Strain identifier
BacDive ID: 131178
Type strain: 
Species: Anaerobacillus alkalilacustris
Strain Designation: Z-0521
Strain history: <- D. G. Zavarzina, Winogradsky Inst. Microbiol., RAS, Moscow, Russia; Z-0521 <- D. G. Zavarzina {2005}
NCBI tax ID(s): 393763 (species)
version 8.1 (current version)
General
@ref: 22470
BacDive-ID: 131178
DSM-Number: 18345
keywords: genome sequence, 16S sequence, Bacteria, anaerobe, spore-forming, mesophilic, motile
description: Anaerobacillus alkalilacustris Z-0521 is an anaerobe, spore-forming, mesophilic bacterium that was isolated from deposits of a low-salt soda lake.
NCBI tax id
- NCBI tax id: 393763
- Matching level: species
strain history
- @ref: 22470
- history: <- D. G. Zavarzina, Winogradsky Inst. Microbiol., RAS, Moscow, Russia; Z-0521 <- D. G. Zavarzina {2005}
doi: 10.13145/bacdive131178.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Anaerobacillus
- species: Anaerobacillus alkalilacustris
- full scientific name: Anaerobacillus alkalilacustris corrig. Zavarzina et al. 2010
synonyms
- @ref: 20215
- synonym: Anaerobacillus alkalilacustre
@ref: 22470
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Anaerobacillus
species: Anaerobacillus alkalilacustris
full scientific name: Anaerobacillus alkalilacustris Zavarzina et al. 2010
strain designation: Z-0521
type strain: yes
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | yes | 98.036 | |
| 69480 | 100 | positive |
Culture and growth conditions
culture medium
- @ref: 22470
- name: ANAEROBACILLUS MEDIUM (DSMZ Medium 898a)
- growth: yes
- link: https://mediadive.dsmz.de/medium/898a
- composition: Name: ANAEROBACILLUS MEDIUM (DSMZ Medium 898a; with strain-specific modifications) Composition: NaCl 14.9701 g/l NaHCO3 9.98004 g/l Na2CO3 2.75449 g/l D-Mannitol 2.49501 g/l NH4Cl 0.998004 g/l Na2S x 9 H2O 0.499002 g/l Yeast extract 0.499002 g/l KH2PO4 0.199601 g/l KCl 0.199601 g/l MgCl2 x 6 H2O 0.0998004 g/l HCl 0.00249501 g/l FeCl2 x 4 H2O 0.00149701 g/l Sodium resazurin 0.000499002 g/l CoCl2 x 6 H2O 0.000189621 g/l MnCl2 x 4 H2O 9.98004e-05 g/l Pyridoxine hydrochloride 9.98004e-05 g/l ZnCl2 6.98603e-05 g/l (DL)-alpha-Lipoic acid 4.99002e-05 g/l p-Aminobenzoic acid 4.99002e-05 g/l Thiamine HCl 4.99002e-05 g/l Calcium D-(+)-pantothenate 4.99002e-05 g/l Riboflavin 4.99002e-05 g/l Nicotinic acid 4.99002e-05 g/l Na2MoO4 x 2 H2O 3.59281e-05 g/l NiCl2 x 6 H2O 2.39521e-05 g/l Folic acid 1.99601e-05 g/l Biotin 1.99601e-05 g/l H3BO3 5.98802e-06 g/l CuCl2 x 2 H2O 1.99601e-06 g/l Vitamin B12 9.98004e-07 g/l Distilled water
culture temp
- @ref: 22470
- growth: positive
- type: growth
- temperature: 35
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 22470
- oxygen tolerance: anaerobe
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | yes | 100 |
| 69480 | yes | 100 |
Isolation, sampling and environmental information
isolation
- @ref: 22470
- sample type: deposits of a low-salt soda lake
- geographic location: Siberia, Tuva Republic, lake Khadyn
- country: Russia
- origin.country: RUS
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Waste | #Solid waste |
| #Environmental | #Aquatic | #Lake (large) |
| #Condition | #Alkaline |
taxonmaps
- @ref: 69479
- File name: preview.99_7342.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_1885;97_2264;98_5385;99_7342&stattab=map
- Last taxonomy: Anaerobacillus
- 16S sequence: DQ675454
- Sequence Identity:
- Total samples: 1562
- soil counts: 346
- aquatic counts: 237
- animal counts: 952
- plant counts: 27
Safety information
risk assessment
- @ref: 22470
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 22470
- description: Anaerobacillus alkalilacustris strain Z-0521 16S ribosomal RNA gene, partial sequence
- accession: DQ675454
- length: 1516
- database: ena
- NCBI tax ID: 393763
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Anaerobacillus alkalilacustris DSM 18345 | GCA_001866005 | contig | ncbi | 393763 |
| 66792 | Anaerobacillus alkalilacustris strain DSM 18345 | 393763.5 | wgs | patric | 393763 |
| 66792 | Anaerobacillus alkalilacustris DSM 18345 | 2698536992 | draft | img | 393763 |
GC content
- @ref: 22470
- GC-content: 36.2
- method: thermal denaturation, midpoint method (Tm)
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | yes | 100 | no |
| gram-positive | yes | 86.046 | no |
| anaerobic | no | 74.76 | no |
| halophile | yes | 55.499 | no |
| spore-forming | yes | 92.629 | no |
| glucose-util | yes | 85.84 | no |
| aerobic | no | 87.722 | yes |
| motile | yes | 83.761 | no |
| flagellated | yes | 69.471 | no |
| thermophile | no | 91.341 | yes |
| glucose-ferment | no | 79.815 | no |
External links
@ref: 22470
culture collection no.: DSM 18345, DSMZ 18345, VKM B-2403
straininfo link
- @ref: 89623
- straininfo: 397382
Reference
| @id | authors | title | doi/url | catalogue | journal | pubmed |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 22470 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-18345 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 18345) | |||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | 10.1093/nar/gkaa1025 | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |||
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |||
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |||
| 89623 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID397382.1 |