Strain identifier
BacDive ID: 131308
Type strain: 
Species: Arthrobacter nanjingensis
Strain Designation: A33
Strain history: <- Z. Huang, Nanjing Agric. Univ., China; A33
NCBI tax ID(s): 1387716 (species)
General
@ref: 22535
BacDive-ID: 131308
DSM-Number: 28237
keywords: 16S sequence, Bacteria, mesophilic
description: Arthrobacter nanjingensis A33 is a mesophilic bacterium that was isolated from forest soil.
NCBI tax id
- NCBI tax id: 1387716
- Matching level: species
strain history
- @ref: 22535
- history: <- Z. Huang, Nanjing Agric. Univ., China; A33
doi: 10.13145/bacdive131308.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Micrococcaceae
- genus: Arthrobacter
- species: Arthrobacter nanjingensis
- full scientific name: Arthrobacter nanjingensis Huang et al. 2015
@ref: 22535
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Micrococcaceae
genus: Arthrobacter
species: Arthrobacter nanjingensis
full scientific name: Arthrobacter nanjingensis Huang et al. 2015
strain designation: A33
type strain: yes
Culture and growth conditions
culture medium
- @ref: 22535
- name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
- growth: yes
- link: https://mediadive.dsmz.de/medium/92
- composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
culture temp
- @ref: 22535
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 22535
- sample type: forest soil
- geographic location: Jiangsu Province, Nanjing
- country: China
- origin.country: CHN
- continent: Asia
- latitude: 32.5833
- longitude: 119.383
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Forest |
| #Environmental | #Terrestrial | #Soil |
Safety information
risk assessment
- @ref: 22535
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 22535
- description: Arthrobacter nanjingensis 16S ribosomal RNA gene, partial sequence
- accession: KF479547
- length: 1489
- database: ena
- NCBI tax ID: 1387716
GC content
- @ref: 22535
- GC-content: 66.8
- method: high performance liquid chromatography (HPLC)
External links
@ref: 22535
culture collection no.: DSM 28237, CCTCC AB 2014069
straininfo link
- @ref: 89750
- straininfo: 402158
literature
- topic: Phylogeny
- Pubmed-ID: 25358511
- title: Arthrobacter nanjingensis sp. nov., a mineral-weathering bacterium isolated from forest soil.
- authors: Huang Z, Bao YY, Yuan TT, Wang GX, He LY, Sheng XF
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.069492-0
- year: 2014
- mesh: Arthrobacter/*classification/genetics/isolation & purification, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, *Forests, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/chemistry
- topic2: Genetics
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 22535 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-28237 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28237) | |
| 89750 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID402158.1 |