Strain identifier

BacDive ID: 13117

Type strain: Yes

Species: Pseudomonas mosselii

Strain history: CIP <- 1997, M. Elomari, Med. Univ., Lille, France: strain CFML 90-83

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General

@ref: 7024

BacDive-ID: 13117

DSM-Number: 17497

keywords: genome sequence, 16S sequence, Bacteria, obligate aerobe, mesophilic, Gram-negative, motile, rod-shaped, human pathogen

description: Pseudomonas mosselii DSM 17497 is an obligate aerobe, mesophilic, Gram-negative human pathogen that was isolated from medical specimen.

NCBI tax id

NCBI tax idMatching level
78327species
1403339strain

strain history

@refhistory
7024<- D. Izard <- M. Elomari; CFML 90-83
121147CIP <- 1997, M. Elomari, Med. Univ., Lille, France: strain CFML 90-83

doi: 10.13145/bacdive13117.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas mosselii
  • full scientific name: Pseudomonas mosselii Dabboussi et al. 2002

@ref: 7024

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas mosselii

full scientific name: Pseudomonas mosselii Dabboussi et al. 2002

type strain: yes

Morphology

cell morphology

  • @ref: 121147
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

pigmentation

  • @ref: 121147
  • production: no
  • name: Pyocyanin

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
7024TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yeshttps://mediadive.dsmz.de/medium/535Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
7024NUTRIENT AGAR (DSMZ Medium 1)yeshttps://mediadive.dsmz.de/medium/1Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
34713MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
121147CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
7024positivegrowth30mesophilic
34713positivegrowth30mesophilic
121147positivegrowth5-37
121147nogrowth41thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 121147
  • oxygen tolerance: obligate aerobe

compound production

  • @ref: 7024
  • compound: siderophore

halophily

@refsaltgrowthtested relationconcentration
121147NaClpositivegrowth0-4 %
121147NaClnogrowth6 %
121147NaClnogrowth8 %
121147NaClnogrowth10 %

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate-builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose-builds acid from27082
68371sucrose-builds acid from17992
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371maltose-builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine-builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol-builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose-builds acid from16024
68371D-fructose-builds acid from15824
68371D-glucose-builds acid from17634
68371D-galactose-builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371D-ribose-builds acid from16988
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol-builds acid from17754
121147citrate+carbon source16947
121147esculin-hydrolysis4853
121147nitrate-reduction17632
121147nitrite-reduction16301
121147phenol+degradation15882
121147nitrate-respiration17632

antibiotic resistance

  • @ref: 121147
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 121147
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
121147oxidase+
121147beta-galactosidase+3.2.1.23
121147alcohol dehydrogenase-1.1.1.1
121147gelatinase-
121147amylase-
121147DNase-
121147caseinase-3.4.21.50
121147catalase+1.11.1.6
121147tween esterase-
121147lecithinase+
121147lipase-
121147lysine decarboxylase-4.1.1.18
121147ornithine decarboxylase-4.1.1.17
121147tryptophan deaminase-
121147urease-3.5.1.5
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
121147--++-+----++--------

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
121147-------------------------------------------------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
121147++--+--------------+------+----+-+-------------+++++-+--+--++++++------+++++++++++++--+-+++++++-+++

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinentisolation date
7024medical specimenFranceFRAEurope
121147Human, Tracheal aspirateFranceFRAEurope1990

isolation source categories

  • Cat1: #Infection
  • Cat2: #Patient
  • Cat3: #Specimen

taxonmaps

  • @ref: 69479
  • File name: preview.99_239.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_61;97_89;98_203;99_239&stattab=map
  • Last taxonomy: Pseudomonas
  • 16S sequence: AF072688
  • Sequence Identity:
  • Total samples: 2133
  • soil counts: 368
  • aquatic counts: 543
  • animal counts: 799
  • plant counts: 423

