Strain identifier
BacDive ID: 130296
Type strain: 
Species: Erwinia typographi
Strain Designation: Y4
Strain history: <- V. Skrodenyte-Arbaciauskiene, Inst. Ecology, Vilnius Univ., Lithuania; Y4
NCBI tax ID(s): 371042 (species)
General
@ref: 21587
BacDive-ID: 130296
DSM-Number: 24222
keywords: 16S sequence, Bacteria, mesophilic
description: Erwinia typographi Y4 is a mesophilic bacterium that was isolated from gut of bark beetle Ips typographus.
NCBI tax id
- NCBI tax id: 371042
- Matching level: species
strain history
- @ref: 21587
- history: <- V. Skrodenyte-Arbaciauskiene, Inst. Ecology, Vilnius Univ., Lithuania; Y4
doi: 10.13145/bacdive130296.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Erwiniaceae
- genus: Erwinia
- species: Erwinia typographi
- full scientific name: Erwinia typographi Skrodenyt?-Arba?iauskien? et al. 2012
@ref: 21587
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacteriales, not validated
family: Erwiniaceae
genus: Erwinia
species: Erwinia typographi
full scientific name: Erwinia typographi Skrodenyt?-Arba?iauskien? et al. 2012
strain designation: Y4
type strain: no
Morphology
multimedia
- @ref: 21587
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_24222.jpg
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
- @ref: 21587
- name: REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1a
- composition: Name: REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
- @ref: 21587
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 21587
- sample type: gut of bark beetle Ips typographus
- host species: Ips typographus
- geographic location: Prienai district
- country: Lithuania
- origin.country: LTU
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Arthropoda | #Insecta |
| #Host Body-Site | #Gastrointestinal tract | #Stomach |
Safety information
risk assessment
- @ref: 21587
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 21587
- description: Erwinia typographi strain Y4 16S ribosomal RNA gene, partial sequence
- accession: HQ540302
- length: 1406
- database: ena
- NCBI tax ID: 371042
External links
@ref: 21587
culture collection no.: DSM 24222
straininfo link
- @ref: 88831
- straininfo: 403785
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 21587 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-24222 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 24222) | |
| 88831 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID403785.1 |