Archive BacDiveID:10.13145/bacdive132050.20230509.8.1

Strain identifier

BacDive ID: 132050

Type strain:

Species: Clostridium cellulosi

Strain Designation: DG5

Strain history: <- D. Köck, TU Munich, Freising-Weihenstephan, Germany; DG5 <- D. Köck {2013}

NCBI tax ID(s): 29343 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 23841

BacDive-ID: 132050

DSM-Number: 29189

keywords: genome sequence, Bacteria, thermophilic

description: Clostridium cellulosi DG5 is a thermophilic bacterium that was isolated from thermophile biogas plant.

NCBI tax id

NCBI tax id: 29343
Matching level: species

strain history

@ref: 23841
history: <- D. Köck, TU Munich, Freising-Weihenstephan, Germany; DG5 <- D. Köck {2013}

doi: 10.13145/bacdive132050.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/bacillota
domain: Bacteria
phylum: Bacillota
class: Clostridia
order: Eubacteriales
family: Clostridiaceae
genus: Clostridium
species: Clostridium cellulosi
full scientific name: Clostridium cellulosi He et al. 1991

@ref: 23841

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Anaeroplasmatales

family: Clostridiaceae

genus: Clostridium

species: Clostridium cellulosi

full scientific name: Clostridium cellulosi He et al. 1991

strain designation: DG5

type strain: no

Culture and growth conditions

culture medium

@ref: 23841
name: CLOSTRIDIUM (GS) MEDIUM (DSMZ Medium 255)
growth: yes
link: https://mediadive.dsmz.de/medium/255
composition: Name: CLOSTRIDIUM (GS) MEDIUM (DSMZ Medium 255) Composition: Morpholinopropane sulfonic acid 9.98004 g/l Yeast extract 5.98802 g/l Cellobiose 4.99002 g/l Urea 1.99601 g/l L-Cysteine HCl x H2O 0.998004 g/l K2HPO4 x 3 H2O 0.998004 g/l KH2PO4 0.499002 g/l MgCl2 x 6 H2O 0.499002 g/l CaCl2 x 2 H2O 0.0499002 g/l FeSO4 x 7 H2O 0.0012475 g/l Sodium resazurin 0.000499002 g/l Distilled water

culture temp

@ref: 23841
growth: positive
type: growth
temperature: 55
range: thermophilic

Isolation, sampling and environmental information

isolation

@ref: 23841
sample type: thermophile biogas plant
geographic location: Viersen
country: Germany
origin.country: DEU
continent: Europe
latitude: 51.2268
longitude: 6.3266

isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Industrial	#Plant (Factory)
#Condition	#Thermophilic (>45°C)

Safety information

risk assessment

@ref: 23841
biosafety level: 1
biosafety level comment: Risk group (German classification)

Sequence information

Genome sequences

@ref: 66792
description: Clostridium cellulosi DG5
accession: 2639762740
assembly level: complete
database: img
NCBI tax ID: 29343

GC content

@ref: 23841
GC-content: 44.15

External links

@ref: 23841

culture collection no.: DSM 29189

straininfo link

@ref: 90411
straininfo: 398002

Reference

@id	authors	title	doi/url	catalogue	journal	pubmed
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ	10.1099/ijsem.0.004332
23841	Curators of the DSMZ		https://www.dsmz.de/collection/catalogue/details/culture/DSM-29189	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 29189)
66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann	Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)	https://diaspora-project.de/progress.html#genomes
66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg	BRENDA, the ELIXIR core data resource in 2021: new developments and updates	10.1093/nar/gkaa1025		Nucleic Acids Res. 49: D498-D508 2020	33211880
90411	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.	StrainInfo: A central database for resolving microbial strain identifiers	10.60712/SI-ID398002.1