General

@ref: 23826

BacDive-ID: 132035

DSM-Number: 102883

keywords: 16S sequence, mesophilic

description: unclassified bacterium DSM 102883 is a mesophilic bacterium that was isolated from Stool sample from patient of Timone Hospital.

NCBI tax id

• NCBI tax id: 1869227
• Matching level: species

strain history

• @ref: 23826
• history: <- F. Cadoret, Timone Hospital, Marseille, France; Marseille-2434 <- Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes

doi: 10.13145/bacdive132035.20230509.8.1

Name and taxonomic classification

@ref: 23826

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Clostridiaceae

genus: unclassified

species: unclassified bacterium

full scientific name: unclassified bacterium

type strain: no

Culture and growth conditions

culture medium

• @ref: 23826
• name: CMC MEDIUM (N2/CO2) (DSMZ Medium 110a)
• growth: yes
• link: https://mediadive.dsmz.de/medium/110a
• composition: Name: CMC MEDIUM (N2/CO2) (DSMZ Medium 110a) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Yeast extract 5.0 g/l K2HPO4 5.0 g/l D-Glucose 4.0 g/l Na2CO3 1.5 g/l Cellobiose 1.0 g/l Maltose 1.0 g/l Starch 1.0 g/l L-Cysteine HCl x H2O 0.5 g/l Sodium resazurin 0.0005 g/l NaOH Distilled water

culture temp

• @ref: 23826
• growth: positive
• type: growth
• temperature: 37
• range: mesophilic

Isolation, sampling and environmental information

isolation

• @ref: 23826
• sample type: Stool sample from patient of Timone Hospital
• geographic location: Marseille
• country: France
• origin.country: FRA
• continent: Europe

isolation source categories

taxonmaps

• @ref: 69479
• File name: preview.99_4424.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_34;96_2215;97_2681;98_3326;99_4424&stattab=map
• Last taxonomy: Clostridium mediterraneense subclade
• 16S sequence: LT161897
• Sequence Identity:
• Total samples: 14342
• soil counts: 577
• aquatic counts: 3471
• animal counts: 10135
• plant counts: 159

Sequence information

16S sequences

• @ref: 23826
• description: Clostridium sp. Marseille-P2434T partial 16S rRNA gene, type strain Marseille-P2434T
• accession: LT161897
• length: 1477
• database: ena
• NCBI tax ID: 1805472

External links

@ref: 23826

culture collection no.: DSM 102883, CSUR P2434, Marseille-2434

literature

• Pubmed-ID: 29021903
• title: 'Clostridium mediterraneense,' a new bacterial species isolated from the human gut.
• authors: Ndongo S, Cassir N, Delerce J, Raoult D, La Scola B
• journal: New Microbes New Infect
• DOI: 10.1016/j.nmni.2017.09.001
• year: 2017

Reference