Strain identifier
BacDive ID: 132044
Type strain: 
Species: Anaeromassilibacillus senegalensis
Strain Designation: MT9
Strain history: <- F. Cadoret, Timone Hospital, Marseille, France; MT9 <- Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes {2015}
NCBI tax ID(s): 1673717 (species)
version 8.1 (current version)
General
@ref: 23835
BacDive-ID: 132044
DSM-Number: 102954
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Anaeromassilibacillus senegalensis MT9 is a mesophilic bacterium that was isolated from stool of a 1-year-old Senegalese kwashiorkor patient.
NCBI tax id
- NCBI tax id: 1673717
- Matching level: species
strain history
- @ref: 23835
- history: <- F. Cadoret, Timone Hospital, Marseille, France; MT9 <- Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes {2015}
doi: 10.13145/bacdive132044.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Clostridiaceae
- genus: Anaeromassilibacillus
- species: Anaeromassilibacillus senegalensis
- full scientific name: Anaeromassilibacillus senegalensis Guilhot et al. 2016
@ref: 23835
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Clostridiaceae
genus: Anaeromassilibacillus
species: Anaeromassilibacillus senegalensis
full scientific name: Anaeromassilibacillus senegalensis Guilhot et al. 2016
strain designation: MT9
type strain: no
Culture and growth conditions
culture medium
- @ref: 23835
- name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)
- growth: yes
- link: https://mediadive.dsmz.de/medium/110
- composition: Name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l K2HPO4 5.0 g/l Yeast extract 5.0 g/l D-Glucose 4.0 g/l Starch 1.0 g/l Maltose 1.0 g/l Cellobiose 1.0 g/l L-Cysteine HCl 0.5 g/l Ethanol 0.19 g/l Vitamin K3 0.05 g/l Hemin 0.005 g/l Sodium resazurin 0.0005 g/l Vitamin K1 NaOH Distilled water
culture temp
- @ref: 23835
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 23835
- sample type: stool of a 1-year-old Senegalese kwashiorkor patient
- country: Senegal
- origin.country: SEN
- continent: Africa
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Infection | #Patient | |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
| #Host | #Human | #Child |
taxonmaps
- @ref: 69479
- File name: preview.99_1848.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_229;96_854;97_998;98_1463;99_1848&stattab=map
- Last taxonomy: Anaeromassilibacillus senegalensis subclade
- 16S sequence: LN866991
- Sequence Identity:
- Total samples: 20456
- soil counts: 241
- aquatic counts: 317
- animal counts: 19856
- plant counts: 42
Sequence information
16S sequences
- @ref: 23835
- description: Anaeromassilibacillus senegalensis partial 16S rRNA gene, type strain mt9T
- accession: LN866991
- length: 1478
- database: ena
- NCBI tax ID: 1673717
Genome sequences
- @ref: 66792
- description: Anaeromassilibacillus senegalensis mt9
- accession: GCA_001261775
- assembly level: scaffold
- database: ncbi
- NCBI tax ID: 1673717
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | no | 90.596 | no |
| flagellated | no | 95.917 | no |
| gram-positive | yes | 92.145 | no |
| anaerobic | yes | 99.053 | no |
| aerobic | no | 98.001 | no |
| halophile | no | 88.875 | no |
| spore-forming | no | 65.094 | no |
| thermophile | no | 98.731 | yes |
| glucose-util | yes | 84.975 | no |
| glucose-ferment | yes | 65.485 | no |
External links
@ref: 23835
culture collection no.: DSM 102954, CSUR P1511
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | topic2 |
|---|---|---|---|---|---|---|---|
| Phylogeny | 27330815 | Anaeromassilibacillus senegalensis gen. nov., sp. nov., isolated from the gut of a child with kwashiorkor. | Guilhot E, Tidjani Alou M, Diallo A, Raoult D, Khelaifia S | New Microbes New Infect | 10.1016/j.nmni.2016.04.007 | 2016 | |
| Phylogeny | 28289546 | Genome sequence and description of Anaeromassilibacillus senegalensis gen. nov., sp. nov., isolated from the gut of patient with kwashiorkor. | Guilhot E, Alou MT, Lagier JC, Labas N, Couderc C, Delerce J, Diallo A, Sokhna C, Fournier PE, Raoult D, Khelaifia S | New Microbes New Infect | 10.1016/j.nmni.2017.01.009 | 2017 | Genetics |
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 23835 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-102954 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102954) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |