Strain identifier

BacDive ID: 130594

Type strain: No

Species: Kaistia sp.

Strain Designation: 17

Strain history: <- ATCC; ATCC 27833 <- J. T. Staley, Univ. of Washington, Seattle, USA; 17. Deposited as a strain of Prosthecomicrobium sp.

NCBI tax ID(s): 1873500 (species)

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General

@ref: 21609

BacDive-ID: 130594

DSM-Number: 8896

keywords: 16S sequence, Bacteria, mesophilic

description: Kaistia sp. 17 is a mesophilic bacterium that was isolated from Bitter Lake.

NCBI tax id

  • NCBI tax id: 1873500
  • Matching level: species

strain history

  • @ref: 21609
  • history: <- ATCC; ATCC 27833 <- J. T. Staley, Univ. of Washington, Seattle, USA; 17. Deposited as a strain of Prosthecomicrobium sp.

doi: 10.13145/bacdive130594.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Hyphomicrobiales
  • family: Kaistiaceae
  • genus: Kaistia
  • species: Kaistia sp.
  • full scientific name: Kaistia Im et al. 2005

@ref: 21609

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhizobiales

family: Kaistiaceae

genus: Kaistia

species: Kaistia sp.

full scientific name: Kaistia sp.

strain designation: 17

type strain: no

Culture and growth conditions

culture medium

  • @ref: 21609
  • name: MMB MEDIUM (DSMZ Medium 628)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/628
  • composition: Name: MMB MEDIUM (DSMZ Medium 628) Composition: Glucose 1.0 g/l MgSO4 x 7 H2O 0.594 g/l (NH4)2SO4 0.25 g/l Nitrilotriacetic acid 0.2 g/l Yeast extract 0.15 g/l Peptone 0.15 g/l CaCl2 x 2 H2O 0.0667 g/l ZnSO4 x 7 H2O 0.001095 g/l FeSO4 x 7 H2O 0.0005 g/l Na-EDTA 0.00025 g/l (NH4)6Mo7O24 x 4 H2O 0.000185 g/l MnSO4 x H2O 0.000154 g/l Calcium pantothenate 5e-05 g/l Pyridoxine hydrochloride 5e-05 g/l Riboflavin 5e-05 g/l Nicotinamide 5e-05 g/l Thiamine-HCl x 2 H2O 5e-05 g/l CuSO4 x 5 H2O 3.92e-05 g/l Co(NO3)2 x 6 H2O 2.48e-05 g/l Biotin 2e-05 g/l Folic acid 2e-05 g/l Na2B4O7 x 10 H2O 1.77e-05 g/l Vitamin B12 1e-06 g/l Distilled water

culture temp

  • @ref: 21609
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 21609
  • sample type: Bitter Lake
  • geographic location: Washington
  • country: USA
  • origin.country: USA
  • continent: North America

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic
  • Cat3: #Lake (large)

taxonmaps

  • @ref: 69479
  • File name: preview.99_74944.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_5;96_31789;97_40222;98_52404;99_74944&stattab=map
  • Last taxonomy: Hyphomicrobiales
  • 16S sequence: GQ221767
  • Sequence Identity:
  • Total samples: 311
  • soil counts: 34
  • aquatic counts: 150
  • animal counts: 22
  • plant counts: 105

Sequence information

16S sequences

  • @ref: 21609
  • description: Prosthecomicrobium sp. ATCC 27833 16S ribosomal RNA gene, partial sequence
  • accession: GQ221767
  • length: 1426
  • database: ena
  • NCBI tax ID: 665130

External links

@ref: 21609

culture collection no.: DSM 8896, ATCC 27833

straininfo link

  • @ref: 89109
  • straininfo: 39205

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
21609Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-8896Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 8896)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
89109Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID39205.1