Strain identifier
BacDive ID: 130594
Type strain:
Species: Kaistia sp.
Strain Designation: 17
Strain history: <- ATCC; ATCC 27833 <- J. T. Staley, Univ. of Washington, Seattle, USA; 17. Deposited as a strain of Prosthecomicrobium sp.
NCBI tax ID(s): 1873500 (species)
General
@ref: 21609
BacDive-ID: 130594
DSM-Number: 8896
keywords: 16S sequence, Bacteria, mesophilic
description: Kaistia sp. 17 is a mesophilic bacterium that was isolated from Bitter Lake.
NCBI tax id
- NCBI tax id: 1873500
- Matching level: species
strain history
- @ref: 21609
- history: <- ATCC; ATCC 27833 <- J. T. Staley, Univ. of Washington, Seattle, USA; 17. Deposited as a strain of Prosthecomicrobium sp.
doi: 10.13145/bacdive130594.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Kaistiaceae
- genus: Kaistia
- species: Kaistia sp.
- full scientific name: Kaistia Im et al. 2005
@ref: 21609
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhizobiales
family: Kaistiaceae
genus: Kaistia
species: Kaistia sp.
full scientific name: Kaistia sp.
strain designation: 17
type strain: no
Culture and growth conditions
culture medium
- @ref: 21609
- name: MMB MEDIUM (DSMZ Medium 628)
- growth: yes
- link: https://mediadive.dsmz.de/medium/628
- composition: Name: MMB MEDIUM (DSMZ Medium 628) Composition: Glucose 1.0 g/l MgSO4 x 7 H2O 0.594 g/l (NH4)2SO4 0.25 g/l Nitrilotriacetic acid 0.2 g/l Yeast extract 0.15 g/l Peptone 0.15 g/l CaCl2 x 2 H2O 0.0667 g/l ZnSO4 x 7 H2O 0.001095 g/l FeSO4 x 7 H2O 0.0005 g/l Na-EDTA 0.00025 g/l (NH4)6Mo7O24 x 4 H2O 0.000185 g/l MnSO4 x H2O 0.000154 g/l Calcium pantothenate 5e-05 g/l Pyridoxine hydrochloride 5e-05 g/l Riboflavin 5e-05 g/l Nicotinamide 5e-05 g/l Thiamine-HCl x 2 H2O 5e-05 g/l CuSO4 x 5 H2O 3.92e-05 g/l Co(NO3)2 x 6 H2O 2.48e-05 g/l Biotin 2e-05 g/l Folic acid 2e-05 g/l Na2B4O7 x 10 H2O 1.77e-05 g/l Vitamin B12 1e-06 g/l Distilled water
culture temp
- @ref: 21609
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 21609
- sample type: Bitter Lake
- geographic location: Washington
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Lake (large)
taxonmaps
- @ref: 69479
- File name: preview.99_74944.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_5;96_31789;97_40222;98_52404;99_74944&stattab=map
- Last taxonomy: Hyphomicrobiales
- 16S sequence: GQ221767
- Sequence Identity:
- Total samples: 311
- soil counts: 34
- aquatic counts: 150
- animal counts: 22
- plant counts: 105
Sequence information
16S sequences
- @ref: 21609
- description: Prosthecomicrobium sp. ATCC 27833 16S ribosomal RNA gene, partial sequence
- accession: GQ221767
- length: 1426
- database: ena
- NCBI tax ID: 665130
External links
@ref: 21609
culture collection no.: DSM 8896, ATCC 27833
straininfo link
- @ref: 89109
- straininfo: 39205
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
21609 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-8896 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 8896) | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
89109 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID39205.1 |