Strain identifier

BacDive ID: 13215

Type strain: Yes

Species: Amycolatopsis orientalis

Strain Designation: M 43-05865, Pittinger M43-05865, CCTMLa 2924

Strain history: CIP <- 2001, CCM, Amycolatopsis orientalis subsp. orientalis <- R. E. Gordon <- E. B. Shirling <- R. C. Pittenger: strain M 43-05865

NCBI tax ID(s): 1125971 (strain), 31958 (species)

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General

@ref: 9119

BacDive-ID: 13215

DSM-Number: 40040

keywords: genome sequence, 16S sequence, Bacteria, obligate aerobe, spore-forming, mesophilic, Gram-positive, rod-shaped, antibiotic compound production, human pathogen

description: Amycolatopsis orientalis M 43-05865 is an obligate aerobe, spore-forming, mesophilic human pathogen that builds an aerial mycelium and produces antibiotic compounds.

NCBI tax id

NCBI tax idMatching level
1125971strain
31958species

strain history

@refhistory
9119<- E.B. Shirling, ISP <- R.C. Pittenger, M 43-05865 (Streptomyces orientalis)
67770KCC S-0235 <-- Y. Okami (NIHJ 483) <-- ISP 5040 <-- R. C. Pittenger and R. B. Brigham M43-05865.
121436CIP <- 2001, CCM, Amycolatopsis orientalis subsp. orientalis <- R. E. Gordon <- E. B. Shirling <- R. C. Pittenger: strain M 43-05865

doi: 10.13145/bacdive13215.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Pseudonocardiales
  • family: Pseudonocardiaceae
  • genus: Amycolatopsis
  • species: Amycolatopsis orientalis
  • full scientific name: Amycolatopsis orientalis (Pittenger and Brigham 1956) Lechevalier et al. 1986

  • synonyms

    @refsynonym
    20215Streptomyces orientalis
    20215Nocardia orientalis

@ref: 9119

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Pseudonocardiaceae

genus: Amycolatopsis

species: Amycolatopsis orientalis

full scientific name: Amycolatopsis orientalis (Pittenger and Brigham 1956) Lechevalier et al. 1986 emend. Nouioui et al. 2018

strain designation: M 43-05865, Pittinger M43-05865, CCTMLa 2924

type strain: yes

Morphology

cell morphology

  • @ref: 121436
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: no

colony morphology

@refcolony colorincubation periodmedium used
19392Yellow10-14 daysISP 2
19392Beige10-14 daysISP 3
19392Beige10-14 daysISP 4
19392Beige10-14 daysISP 5
19392Beige10-14 daysISP 6
19392Beige10-14 daysISP 7
121436

multicellular morphology

@refforms multicellular complexcomplex namecomplex colormedium name
19392yesAerial MyceliumWhiteISP 2
19392yesAerial MyceliumWhiteISP 3
19392yesAerial MyceliumWhiteISP 4
19392yesAerial MyceliumWhiteISP 5
19392yesAerial MyceliumWhiteISP 6
19392yesAerial MyceliumWhiteISP 7

multimedia

  • @ref: 9119
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_40040.jpg
  • caption: Medium 65 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
19392ISP 2yesName: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
19392ISP 3yesName: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
19392ISP 4yesName: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
19392ISP 5yesName: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
19392ISP 6yesName: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
19392ISP 7yesName: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes
38186MEDIUM 57 - for Streptomyces, Nocardioides, Lentzea albidocapillata and Streptoverticillium reticulumyesDistilled water make up to (1000.000 ml);Agar (15.000 g);Glucose (4.000g);Yeast extract (4.000 g);Malt extract (10.000 g);Calcium carbonate (2.000 g)
9119TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yesName: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled waterhttps://mediadive.dsmz.de/medium/535
9119GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yesName: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled waterhttps://mediadive.dsmz.de/medium/65
121436CIP Medium 57yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=57

culture temp

@refgrowthtypetemperaturerange
19392positiveoptimum30mesophilic
9119positivegrowth28mesophilic
38186positivegrowth30mesophilic
67770positivegrowth28mesophilic
121436positivegrowth10-41
121436nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 121436
  • oxygen tolerance: obligate aerobe

spore formation

  • @ref: 19392
  • spore description: spore surface: smooth, Fragmentation: +
  • spore formation: yes

compound production

@refcompound
9119vancomycin
20216Vancomycin

halophily

@refsaltgrowthtested relationconcentration
19392NaClpositivemaximum5 %
121436NaClpositivegrowth0-2 %
121436NaClnogrowth4 %
121436NaClnogrowth6 %
121436NaClnogrowth8 %
121436NaClnogrowth10 %

observation

  • @ref: 67770
  • observation: quinones: MK-9(H4), MK-9(H2)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
1939262968cellulose-
1939216634raffinose-
1939226546rhamnose-
1939228757fructose-
1939229864mannitol+
1939217268myo-inositol+
1939218222xylose-
1939217992sucrose-
1939222599arabinose+
1939217234glucose+
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate-builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol-builds acid from
6837118287L-fucose-builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837162318D-lyxose-builds acid from
6837132528turanose-builds acid from
6837128066gentiobiose-builds acid from
6837117151xylitol-builds acid from
6837128087glycogen-builds acid from
6837128017starch-builds acid from
6837116634raffinose-builds acid from
683716731melezitose-builds acid from
6837115443inulin-builds acid from
6837127082trehalose-builds acid from
6837117992sucrose-builds acid from
6837128053melibiose-builds acid from
6837117716lactose-builds acid from
6837117306maltose-builds acid from
6837117057cellobiose-builds acid from
6837117814salicin-builds acid from
683714853esculin+builds acid from
6837118305arbutin-builds acid from
6837127613amygdalin-builds acid from
6837159640N-acetylglucosamine-builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837117924D-sorbitol-builds acid from
6837116899D-mannitol-builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose-builds acid from
6837117266L-sorbose-builds acid from
6837116024D-mannose-builds acid from
6837115824D-fructose-builds acid from
6837117634D-glucose-builds acid from
6837112936D-galactose-builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose-builds acid from
6837116988D-ribose-builds acid from
6837130849L-arabinose-builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from
6837117754glycerol-builds acid from
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate-assimilation
6836924265gluconate+assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin+hydrolysis
683694853esculin+hydrolysis
6836916199urea+hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction
683685291gelatin+hydrolysis
6836827897tryptophan-energy source
6836816199urea-hydrolysis
6836816947citrate+assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine+hydrolysis
12143616947citrate-carbon source
1214364853esculin+hydrolysis
121436606565hippurate+hydrolysis
12143617632nitrate+reduction
12143616301nitrite-reduction
12143617632nitrate-respiration

antibiotic resistance

  • @ref: 121436
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

@refChebi-IDmetaboliteproduction
6836935581indoleno
6777028001vancomycinyes
6836815688acetoinno
6836835581indoleno
6836816136hydrogen sulfideno
12143635581indoleno

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-test
6836935581indole-
6836815688acetoin-
6836835581indole-

enzymes

@refvalueactivityec
68369gelatinase+
68369beta-glucosidase+3.2.1.21
68369urease+3.5.1.5
68368gelatinase+
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase+3.5.3.6
68368beta-galactosidase-3.2.1.23
121436oxidase-
121436beta-galactosidase+3.2.1.23
121436alcohol dehydrogenase-1.1.1.1
121436gelatinase+
121436amylase+
121436DNase-
121436caseinase+3.4.21.50
121436catalase+1.11.1.6
121436tween esterase+
121436gamma-glutamyltransferase+2.3.2.2
121436lecithinase+
121436lipase-
121436lysine decarboxylase-4.1.1.18
121436ornithine decarboxylase-4.1.1.17
121436phenylalanine ammonia-lyase-4.3.1.24
121436urease+3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382cystine arylamidase-3.4.11.3
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- FucosidaseControl
19392+++-----+++-----+--
9119+++-+---+/-+/--+/-----+---
121436+++-++-++++++--++---

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGEL
19392-+--+-----+

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPAC
9119+--+/-++++++++++/-+-+++/-+

