Strain identifier
BacDive ID: 130764
Type strain:
Species: Vibrio rhizosphaerae
Strain Designation: MSSRF7
Strain history: <- S. Nair, M.S. Swaminathan Research Foundation, Taramani, India <- N. Ramesh Kumar, M.S. Swaminathan Research Foundation, Taramani, India
NCBI tax ID(s): 398736 (species)
General
@ref: 21978
BacDive-ID: 130764
DSM-Number: 18601
keywords: 16S sequence, Bacteria
description: Vibrio rhizosphaerae MSSRF7 is a bacterium that was isolated from rhizosphere of mangrove Porteresia coarctata.
NCBI tax id
- NCBI tax id: 398736
- Matching level: species
strain history
- @ref: 21978
- history: <- S. Nair, M.S. Swaminathan Research Foundation, Taramani, India <- N. Ramesh Kumar, M.S. Swaminathan Research Foundation, Taramani, India
doi: 10.13145/bacdive130764.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Vibrionales
- family: Vibrionaceae
- genus: Vibrio
- species: Vibrio rhizosphaerae
- full scientific name: Vibrio rhizosphaerae Ramesh Kumar and Nair 2007
@ref: 21978
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Vibrionales, not validated
family: Vibrionaceae
genus: Vibrio
species: Vibrio rhizosphaerae
full scientific name: Vibrio rhizosphaerae Ramesh Kumar and Nair 2007
strain designation: MSSRF7
type strain: no
Isolation, sampling and environmental information
isolation
- @ref: 21978
- sample type: rhizosphere of mangrove Porteresia coarctata
- host species: Porteresia coarctata
- geographic location: Pichavaram, Tamil Nadu
- country: India
- origin.country: IND
- continent: Asia
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Aquatic | #Mangrove |
#Host | #Plants | #Herbaceous plants (Grass,Crops) |
#Host Body-Site | #Plant | #Rhizosphere |
Safety information
risk assessment
- @ref: 21978
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 21978
- description: Vibrio indicus strain MSSRF7 16S ribosomal RNA gene, partial sequence
- accession: DQ847122
- length: 1374
- database: ena
- NCBI tax ID: 398735
External links
@ref: 21978
culture collection no.: DSM 18601
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
21978 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-18601 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 18601) |