Strain identifier

BacDive ID: 132290

Type strain: Yes

Species: Thalassotalea eurytherma

Strain Designation: Za6a-12

Strain history: C. Sun Za6a-12.

NCBI tax ID(s): 1144278 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 24079

BacDive-ID: 132290

DSM-Number: 27068

keywords: 16S sequence, Bacteria, mesophilic

description: Thalassotalea eurytherma Za6a-12 is a mesophilic bacterium that was isolated from seawater.

NCBI tax id

  • NCBI tax id: 1144278
  • Matching level: species

strain history

@refhistory
24079<- S. Cong, Zhejiang Univ., Hangzhou, China; Za6a-12
67770C. Sun Za6a-12.

doi: 10.13145/bacdive132290.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Alteromonadales
  • family: Colwelliaceae
  • genus: Thalassotalea
  • species: Thalassotalea eurytherma
  • full scientific name: Thalassotalea eurytherma (Sun et al. 2014) Hou et al. 2015
  • synonyms

    • @ref: 20215
    • synonym: Thalassomonas eurytherma

@ref: 24079

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Alteromonadales

family: Colwelliaceae

genus: Thalassotalea

species: Thalassotalea eurytherma

full scientific name: Thalassotalea eurytherma (Sun et al. 2014) Hou et al. 2015 emend. Wang et al. 2018

strain designation: Za6a-12

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 24079
  • name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/514
  • composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
24079positivegrowth28mesophilic
67770positivegrowth28mesophilic

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentlatitudelongitude
24079seawaterEast China Sea, Zhoushan Islands (122° 59' 37'' E 29° 25' 27'' N)ChinaCHNAsia29.4242122.994
67770Seawater from Zhoushan Islands in the East China Sea at a depth of 58 m

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic
  • Cat3: #Marine

taxonmaps

  • @ref: 69479
  • File name: preview.99_154344.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_82;96_15890;97_67917;98_101811;99_154344&stattab=map
  • Last taxonomy: Thalassotalea eurytherma subclade
  • 16S sequence: JQ288724
  • Sequence Identity:
  • Total samples: 327
  • soil counts: 2
  • aquatic counts: 214
  • animal counts: 111

Safety information

risk assessment

  • @ref: 24079
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 24079
  • description: Thalassotalea eurytherma strain Za6a-12 16S ribosomal RNA gene, partial sequence
  • accession: JQ288724
  • length: 1465
  • database: ena
  • NCBI tax ID: 1144278

GC content

  • @ref: 24079
  • GC-content: 42.7
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 24079

culture collection no.: DSM 27068, CGMCC 1.12115, JCM 18482, BCRC 80945

straininfo link

  • @ref: 90637
  • straininfo: 397501

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny24664580Thalassomonas eurytherma sp. nov., a marine proteobacterium.Sun C, Huo YY, Liu JJ, Pan J, Qi YZ, Zhang XQ, Zhang Y, Zheng G, Wu MInt J Syst Evol Microbiol10.1099/ijs.0.058255-02014Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Gammaproteobacteria/*classification/genetics/isolation & purification, Molecular Sequence Data, *Phylogeny, RNA, Ribosomal, 16S/analysis/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Ubiquinone/chemistryGenetics
Phylogeny26400666Thalassotalea marina sp. nov., isolated from a marine recirculating aquaculture system, reclassification of Thalassomonas eurytherma as Thalassotalea eurytherma comb. nov. and emended description of the genus Thalassotalea.Hou TT, Liu Y, Zhong ZP, Liu HC, Liu ZPInt J Syst Evol Microbiol10.1099/ijsem.0.0006372015*Aquaculture, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Gammaproteobacteria/*classification/genetics/isolation & purification, Molecular Sequence Data, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Ubiquinone/chemistryGenetics
Phylogeny29143725Thalassotalea atypica sp. nov., isolated from seawater, and emended description of Thalassotalea eurytherma.Wang Y, Liu T, Ming H, Sun P, Cao C, Guo M, Du J, Zhou C, Zhu WInt J Syst Evol Microbiol10.1099/ijsem.0.0024952017Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Gammaproteobacteria/*classification/genetics/isolation & purification, Phosphatidylethanolamines/chemistry, Phosphatidylglycerols/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Ubiquinone/chemistryTranscriptome

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24079Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-27068Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 27068)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
90637Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID397501.1