Strain identifier

BacDive ID: 130589

Type strain: Yes

Species: Prauserella isguenensis

Strain Designation: H225

Strain history: <- N. Sabaou, LBSM, Ecole Normale Supérieure, Kouba, Alger, Algeria; H225

NCBI tax ID(s): 1470180 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 21732

BacDive-ID: 130589

DSM-Number: 46664

keywords: genome sequence, 16S sequence, Bacteria, mesophilic

description: Prauserella isguenensis H225 is a mesophilic bacterium that was isolated from desert soil.

NCBI tax id

  • NCBI tax id: 1470180
  • Matching level: species

strain history

  • @ref: 21732
  • history: <- N. Sabaou, LBSM, Ecole Normale Supérieure, Kouba, Alger, Algeria; H225

doi: 10.13145/bacdive130589.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Pseudonocardiales
  • family: Pseudonocardiaceae
  • genus: Prauserella
  • species: Prauserella isguenensis
  • full scientific name: Prauserella isguenensis Saker et al. 2015

@ref: 21732

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Pseudonocardiaceae

genus: Prauserella

species: Prauserella isguenensis

full scientific name: Prauserella isguenensis Saker et al. 2015

strain designation: H225

type strain: yes

Morphology

cell morphology

@refmotilityconfidencegram stain
69480no93.144
69480100positive

multimedia

  • @ref: 21732
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_46664.jpg
  • caption: Medium 1504 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

  • @ref: 21732
  • name: CM-MEDIUM (DSMZ Medium 1504)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1504
  • composition: Name: CM MEDIUM (DSMZ Medium 1504) Composition: NaCl 150.0 g/l Agar 20.0 g/l MgSO4 x 7 H2O 10.0 g/l Yeast extract 10.0 g/l Peptone 7.5 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l FeSO4 x 7 H2O Distilled water

culture temp

  • @ref: 21732
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 21732
  • sample type: desert soil
  • geographic location: Sahara, Mzab region, region of Ahbas (32° 27' N 3° 41' E) at Béni-Isguen (Ghardaia)
  • country: Algeria
  • origin.country: DZA
  • continent: Africa
  • latitude: 32.45
  • longitude: 3.6833

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Desert
#Environmental#Terrestrial#Soil
#Condition#Xerophilic

taxonmaps

  • @ref: 69479
  • File name: preview.99_41937.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_10;96_3364;97_4129;98_30482;99_41937&stattab=map
  • Last taxonomy: Prauserella
  • 16S sequence: KJ504173
  • Sequence Identity:
  • Total samples: 322
  • soil counts: 41
  • aquatic counts: 15
  • animal counts: 255
  • plant counts: 11

Safety information

risk assessment

  • @ref: 21732
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 21732
  • description: Prauserella isguenensis strain H225 16S ribosomal RNA gene, partial sequence
  • accession: KJ504173
  • length: 1441
  • database: ena
  • NCBI tax ID: 1470180

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Prauserella isguenensis CECT 8577GCA_014191605scaffoldncbi1470180
66792Prauserella isguenensis strain CECT 85771470180.3wgspatric1470180
66792Prauserella isguenensis CECT 85772824246350draftimg1470180

GC content

  • @ref: 21732
  • GC-content: 70.4
  • method: high performance liquid chromatography (HPLC)

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingyes79no
flagellatedno97.098no
gram-positiveyes90.737no
anaerobicno98.648no
aerobicyes92.891no
halophileyes80.866no
spore-formingyes62.425no
glucose-utilyes89.512no
thermophileno97.026yes
motileno90.496no
glucose-fermentno90.9no

External links

@ref: 21732

culture collection no.: DSM 46664, CECT 8577

straininfo link

  • @ref: 89104
  • straininfo: 405355

literature

  • topic: Phylogeny
  • Pubmed-ID: 25713039
  • title: Prauserella isguenensis sp. nov., a halophilic actinomycete isolated from desert soil.
  • authors: Saker R, Bouras N, Meklat A, Zitouni A, Schumann P, Sproer C, Sabaou N, Klenk HP
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.000145
  • year: 2015
  • mesh: Actinomycetales/*classification/genetics/isolation & purification, Algeria, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, *Desert Climate, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Molecular Sequence Data, Nucleic Acid Hybridization, Phosphatidylethanolamines/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/chemistry
  • topic2: Genetics

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
21732Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-46664Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46664)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
89104Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID405355.1