Strain identifier

BacDive ID: 130718

Type strain: Yes

Species: Streptomyces baliensis

Strain Designation: ID03-0915

Strain history: <- NBRC; NBRC 104276 <- M. Otoguro, NITE and Y. Widyastuti, LIPI; ID03-0915

NCBI tax ID(s): 542764 (species)

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General

@ref: 21951

BacDive-ID: 130718

DSM-Number: 42011

keywords: 16S sequence, Bacteria, aerobe, spore-forming, mesophilic, Gram-positive

description: Streptomyces baliensis ID03-0915 is an aerobe, spore-forming, mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 542764
  • Matching level: species

strain history

  • @ref: 21951
  • history: <- NBRC; NBRC 104276 <- M. Otoguro, NITE and Y. Widyastuti, LIPI; ID03-0915

doi: 10.13145/bacdive130718.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces baliensis
  • full scientific name: Streptomyces baliensis Otoguro et al. 2009

@ref: 21951

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces baliensis

full scientific name: Streptomyces baliensis Otoguro et al. 2009

strain designation: ID03-0915

type strain: yes

Morphology

cell morphology

  • @ref: 29139
  • gram stain: positive

pigmentation

  • @ref: 29139
  • production: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
21951STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)yeshttps://mediadive.dsmz.de/medium/252Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water
21951ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://mediadive.dsmz.de/medium/84Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
21951GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
21951positivegrowth28mesophilic
29139positivegrowth10-30
29139positiveoptimum28mesophilic

culture pH

  • @ref: 29139
  • ability: positive
  • type: optimum
  • pH: 7

Physiology and metabolism

oxygen tolerance

  • @ref: 29139
  • oxygen tolerance: aerobe

spore formation

  • @ref: 29139
  • spore formation: yes

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
2913922599arabinose+carbon source
2913928757fructose+carbon source
2913928260galactose+carbon source
2913917234glucose+carbon source
2913917716lactose+carbon source
2913929864mannitol+carbon source
2913937684mannose+carbon source
2913928053melibiose+carbon source
2913916634raffinose+carbon source
2913926546rhamnose+carbon source
2913917992sucrose+carbon source
2913918222xylose+carbon source

Isolation, sampling and environmental information

isolation

  • @ref: 21951
  • sample type: soil
  • geographic location: Bali Island,Eka Karya Botanic Garden,
  • country: Indonesia
  • origin.country: IDN
  • continent: Asia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 21951
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 21951
  • description: Streptomyces baliensis gene for 16S rRNA, partial sequence, strain: NBRC 104276 (= BTCC B607)
  • accession: AB441718
  • length: 1480
  • database: ena
  • NCBI tax ID: 542764

GC content

  • @ref: 21951
  • GC-content: 71.1

External links

@ref: 21951

culture collection no.: DSM 42011, BTCC B608, NBRC 104276

straininfo link

  • @ref: 89225
  • straininfo: 400122

literature

  • topic: Phylogeny
  • Pubmed-ID: 19605704
  • title: Streptomyces baliensis sp. nov., isolated from Balinese soil.
  • authors: Otoguro M, Ratnakomala S, Lestari Y, Hastuti RD, Triana E, Widyastuti Y, Ando K
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.007179-0
  • year: 2009
  • mesh: Bacterial Typing Techniques, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Indonesia, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/genetics/*isolation & purification
  • topic2: Genetics

Reference

@idauthorstitledoi/urlcatalogueID_cross_referencepubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
21951Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-42011Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 42011)
29139Barberan A, Caceres Velazquez H, Jones S, Fierer N.Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information10.1128/mSphere.00237-172556328776041
89225Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID400122.1