Strain identifier

BacDive ID: 130620

Type strain: No

Species: Roseovarius sp.

Strain Designation: EG13

Strain history: <- V. Yurkov, Dept. Microbiol., Univ. Manitoba, Winnipeg, Canada; EG13 <- J. T. Csotonyi

NCBI tax ID(s): 1486281 (species)

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General

@ref: 21765

BacDive-ID: 130620

DSM-Number: 23345

keywords: 16S sequence, Bacteria

description: Roseovarius sp. EG13 is a bacterium that was isolated from brine spring.

NCBI tax id

  • NCBI tax id: 1486281
  • Matching level: species

strain history

  • @ref: 21765
  • history: <- V. Yurkov, Dept. Microbiol., Univ. Manitoba, Winnipeg, Canada; EG13 <- J. T. Csotonyi

doi: 10.13145/bacdive130620.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Rhodobacterales
  • family: Roseobacteraceae
  • genus: Roseovarius
  • species: Roseovarius sp.
  • full scientific name: Roseovarius Labrenz et al. 1999

@ref: 21765

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhodobacterales

family: Rhodobacteraceae

genus: Roseovarius

species: Roseovarius sp.

full scientific name: Roseovarius sp.

strain designation: EG13

type strain: no

Culture and growth conditions

culture medium

  • @ref: 21765
  • name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/514
  • composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

culture temp

  • @ref: 21765
  • growth: positive
  • type: growth
  • temperature: 28

Isolation, sampling and environmental information

isolation

  • @ref: 21765
  • sample type: brine spring
  • geographic location: Manitoba, Swan River, East German Creek
  • country: Canada
  • origin.country: CAN
  • continent: North America

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Spring
#Condition#Saline

taxonmaps

  • @ref: 69479
  • File name: preview.99_88316.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_19;96_3328;97_4084;98_5222;99_88316&stattab=map
  • Last taxonomy: Roseovarius tolerans subclade
  • 16S sequence: AM691102
  • Sequence Identity:
  • Total samples: 88
  • soil counts: 11
  • aquatic counts: 75
  • animal counts: 2

Sequence information

16S sequences

  • @ref: 21765
  • description: Uncultured Rhodobacteraceae bacterium 16S rRNA gene, isolate EG13
  • accession: AM691102
  • length: 1446
  • database: nuccore
  • NCBI tax ID: 157276

External links

@ref: 21765

culture collection no.: DSM 23345

straininfo link

  • @ref: 89134
  • straininfo: 400055

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
21765Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-23345Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23345)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
89134Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID400055.1