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Strain identifier

BacDive ID: 131641

Type strain: No

Species: Bacillus sp.

Strain Designation: Root11

Strain history: <- P. Schulze-Lefert, Max Planck Institute for Plant Breeding Research, Cologne, Germany; Root11 <- Y. Bai

NCBI tax ID(s): 1409 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 23437

BacDive-ID: 131641

DSM-Number: 102372

keywords: genome sequence, Bacteria, mesophilic

description: Bacillus sp. Root11 is a mesophilic bacterium that was isolated from Roots of Arabidopsis thaliana .

NCBI tax id

  • NCBI tax id: 1409
  • Matching level: species

strain history: <- P. Schulze-Lefert, Max Planck Institute for Plant Breeding Research, Cologne, Germany; Root11 <- Y. Bai

doi: 10.13145/bacdive131641.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Bacillus
  • species: Bacillus sp.
  • full scientific name: Bacillus Cohn 1872 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Quasibacillus
    20215Pseudobacillus
    20215Maribacillus

@ref: 23437

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Bacillus

species: Bacillus sp.

full scientific name: Bacillus sp.

strain designation: Root11

type strain: no

Culture and growth conditions

culture medium

  • @ref: 23437
  • name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/220
  • composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

culture temp

  • @ref: 23437
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 23437
  • sample type: Roots of Arabidopsis thaliana (ecotype Columbia)
  • host species: Arabidopsis thaliana
  • geographic location: Cologne (50.958N 6.856E)
  • country: Germany
  • origin.country: DEU
  • continent: Europe
  • latitude: 50.958
  • longitude: 6.856

isolation source categories

Cat1Cat2Cat3
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Root (Rhizome)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Bacillus sp. Root11 Root11GCA_001429465scaffoldncbi1736425
66792Bacillus sp. Root111736425.3wgspatric1736425
66792Bacillus sp. Root112643221729draftimg1736425

External links

@ref: 23437

culture collection no.: DSM 102372

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
23437Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-102372Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102372)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes