Strain identifier
BacDive ID: 130761
Type strain:
Species: Vibrio sp.
Strain Designation: B-11245, VNB-15
Strain history: <- S. Khrulnova, State Res. Inst. of Genetics and Selection of Ind. Microorganisms, Moscow, Russia; VNB-15 <- M.A. Sazykina
NCBI tax ID(s): 678 (species)
General
@ref: 21975
BacDive-ID: 130761
DSM-Number: 26054
keywords: 16S sequence, Bacteria, mesophilic
description: Vibrio sp. B-11245 is a mesophilic bacterium that was isolated from sea water of Black Sea.
NCBI tax id
- NCBI tax id: 678
- Matching level: species
strain history
- @ref: 21975
- history: <- S. Khrulnova, State Res. Inst. of Genetics and Selection of Ind. Microorganisms, Moscow, Russia; VNB-15 <- M.A. Sazykina
doi: 10.13145/bacdive130761.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Vibrionales
- family: Vibrionaceae
- genus: Vibrio
- species: Vibrio sp.
- full scientific name: Vibrio Pacini 1854 (Approved Lists 1980)
synonyms
@ref synonym 20215 Beneckea 20215 Allomonas 20215 Lucibacterium
@ref: 21975
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Vibrionales, not validated
family: Vibrionaceae
genus: Vibrio
species: Vibrio sp.
full scientific name: Vibrio sp.
strain designation: B-11245, VNB-15
type strain: no
Culture and growth conditions
culture medium
- @ref: 21975
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 21975
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 21975
- sample type: sea water of Black Sea
- geographic location: region of Abrau Durso
- country: Russia
- origin.country: RUS
- continent: Europe
- latitude: 44.6767
- longitude: 37.5636
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Marine
taxonmaps
- @ref: 69479
- File name: preview.99_1344.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_14;96_71;97_74;98_81;99_1344&stattab=map
- Last taxonomy: Vibrio
- 16S sequence: JQ319117
- Sequence Identity:
- Total samples: 345
- soil counts: 4
- aquatic counts: 169
- animal counts: 159
- plant counts: 13
Sequence information
16S sequences
- @ref: 21975
- description: Vibrio sp. VNB-15 16S ribosomal RNA gene, partial sequence
- accession: JQ319117
- length: 1440
- database: ena
- NCBI tax ID: 1168058
External links
@ref: 21975
culture collection no.: DSM 26054
straininfo link
- @ref: 89258
- straininfo: 401494
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
21975 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-26054 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26054) | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
89258 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID401494.1 |