Strain identifier

BacDive ID: 130761

Type strain: No

Species: Vibrio sp.

Strain Designation: B-11245, VNB-15

Strain history: <- S. Khrulnova, State Res. Inst. of Genetics and Selection of Ind. Microorganisms, Moscow, Russia; VNB-15 <- M.A. Sazykina

NCBI tax ID(s): 678 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 21975

BacDive-ID: 130761

DSM-Number: 26054

keywords: 16S sequence, Bacteria, mesophilic

description: Vibrio sp. B-11245 is a mesophilic bacterium that was isolated from sea water of Black Sea.

NCBI tax id

  • NCBI tax id: 678
  • Matching level: species

strain history

  • @ref: 21975
  • history: <- S. Khrulnova, State Res. Inst. of Genetics and Selection of Ind. Microorganisms, Moscow, Russia; VNB-15 <- M.A. Sazykina

doi: 10.13145/bacdive130761.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio sp.
  • full scientific name: Vibrio Pacini 1854 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Beneckea
    20215Allomonas
    20215Lucibacterium

@ref: 21975

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales, not validated

family: Vibrionaceae

genus: Vibrio

species: Vibrio sp.

full scientific name: Vibrio sp.

strain designation: B-11245, VNB-15

type strain: no

Culture and growth conditions

culture medium

  • @ref: 21975
  • name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/514
  • composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

culture temp

  • @ref: 21975
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 21975
  • sample type: sea water of Black Sea
  • geographic location: region of Abrau Durso
  • country: Russia
  • origin.country: RUS
  • continent: Europe
  • latitude: 44.6767
  • longitude: 37.5636

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic
  • Cat3: #Marine

taxonmaps

  • @ref: 69479
  • File name: preview.99_1344.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_14;96_71;97_74;98_81;99_1344&stattab=map
  • Last taxonomy: Vibrio
  • 16S sequence: JQ319117
  • Sequence Identity:
  • Total samples: 345
  • soil counts: 4
  • aquatic counts: 169
  • animal counts: 159
  • plant counts: 13

Sequence information

16S sequences

  • @ref: 21975
  • description: Vibrio sp. VNB-15 16S ribosomal RNA gene, partial sequence
  • accession: JQ319117
  • length: 1440
  • database: ena
  • NCBI tax ID: 1168058

External links

@ref: 21975

culture collection no.: DSM 26054

straininfo link

  • @ref: 89258
  • straininfo: 401494

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
21975Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-26054Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26054)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
89258Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID401494.1