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Strain identifier

BacDive ID: 131638

Type strain: No

Species: Bacillus testis

Strain history: <- S. Khelaifia, Unité de Recherche pour les Maladies Tropicales Emergentes, Fédération de Bactériologie Viorologie Hygiène Hospitalière; SIT10

NCBI tax ID(s): 1409 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 23434

BacDive-ID: 131638

DSM-Number: 101190

keywords: 16S sequence, Bacteria, mesophilic

description: Bacillus testis DSM 101190 is a mesophilic bacterium that was isolated from human faeces, 2-year old boy.

NCBI tax id

  • NCBI tax id: 1409
  • Matching level: species

strain history: <- S. Khelaifia, Unité de Recherche pour les Maladies Tropicales Emergentes, Fédération de Bactériologie Viorologie Hygiène Hospitalière; SIT10

doi: 10.13145/bacdive131638.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Bacillus
  • species: Bacillus testis
  • full scientific name: Bacillus testis Cimmino et al. 2016

@ref: 23434

domain: Bacteria

phylum: Firmicutes

class: Bacilli

family: Bacillaceae

genus: Bacillus

species: Bacillus testis

full scientific name: Bacillus testis Cimmino et al. 2016

type strain: no

Morphology

cell morphology

@refmotilityconfidencegram stain
69480yes65.599
6948091.351positive

Culture and growth conditions

culture medium

  • @ref: 23434
  • name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/220
  • composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

culture temp

  • @ref: 23434
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

spore formation

  • @ref: 69480
  • spore formation: yes
  • confidence: 96.118

halophily

  • @ref: 69480
  • halophily level: halophilic
  • confidence: 89.849

Isolation, sampling and environmental information

isolation

  • @ref: 23434
  • sample type: human faeces, 2-year old boy
  • country: Senegal
  • origin.country: SEN
  • continent: Africa

isolation source categories

Cat1Cat2Cat3
#Host#Human#Child
#Host Body Product#Gastrointestinal tract#Feces (Stool)

taxonmaps

  • @ref: 69479
  • File name: preview.99_2327.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_1256;97_1490;98_1815;99_2327&stattab=map
  • Last taxonomy: Bacillus testis subclade
  • 16S sequence: LN827531
  • Sequence Identity:
  • Total samples: 744
  • soil counts: 207
  • aquatic counts: 74
  • animal counts: 430
  • plant counts: 33

Sequence information

16S sequences

  • @ref: 23434
  • description: Bacillus sp. SIT10 partial 16S rRNA gene, strain SIT10
  • accession: LN827531
  • length: 1513
  • database: ena
  • NCBI tax ID: 1622072

External links

@ref: 23434

culture collection no.: DSM 101190, CSUR P1492, SIT 10

literature

  • topic: Genetics
  • Pubmed-ID: 27222713
  • title: Noncontiguous finished genome sequence and description of Bacillus testis strain SIT10 sp. nov.
  • authors: Cimmino T, Traore SI, Valentini C, le Page S, Sokhna C, Diallo A, Raoult D, Rolain JM
  • journal: New Microbes New Infect
  • DOI: 10.1016/j.nmni.2016.03.007
  • year: 2016
  • topic2: Phylogeny

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
23434Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-101190Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 101190)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes