Strain identifier

BacDive ID: 131577

Type strain: No

Species: Tsukamurella hongkongensis

Strain Designation: HKU53

Strain history: J. L. L. Teng; Dept. of Microbiol., Univ. of Hong Kong, China; HKU53.

NCBI tax ID(s): 1671023 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 22804

BacDive-ID: 131577

DSM-Number: 100209

keywords: human pathogen, mesophilic, Bacteria, 16S sequence

description: Tsukamurella hongkongensis HKU53 is a mesophilic human pathogen that was isolated from human clinical sample, blood culture of a patient with catheter-related bacteraemia.

NCBI tax id

  • NCBI tax id: 1671023
  • Matching level: species

strain history

doi: 10.13145/bacdive131577.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Tsukamurellaceae
  • genus: Tsukamurella
  • species: Tsukamurella hongkongensis
  • full scientific name: Tsukamurella hongkongensis Teng et al. 2016

@ref: 22804

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Tsukamurellaceae

genus: Tsukamurella

species: Tsukamurella hongkongensis

full scientific name: Tsukamurella hongkongensis Teng et al. 2016

strain designation: HKU53

type strain: no

Morphology

multimedia

  • @ref: 22804
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_100209.jpg
  • caption: Medium 535a 37°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

  • @ref: 22804
  • name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)
  • growth: yes
  • link: https://bacmedia.dsmz.de/medium/535
  • composition: Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
22804positivegrowth37mesophilic
67770positivegrowth37mesophilic

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
22804human clinical sample, blood culture of a patient with catheter-related bacteraemiaQueen Mary HospitalHong KongHKGAsia
67770Blood culture of a patient with catheter-related bacteraemiaHong KongChinaCHNAsia

isolation source categories

Cat1Cat2Cat3
#Infection#Disease
#Infection#Medical device#Catheter
#Infection#Patient#Blood culture
#Host#Human

Safety information

risk assessment

  • @ref: 22804
  • pathogenicity human: yes, in single cases
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 22804
  • description: Tsukamurella hongkongensis strain HKU53 16S ribosomal RNA gene, partial sequence
  • accession: KP888573
  • length: 1405
  • database: ena
  • NCBI tax ID: 1671023

GC content

@refGC-contentmethod
2280471.2thermal denaturation, midpoint method (Tm)
6777068.9-73.5thermal denaturation, midpoint method (Tm)

External links

@ref: 22804

culture collection no.: DSM 100209, JCM 30716

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
22804Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-100209Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 100209)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/