Strain identifier
BacDive ID: 131637
Type strain:
Species: Bacillus sp.
Strain Designation: ID 08-848, LD003
Strain history: <- L. Bandounas, Delft Univ. Technol., Netherlands; LD003
NCBI tax ID(s): 1409 (species)
version 8.1 (current version)
General
@ref: 23433
BacDive-ID: 131637
DSM-Number: 24559
keywords: 16S sequence, Bacteria, mesophilic
description: Bacillus sp. ID 08-848 is a mesophilic bacterium that was isolated from soil beneath rotting wood.
NCBI tax id
- NCBI tax id: 1409
- Matching level: species
strain history
- @ref: 23433
- history: <- L. Bandounas, Delft Univ. Technol., Netherlands; LD003
doi: 10.13145/bacdive131637.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Bacillus
- species: Bacillus sp.
- full scientific name: Bacillus Cohn 1872 (Approved Lists 1980)
synonyms
@ref synonym 20215 Quasibacillus 20215 Pseudobacillus 20215 Maribacillus
@ref: 23433
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Bacillus
species: Bacillus sp.
full scientific name: Bacillus sp.
strain designation: ID 08-848, LD003
type strain: no
Culture and growth conditions
culture medium
- @ref: 23433
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
- @ref: 23433
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 23433
- sample type: soil beneath rotting wood
- geographic location: near Austerlitz, forest
- country: Netherlands
- origin.country: NLD
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Terrestrial | #Soil |
#Host | #Plants | #Decomposing plant |
#Host Body Product | #Plant | #Timber |
Sequence information
16S sequences
- @ref: 23433
- description: Bacillus sp. LD003 16S ribosomal RNA gene, partial sequence
- accession: HQ713575
- length: 987
- database: ena
- NCBI tax ID: 990366
External links
@ref: 23433
culture collection no.: DSM 24559
straininfo link
- @ref: 90043
- straininfo: 398515
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Enzymology | 21995752 | Isolation and characterization of novel bacterial strains exhibiting ligninolytic potential. | Bandounas L, Wierckx NJ, de Winde JH, Ruijssenaars HJ | BMC Biotechnol | 10.1186/1472-6750-11-94 | 2011 | Bacillus/*enzymology/genetics/isolation & purification, Bacterial Typing Techniques, Biodegradation, Environmental, Biomass, Burkholderiaceae/*enzymology/genetics/isolation & purification, Color, Coloring Agents/metabolism, Lignin/*metabolism, Molecular Weight, Phenothiazines/metabolism, Pseudomonas/*enzymology/genetics/isolation & purification, RNA, Ribosomal, 16S/genetics/metabolism, Sequence Analysis, DNA, *Soil Microbiology | Phylogeny |
Metabolism | 22564782 | Identification of a quinone dehydrogenase from a Bacillus sp. involved in the decolourization of the lignin-model dye, Azure B. | Bandounas L, Pinkse M, de Winde JH, Ruijssenaars HJ | N Biotechnol | 10.1016/j.nbt.2012.04.003 | 2012 | Absorption, Azure Stains/chemistry/*metabolism, Bacillus/*enzymology, Biodegradation, Environmental, Color, Coloring Agents/chemistry/*metabolism, Electrophoresis, Polyacrylamide Gel, Lignin/*metabolism, Mass Spectrometry, Methylene Blue/chemistry/metabolism, Oxidoreductases/*metabolism, Oxygen/metabolism, Quinones/*metabolism, Spores, Bacterial/metabolism, Tolonium Chloride/chemistry/metabolism | Enzymology |
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
23433 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-24559 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 24559) | |
90043 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID398515.1 |