Strain identifier

BacDive ID: 131637

Type strain: No

Species: Bacillus sp.

Strain Designation: ID 08-848, LD003

Strain history: <- L. Bandounas, Delft Univ. Technol., Netherlands; LD003

NCBI tax ID(s): 1409 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 23433

BacDive-ID: 131637

DSM-Number: 24559

keywords: 16S sequence, Bacteria, mesophilic

description: Bacillus sp. ID 08-848 is a mesophilic bacterium that was isolated from soil beneath rotting wood.

NCBI tax id

  • NCBI tax id: 1409
  • Matching level: species

strain history

  • @ref: 23433
  • history: <- L. Bandounas, Delft Univ. Technol., Netherlands; LD003

doi: 10.13145/bacdive131637.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Bacillus
  • species: Bacillus sp.
  • full scientific name: Bacillus Cohn 1872 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Quasibacillus
    20215Pseudobacillus
    20215Maribacillus

@ref: 23433

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Bacillus

species: Bacillus sp.

full scientific name: Bacillus sp.

strain designation: ID 08-848, LD003

type strain: no

Culture and growth conditions

culture medium

  • @ref: 23433
  • name: NUTRIENT AGAR (DSMZ Medium 1)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1
  • composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

  • @ref: 23433
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 23433
  • sample type: soil beneath rotting wood
  • geographic location: near Austerlitz, forest
  • country: Netherlands
  • origin.country: NLD
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Host#Plants#Decomposing plant
#Host Body Product#Plant#Timber

Sequence information

16S sequences

  • @ref: 23433
  • description: Bacillus sp. LD003 16S ribosomal RNA gene, partial sequence
  • accession: HQ713575
  • length: 987
  • database: ena
  • NCBI tax ID: 990366

External links

@ref: 23433

culture collection no.: DSM 24559

straininfo link

  • @ref: 90043
  • straininfo: 398515

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Enzymology21995752Isolation and characterization of novel bacterial strains exhibiting ligninolytic potential.Bandounas L, Wierckx NJ, de Winde JH, Ruijssenaars HJBMC Biotechnol10.1186/1472-6750-11-942011Bacillus/*enzymology/genetics/isolation & purification, Bacterial Typing Techniques, Biodegradation, Environmental, Biomass, Burkholderiaceae/*enzymology/genetics/isolation & purification, Color, Coloring Agents/metabolism, Lignin/*metabolism, Molecular Weight, Phenothiazines/metabolism, Pseudomonas/*enzymology/genetics/isolation & purification, RNA, Ribosomal, 16S/genetics/metabolism, Sequence Analysis, DNA, *Soil MicrobiologyPhylogeny
Metabolism22564782Identification of a quinone dehydrogenase from a Bacillus sp. involved in the decolourization of the lignin-model dye, Azure B.Bandounas L, Pinkse M, de Winde JH, Ruijssenaars HJN Biotechnol10.1016/j.nbt.2012.04.0032012Absorption, Azure Stains/chemistry/*metabolism, Bacillus/*enzymology, Biodegradation, Environmental, Color, Coloring Agents/chemistry/*metabolism, Electrophoresis, Polyacrylamide Gel, Lignin/*metabolism, Mass Spectrometry, Methylene Blue/chemistry/metabolism, Oxidoreductases/*metabolism, Oxygen/metabolism, Quinones/*metabolism, Spores, Bacterial/metabolism, Tolonium Chloride/chemistry/metabolismEnzymology

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
23433Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-24559Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 24559)
90043Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID398515.1