Strain identifier

BacDive ID: 132277

Type strain: Yes

Species: Streptomyces fabae

Strain Designation: T66

Strain history: <- NBRC; NBRC 110902 <- Kyonggi Univ. (J. Kim); T66

NCBI tax ID(s): 1550620 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 24066

BacDive-ID: 132277

DSM-Number: 102121

keywords: 16S sequence, Bacteria, mesophilic

description: Streptomyces fabae T66 is a mesophilic bacterium that was isolated from Soybean rhizosphere soil.

NCBI tax id

  • NCBI tax id: 1550620
  • Matching level: species

strain history

  • @ref: 24066
  • history: <- NBRC; NBRC 110902 <- Kyonggi Univ. (J. Kim); T66

doi: 10.13145/bacdive132277.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces fabae
  • full scientific name: Streptomyces fabae Nguyen and Kim 2015

@ref: 24066

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces fabae

full scientific name: Streptomyces fabae Nguyen and Kim 2015

strain designation: T66

type strain: yes

Morphology

multimedia

  • @ref: 24066
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_102121.jpg
  • caption: Medium 65 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

  • @ref: 24066
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/65
  • composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

  • @ref: 24066
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 24066
  • sample type: Soybean rhizosphere soil
  • geographic location: Gyonggi Siheung Sorae
  • country: Republic of Korea
  • origin.country: KOR
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Rhizosphere

Safety information

risk assessment

  • @ref: 24066
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 24066
  • description: Streptomyces fabae strain T66 16S ribosomal RNA gene, partial sequence
  • accession: KM229360
  • length: 1488
  • database: ena
  • NCBI tax ID: 1550620

GC content

  • @ref: 24066
  • GC-content: 71.67

External links

@ref: 24066

culture collection no.: DSM 102121, KACC 18226, KEMB 9005-219, NBRC 110902

straininfo link

  • @ref: 90624
  • straininfo: 397683

literature

  • topic: Phylogeny
  • Pubmed-ID: 26303567
  • title: Description of Streptomyces fabae sp. nov., a producer of antibiotics against microbial pathogens, isolated from soybean (Glycine max) rhizosphere soil.
  • authors: Nguyen TM, Kim J
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.000551
  • year: 2015
  • mesh: Anti-Bacterial Agents/*biosynthesis, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, *Rhizosphere, Sequence Analysis, DNA, *Soil Microbiology, Soybeans/*microbiology, Streptomyces/*classification/genetics/isolation & purification, Vitamin K 2/chemistry
  • topic2: Transcriptome

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24066Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-102121Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102121)
90624Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID397683.1