Strain identifier
BacDive ID: 132290
Type strain:
Species: Thalassotalea eurytherma
Strain Designation: Za6a-12
Strain history: C. Sun Za6a-12.
NCBI tax ID(s): 1144278 (species)
General
@ref: 24079
BacDive-ID: 132290
DSM-Number: 27068
keywords: 16S sequence, Bacteria, mesophilic
description: Thalassotalea eurytherma Za6a-12 is a mesophilic bacterium that was isolated from seawater.
NCBI tax id
- NCBI tax id: 1144278
- Matching level: species
strain history
@ref | history |
---|---|
24079 | <- S. Cong, Zhejiang Univ., Hangzhou, China; Za6a-12 |
67770 | C. Sun Za6a-12. |
doi: 10.13145/bacdive132290.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Alteromonadales
- family: Colwelliaceae
- genus: Thalassotalea
- species: Thalassotalea eurytherma
- full scientific name: Thalassotalea eurytherma (Sun et al. 2014) Hou et al. 2015
synonyms
- @ref: 20215
- synonym: Thalassomonas eurytherma
@ref: 24079
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Alteromonadales
family: Colwelliaceae
genus: Thalassotalea
species: Thalassotalea eurytherma
full scientific name: Thalassotalea eurytherma (Sun et al. 2014) Hou et al. 2015 emend. Wang et al. 2018
strain designation: Za6a-12
type strain: yes
Culture and growth conditions
culture medium
- @ref: 24079
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
24079 | positive | growth | 28 | mesophilic |
67770 | positive | growth | 28 | mesophilic |
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent | latitude | longitude |
---|---|---|---|---|---|---|---|
24079 | seawater | East China Sea, Zhoushan Islands (122° 59' 37'' E 29° 25' 27'' N) | China | CHN | Asia | 29.4242 | 122.994 |
67770 | Seawater from Zhoushan Islands in the East China Sea at a depth of 58 m |
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Marine
taxonmaps
- @ref: 69479
- File name: preview.99_154344.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_82;96_15890;97_67917;98_101811;99_154344&stattab=map
- Last taxonomy: Thalassotalea eurytherma subclade
- 16S sequence: JQ288724
- Sequence Identity:
- Total samples: 327
- soil counts: 2
- aquatic counts: 214
- animal counts: 111
Safety information
risk assessment
- @ref: 24079
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 24079
- description: Thalassotalea eurytherma strain Za6a-12 16S ribosomal RNA gene, partial sequence
- accession: JQ288724
- length: 1465
- database: ena
- NCBI tax ID: 1144278
GC content
- @ref: 24079
- GC-content: 42.7
- method: high performance liquid chromatography (HPLC)
External links
@ref: 24079
culture collection no.: DSM 27068, CGMCC 1.12115, JCM 18482, BCRC 80945
straininfo link
- @ref: 90637
- straininfo: 397501
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 24664580 | Thalassomonas eurytherma sp. nov., a marine proteobacterium. | Sun C, Huo YY, Liu JJ, Pan J, Qi YZ, Zhang XQ, Zhang Y, Zheng G, Wu M | Int J Syst Evol Microbiol | 10.1099/ijs.0.058255-0 | 2014 | Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Gammaproteobacteria/*classification/genetics/isolation & purification, Molecular Sequence Data, *Phylogeny, RNA, Ribosomal, 16S/analysis/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Ubiquinone/chemistry | Genetics |
Phylogeny | 26400666 | Thalassotalea marina sp. nov., isolated from a marine recirculating aquaculture system, reclassification of Thalassomonas eurytherma as Thalassotalea eurytherma comb. nov. and emended description of the genus Thalassotalea. | Hou TT, Liu Y, Zhong ZP, Liu HC, Liu ZP | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000637 | 2015 | *Aquaculture, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Gammaproteobacteria/*classification/genetics/isolation & purification, Molecular Sequence Data, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Ubiquinone/chemistry | Genetics |
Phylogeny | 29143725 | Thalassotalea atypica sp. nov., isolated from seawater, and emended description of Thalassotalea eurytherma. | Wang Y, Liu T, Ming H, Sun P, Cao C, Guo M, Du J, Zhou C, Zhu W | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002495 | 2017 | Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Gammaproteobacteria/*classification/genetics/isolation & purification, Phosphatidylethanolamines/chemistry, Phosphatidylglycerols/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Ubiquinone/chemistry | Transcriptome |
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
24079 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-27068 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 27068) | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
90637 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID397501.1 |