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
121436------------------------+------------------------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
121436+++-+----------++-++++-++-+----+++---+--+-------++-+--+----++-++++---+---+-+---++---+-+-+++++++-+++

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountry
9119soilAsia
67770SoilOrientAsia
121436Environment, SoilAsia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_3477.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_10;96_408;97_462;98_1734;99_3477&stattab=map
  • Last taxonomy: Amycolatopsis
  • 16S sequence: AJ400711
  • Sequence Identity:
  • Total samples: 319
  • soil counts: 213
  • aquatic counts: 14
  • animal counts: 67
  • plant counts: 25

Safety information

risk assessment

@refpathogenicity humanbiosafety levelbiosafety level comment
9119yes, in single cases1Risk group (German classification)
193921Risk group (German classification)
1214361Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Amycolatopsis orientalis partial 16S rRNA gene, strain IMSNU 20058TAJ4007111458ena31958
20218Amycolatopsis orientalis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4235D44036120ena31958
20218Amycolatopsis orientalis gene for 16S ribosomal RNA, partial sequenceD869351467ena31958
20218A.orientalis (ssp. orientalis DSM 40040) 16S ribosomal RNA (partial)X769581444ena31958

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Amycolatopsis orientalis DSM 40040 = KCTC 94121125971.3wgspatric1125971
66792Amycolatopsis orientalis DSM 400402554235102draftimg1125971
67770Amycolatopsis orientalis DSM 40040 = KCTC 9412 KCTC 9412TGCA_000478275contigncbi1125971

GC content

@refGC-contentmethod
6777066thermal denaturation, midpoint method (Tm)
6777069genome sequence analysis

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
motileno93.163no
flagellatedno97.005no
gram-positiveyes84.444no
anaerobicno99.328no
aerobicyes94.291no
halophileno91.299no
spore-formingyes92.312yes
thermophileno97.47yes
glucose-utilyes89.105no
glucose-fermentno93.845yes

External links

@ref: 9119

culture collection no.: DSM 40040, ATCC 19795, CBS 547.68, CCM 2778, IAM 14281, IFO 12360, IFO 12806, IMET 7510, IMET 7653, IMSNU 20058, ISP 5040, JCM 4235, JCM 4600, KCC S-0235, KCC S-0600, NBRC 12360, NBRC 12806, NIHJ 483, NRRL 2450, RIA 1074, BCRC 11615, CGMCC 4.1214, CIP 107113, HUT 6592, IFM 0528, KCCM 40595, KCTC 9412, NBIMCC 2297, NCIMB 12945, VKM Ac-866

