Strain identifier
BacDive ID: 130817
Type strain: 
Species: Fusibacter bizertensis
Strain history: M.-L. Fardeau; IRD-MIO, Aix-Marseille Univ., France; LTF Kr01.
NCBI tax ID(s): 1488331 (species)
version 9 (current version)
General
@ref: 21893
BacDive-ID: 130817
DSM-Number: 28034
keywords: 16S sequence, Bacteria, anaerobe
description: Fusibacter bizertensis DSM 28034 is an anaerobe bacterium that was isolated from drain at the bottom of a corroded kerosene storage tank.
NCBI tax id
- NCBI tax id: 1488331
- Matching level: species
strain history
| @ref | history |
|---|---|
| 21893 | <- M.-L. Fardeau, Lab. Microbiol. de l'IRD/ESIL, Univ. de Provence et de la Méditerranée, Marseille, France; LTF Kr01 <- L. Smii {2012} |
| 67770 | M.-L. Fardeau; IRD-MIO, Aix-Marseille Univ., France; LTF Kr01. |
doi: 10.13145/bacdive130817.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Eubacteriales, not assigned to family
- genus: Fusibacter
- species: Fusibacter bizertensis
- full scientific name: Fusibacter bizertensis Smii et al. 2015
@ref: 21893
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridia, not assigned to order
family: Clostridia, not assigned to family
genus: Fusibacter
species: Fusibacter bizertensis
full scientific name: Fusibacter bizertensis Smii et al. 2015
type strain: yes
Culture and growth conditions
culture medium
- @ref: 21893
- name: FUSIBACTER BIZERTENSIS MEDIUM (DSMZ Medium 853b)
- growth: yes
- link: https://mediadive.dsmz.de/medium/853b
- composition: Name: FUSIBACTER BIZERTENSIS MEDIUM (DSMZ Medium 853b) Composition: D-Glucose 3.56436 g/l Na2S2O3 x 5 H2O 3.12871 g/l Na2CO3 1.48515 g/l NH4Cl 0.990099 g/l Trypticase peptone 0.990099 g/l Yeast extract 0.990099 g/l L-Cysteine HCl x H2O 0.49505 g/l MgCl2 x 6 H2O 0.49505 g/l KH2PO4 0.29703 g/l K2HPO4 0.29703 g/l Na2S x 9 H2O 0.29703 g/l KCl 0.0990099 g/l MgSO4 x 7 H2O 0.029703 g/l Nitrilotriacetic acid 0.0148515 g/l NaCl 0.00990099 g/l MnSO4 x H2O 0.00495049 g/l ZnSO4 x 7 H2O 0.00178218 g/l CoSO4 x 7 H2O 0.00178218 g/l CaCl2 x 2 H2O 0.000990099 g/l FeSO4 x 7 H2O 0.000990099 g/l Sodium resazurin 0.00049505 g/l NiCl2 x 6 H2O 0.00029703 g/l AlK(SO4)2 x 12 H2O 0.00019802 g/l Na2MoO4 x 2 H2O 9.90099e-05 g/l CuSO4 x 5 H2O 9.90099e-05 g/l H3BO3 9.90099e-05 g/l Na2WO4 x 2 H2O 3.9604e-06 g/l Na2SeO3 x 5 H2O 2.9703e-06 g/l Distilled water
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 21893 | positive | growth | 30 |
| 67770 | positive | growth | 30 |
Physiology and metabolism
oxygen tolerance
- @ref: 21893
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 21893 | drain at the bottom of a corroded kerosene storage tank | Bizerte | Tunisia | TUN | Africa |
| 67770 | Drain at the bottom of a corroded kerosene storage tank of the Société Tunisienne des Industries des Raffinage, Bizerte, northern Tunisia | Bizerte | Tunisia | TUN | Africa |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Built environment | |
| #Engineered | #Built environment | #Container (Reservoir) |
| #Engineered | #Industrial | #Oil reservoir |
taxonmaps
- @ref: 69479
- File name: preview.99_85980.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_615;96_5469;97_19608;98_59523;99_85980&stattab=map
- Last taxonomy: Fusibacter bizertensis subclade
- 16S sequence: KJ420408
- Sequence Identity:
- Total samples: 241
- soil counts: 12
- aquatic counts: 202
- animal counts: 22
- plant counts: 5
Safety information
risk assessment
- @ref: 21893
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 21893
- description: Fusibacter bizertensis strain LTF Kr01 16S ribosomal RNA gene, partial sequence
- accession: KJ420408
- length: 1516
- database: nuccore
- NCBI tax ID: 1488331
GC content
- @ref: 21893
- GC-content: 37.4
- method: high performance liquid chromatography (HPLC)
External links
@ref: 21893
culture collection no.: DSM 28034, JCM 19376, LTF Kr01
straininfo link
- @ref: 89305
- straininfo: 399631
literature
- topic: Phylogeny
- Pubmed-ID: 25294821
- title: Fusibacter bizertensis sp. nov., isolated from a corroded kerosene storage tank.
- authors: Smii L, Ben Hania W, Cayol JL, Joseph M, Hamdi M, Ollivier B, Fardeau ML
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.066183-0
- year: 2014
- mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Gram-Positive Bacteria/*classification/genetics/isolation & purification, *Kerosene, Molecular Sequence Data, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Tunisia
- topic2: Genetics
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 21893 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-28034 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28034) | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 89305 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID399631.1 |