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Strain identifier

BacDive ID: 130416

Type strain: Yes

Species: Labedella endophytica

Strain history: <- Wenjun Li, EGI 6500705

NCBI tax ID(s): 1523160 (species)

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@ref: 22059

BacDive-ID: 130416

DSM-Number: 28746

keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic

description: Labedella endophytica DSM 28746 is an aerobe, mesophilic bacterium that was isolated from stem of a healthy halophyte sample of Anabasis eliator Schischk.

NCBI tax id

  • NCBI tax id: 1523160
  • Matching level: species

strain history

22059<- W.-J. Li, YIM; EGI 6500705 <- H. Wang, CAS, Xinjiang Inst. of Ecology and Geography
67770W.-J. Li EGI 6500705.
67771<- Wenjun Li, EGI 6500705

doi: 10.13145/bacdive130416.20230509.8

Name and taxonomic classification


  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Microbacteriaceae
  • genus: Labedella
  • species: Labedella endophytica
  • full scientific name: Labedella endophytica Wang et al. 2015

@ref: 22059

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Microbacteriaceae

genus: Labedella

species: Labedella endophytica

full scientific name: Labedella endophytica Wang et al. 2015

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 22059
  • growth: yes
  • link:
  • composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp


Physiology and metabolism

oxygen tolerance

  • @ref: 67771
  • oxygen tolerance: aerobe


  • @ref: 67770
  • observation: quinones: MK-9, MK-10, MK-11

Isolation, sampling and environmental information


@refsample typehost speciesgeographic locationcountryorigin.countrycontinent
22059stem of a healthy halophyte sample of Anabasis eliator (C. A. Mey.) SchischkAnabasis elatiorXinjiang Province, UrumqiChinaCHNAsia
67770Stem of a healthy halophyte Anabasis elatior (C. A. Mey.) SchischkAnabasis elatiorsuburban district of Urumqi, Xinjiang Province, north-west ChinaChinaCHNAsia

isolation source categories

#Host#Plants#Herbaceous plants (Grass,Crops)
#Host#Plants#Shrub (Scrub)
#Host Body-Site#Plant#Stem (Branch)

Safety information

risk assessment

  • @ref: 22059
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 22059
  • description: Labedella endophytica strain EGI 6500705 16S ribosomal RNA gene, partial sequence
  • accession: KM095501
  • length: 1542
  • database: ena
  • NCBI tax ID: 1523160

Genome sequences

  • @ref: 67770
  • description: Labedella endophytica EGI 6500705
  • accession: GCA_003990045
  • assembly level: contig
  • database: ncbi
  • NCBI tax ID: 1523160

GC content

  • @ref: 22059
  • GC-content: 69.2
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 22059

culture collection no.: DSM 28746, CPCC 203961, JCM 30092, KCTC 29494, EGI 6500705


Phylogeny25331338Labedella endophytica sp. nov., a novel endophytic actinobacterium isolated from stem of Anabasis elatior (C. A. Mey.) Schischk.Wang HF, Zhang YG, Cheng J, Hozzein WN, Liu WH, Li L, Chen JY, Guo JW, Zhang YM, Li WJAntonie Van Leeuwenhoek10.1007/s10482-014-0307-02014Actinobacteria/*classification/*isolation & purification, Amaranthaceae/*microbiology, Bacterial Typing Techniques, Base Composition, Catalase/metabolism, Cell Wall/chemistry, China, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Endophytes/*classification/*isolation & purification, Fatty Acids/analysis, Microscopy, Electron, Scanning, Molecular Sequence Data, Ornithine/analysis, Oxidoreductases/metabolism, Phylogeny, Pigments, Biological/metabolism, Plant Stems/microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vitamin K 2/analysisEnzymology
Phylogeny31402073Labedella phragmitis sp. nov. and Labedella populi sp. nov., two endophytic actinobacteria isolated from plants in the Taklamakan Desert and emended description of the genus Labedella.Li FN, Lu Q, Liao SL, Jin T, Li W, Sun CHSyst Appl Microbiol10.1016/j.syapm.2019.1260042019Actinobacteria/chemistry/*classification/genetics, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial/genetics, Genome, Bacterial/genetics, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, Plants/*microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Species Specificity, Vitamin K 2/chemistryGenetics


20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
22059Curators of the DSMZ Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28746)
67770Curators of the JCM
67771Curators of the KCTC