straininfo link

  • @ref: 82423
  • straininfo: 34716

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Metabolism1838104Microbial de-mannosylation and mannosylation of teicoplanin derivatives.Borghi A, Ferrari P, Gallo GG, Zanol M, Zerilli LF, Lancini GCJ Antibiot (Tokyo)10.7164/antibiotics.44.14441991Actinomycetales/*metabolism, Anti-Bacterial Agents/*metabolism, Glycopeptides/metabolism, Mannose/*metabolism, Nocardia/*metabolism, Streptomyces/*metabolism, Teicoplanin
Enzymology2351651Purification and characterization of an exo-beta-D-glucosaminidase, a novel type of enzyme, from Nocardia orientalis.Nanjo F, Katsumi R, Sakai KJ Biol ChemS0021-9258(19)38783-61990Chitin/analogs & derivatives, Chitosan, Chromatography, Affinity, Chromatography, Gel, Chromatography, Ion Exchange, Electrophoresis, Polyacrylamide Gel, Glycosides/chemical synthesis, Hexosaminidases/*isolation & purification/metabolism, Hydrogen-Ion Concentration, Kinetics, Molecular Weight, Nocardia/*enzymology, Substrate SpecificityPhylogeny
Enzymology3814620Transglycosylation reaction of a chitinase purified from Nocardia orientalis.Usui T, Hayashi Y, Nanjo F, Sakai K, Ishido YBiochim Biophys Acta10.1016/0304-4165(87)90017-11987Chitinases/*isolation & purification/metabolism, Chromatography/methods, Glycosylation, Hydrogen-Ion Concentration, Hydrolysis, Nocardia/*enzymology, Oligosaccharides/metabolism, Substrate Specificity, TemperatureMetabolism
Biotechnology10099566Vancomycin production is enhanced in chemostat culture with biomass-recycle.McIntyre JJ, Bunch AW, Bull ATBiotechnol Bioeng10.1002/(sici)1097-0290(19990305)62:5<576::aid-bit9>3.0.co;2-p1999Actinomycetales/*metabolism, Bacillus subtilis, Biological Assay, Biomass, Bioreactors, Biotechnology, Filtration, Oscillometry, Vancomycin/analysis/*biosynthesisMetabolism
10978772The Vancomycin biosynthetic pathway is induced in oxygen-limited Amycolatopsis orientalis (ATCC 19795) cultures that do not produce antibiotic.Dunstan GH, Avignone-Rossa C, Langley D, Bushell MEEnzyme Microb Technol10.1016/s0141-0229(00)00238-62000
Phylogeny14742491Reclassification of Amycolatopsis orientalis subsp. lurida Lechevalier et al. 1986 as Amycolatopsis lurida sp. nov., comb. nov.Stackebrandt E, Kroppenstedt RM, Wink J, Schumann PInt J Syst Evol Microbiol10.1099/ijs.0.02937-02004Actinomycetales/*classification/genetics/isolation & purification/metabolism, Classification, Enzymes/metabolism, PhylogenyEnzymology
Phylogeny16403887Reclassification of Amycolatopsis orientalis DSM 43387 as Amycolatopsis benzoatilytica sp. nov.Majumdar S, Prabhagaran SR, Shivaji S, Lal RInt J Syst Evol Microbiol10.1099/ijs.0.63766-02006Actinomycetales/chemistry/*classification/isolation & purification/physiology, Caseins/metabolism, Fatty Acids, Gelatin/metabolism, Humans, Hydrolysis, Hypoxanthine/metabolism, Lactose/metabolism, Lipids, Molecular Sequence Data, Mycetoma/*microbiology, Neck, Polysorbates/metabolism, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sequence Homology, Nucleic Acid, Species Specificity, Xanthine/metabolismMetabolism
Genetics18506900Nucleotide sequence of plasmid pA387 of Amycolatopsis benzoatilytica and construction of a conjugative shuttle vector.Malhotra S, Majumdar S, Kumar M, Bhasin VK, Gartemann KH, Lal RJ Basic Microbiol10.1002/jobm.2007003262008Actinomycetales/*genetics, Base Sequence, *Conjugation, Genetic, *DNA Replication, DNA, Bacterial/*isolation & purification, Electroporation, Escherichia coli/genetics, *Genetic Vectors, Molecular Sequence Data, Nucleic Acid Hybridization, Open Reading Frames, Physical Chromosome Mapping, Plasmids, Sequence Analysis, DNAPhylogeny
Biotechnology18623596Vancomycin production in batch and continuous culture.McIntyre JJ, Bull AT, Bunch AWBiotechnol Bioeng10.1002/(SICI)1097-0290(19960220)49:4<412::AID-BIT8>3.0.CO;2-S1996
Genetics23814036Genome Sequence of the Vancomycin-Producing Amycolatopsis orientalis subsp. orientalis Strain KCTC 9412T.Jeong H, Sim YM, Kim HJ, Lee DW, Lim SK, Lee SJGenome Announc10.1128/genomeA.00408-132013
Metabolism27671711Degradation of carbonyl sulfide by Actinomycetes and detection of clade D of beta-class carbonic anhydrase.Ogawa T, Kato H, Higashide M, Nishimiya M, Katayama YFEMS Microbiol Lett10.1093/femsle/fnw2232016

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9119Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40040)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40040
19392Wink, J.http://www.dsmz.de/microorganisms/wink_pdf/DSM40040.pdfCompendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20216Curators of the HKIhttp://www.leibniz-hki.de/de/Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI)
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
38186Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/4513
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68368Automatically annotated from API 20E
68369Automatically annotated from API 20NE
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
82423Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID34716.1StrainInfo: A central database for resolving microbial strain identifiers
121436Curators of the CIPCollection of Institut Pasteur (CIP 107113)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20107113