrowthtypetemperaturerange
43802positivegrowth20-37
67770positivegrowth28mesophilic

culture pH

  • @ref: 43802
  • ability: positive
  • type: growth
  • pH: 6-9
  • PH range: alkaliphile

Physiology and metabolism

oxygen tolerance

  • @ref: 43802
  • oxygen tolerance: aerobe

spore formation

  • @ref: 43802
  • spore description: Non-mptile spores (0.5-0.6 x 0.9-1 µm) were observed borne on the tips of the substrate mycelium
  • type of spore: spore
  • spore formation: yes

halophily

  • @ref: 43802
  • salt: NaCl
  • growth: positive
  • tested relation: growth
  • concentration: 0-3 %(w/v)

observation

  • @ref: 67770
  • observation: quinones: MK-10(H6), MK-10(H4)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
43802309162-oxoglutarate-carbon source
4380236219alpha-lactose-carbon source
4380228053melibiose-carbon source
4380216634raffinose-carbon source
4380230031succinate-carbon source
4380228017starch-hydrolysis
4380217632nitrate-reduction
4380217057cellobiose+carbon source
4380215824D-fructose+carbon source
4380212936D-galactose+carbon source
4380217634D-glucose+carbon source
4380216899D-mannitol+carbon source
4380216024D-mannose+carbon source
4380265327D-xylose+carbon source
4380262345L-rhamnose+carbon source
4380217306maltose+carbon source
4380217992sucrose+carbon source
4380285146carboxymethylcellulose+hydrolysis
43802casein+hydrolysis
438024853esculin+hydrolysis
438025291gelatin+hydrolysis
4380253424tween 20+hydrolysis
4380253423tween 40+hydrolysis
4380253425tween 60+hydrolysis
4380253426tween 80+hydrolysis
4380222599arabinose+/-carbon source
4380217924D-sorbitol+/-carbon source
4380217814salicin+/-carbon source

metabolite production

@refChebi-IDmetaboliteproduction
4380216136hydrogen sulfideno
4380289634melaninno

enzymes

  • @ref: 43802
  • value: catalase
  • activity: +
  • ec: 1.11.1.6

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
24166mangrove soilHainan province, SanyaChinaCHNAsia
43802Mangrove sediment soil collected in SanyaSanya, Hainan ProvinceChinaCHNAsia
67770Mangrove soilSanya, Hainan ProvinceChinaCHNAsia

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Mangrove
#Environmental#Terrestrial#Sediment
#Environmental#Terrestrial#Soil

Safety information

risk assessment

  • @ref: 24166
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 24166
  • description: Micromonospora ovatispora strain 2701SIM06 16S ribosomal RNA gene, partial sequence
  • accession: JQ836686
  • length: 1478
  • database: ena
  • NCBI tax ID: 1182603

GC content

  • @ref: 24166
  • GC-content: 70.4
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 24166

culture collection no.: DSM 45759, CCTCC AA 2012009, JCM 31747

straininfo link

  • @ref: 90721
  • straininfo: 398613

literature

  • topic: Phylogeny
  • Pubmed-ID: 26620702
  • title: Micromonospora ovatispora sp. nov. isolated from mangrove soil.
  • authors: Li L, Hong K
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.000808
  • year: 2015

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24166Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-45759Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45759)
43802Lei Li, Kui HongMicromonospora ovatispora sp. nov. isolated from mangrove soil10.1099/ijsem.0.000808IJSEM 66: 889-893 201626620702
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
90721Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID398613.1