Safety information

risk assessment

@refpathogenicity humanbiosafety levelbiosafety level comment
7024yes, in single cases1Risk group (German classification)
1211471Risk group (French classification)

Sequence information

16S sequences

  • @ref: 7024
  • description: Pseudomonas mosselii strain CIP 105259 16S ribosomal RNA gene, complete sequence
  • accession: AF072688
  • length: 1513
  • database: ena
  • NCBI tax ID: 78327

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Pseudomonas mosselii DSM 17497GCA_019823065completencbi78327
66792Pseudomonas mosselii DSM 17497GCA_000621225scaffoldncbi1403339
66792Pseudomonas mosselii DSM 174971403339.3wgspatric1403339
66792Pseudomonas mosselii strain DSM 1749778327.27completepatric78327
66792Pseudomonas mosselii DSM 174972556921653draftimg1403339
66792Pseudomonas mosselii strain DSM 1749778327.30completepatric78327
66792Pseudomonas mosselii strain DSM 1749778327.32completepatric78327
66792Pseudomonas mosselii strain DSM 1749778327.28completepatric78327

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
flagellatedyes85.035no
gram-positiveno98.276no
anaerobicno98.303no
aerobicyes95.098no
halophileno86.402no
spore-formingno94.977no
motileyes91.36no
thermophileno99.887yes
glucose-utilyes94.101no
glucose-fermentno90.19no

External links

@ref: 7024

culture collection no.: DSM 17497, ATCC BAA99, CIP 105259, CFML 90-83

straininfo link

  • @ref: 82325
  • straininfo: 87563

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny11931144Pseudomonas mosselii sp. nov., a novel species isolated from clinical specimens.Dabboussi F, Hamze M, Singer E, Geoffroy V, Meyer JM, Izard DInt J Syst Evol Microbiol10.1099/00207713-52-2-3632002DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Genotype, Humans, Molecular Sequence Data, *Oligopeptides, Phenotype, Phylogeny, Pigments, Biological/biosynthesis, Pseudomonas/*classification/genetics/metabolism, RNA, Bacterial/analysis, RNA, Ribosomal, 16S/analysisGenetics
Phylogeny30566068Pseudomonas sichuanensis sp. nov., isolated from hospital sewage.Qin J, Hu Y, Feng Y, Xaioju L, Zong ZInt J Syst Evol Microbiol10.1099/ijsem.0.0031882018Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, *Hospitals, Nucleic Acid Hybridization, *Phylogeny, Pseudomonas/*classification/isolation & purification, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sewage/*microbiologyTranscriptome
Genetics32974501High-quality draft genome sequences of Pseudomonas monteilii DSM 14164(T), Pseudomonas mosselii DSM 17497(T), Pseudomonas plecoglossicida DSM 15088(T), Pseudomonas taiwanensis DSM 21245(T) and Pseudomonas vranovensis DSM 16006(T): taxonomic considerations.Pena A, Busquets A, Gomila M, Mulet M, Gomila RM, Garcia-Valdes E, Reddy TBK, Huntemann M, Varghese N, Ivanova N, Chen IM, Goker M, Woyke T, Klenk HP, Kyrpides N, Lalucat JAccess Microbiol10.1099/acmi.0.0000672019
Phylogeny34803984Bactericidal Effect of Pseudomonas oryziphila sp. nov., a Novel Pseudomonas Species Against Xanthomonas oryzae Reduces Disease Severity of Bacterial Leaf Streak of Rice.Yang R, Li S, Li Y, Yan Y, Fang Y, Zou L, Chen GFront Microbiol10.3389/fmicb.2021.7595362021

Reference

@idauthorscataloguedoi/urltitle
7024Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 17497)https://www.dsmz.de/collection/catalogue/details/culture/DSM-17497
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
34713Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/17259
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
82325Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID87563.1StrainInfo: A central database for resolving microbial strain identifiers
121147Curators of the CIPCollection of Institut Pasteur (CIP 105259)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105259