Strain identifier

BacDive ID: 130274

Type strain: No

Species: Deinococcus sahariens

Strain history: <- J. P. Touzel and H. Bouraoui, INRA, France; Han 23

NCBI tax ID(s): 47478 (species)

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General

@ref: 21570

BacDive-ID: 130274

DSM-Number: 18496

keywords: 16S sequence, Bacteria, mesophilic

description: Deinococcus sahariens DSM 18496 is a mesophilic bacterium that was isolated from water, hot spring.

NCBI tax id

  • NCBI tax id: 47478
  • Matching level: species

strain history

  • @ref: 21570
  • history: <- J. P. Touzel and H. Bouraoui, INRA, France; Han 23

doi: 10.13145/bacdive130274.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/deinococcota
  • domain: Bacteria
  • phylum: Deinococcota
  • class: Deinococci
  • order: Deinococcales
  • family: Deinococcaceae
  • genus: Deinococcus
  • species: Deinococcus sahariens
  • full scientific name: Deinococcus sahariens Bouraoui et al. 2012

@ref: 21570

domain: Bacteria

phylum: Deinococcus-Thermus

class: Deinococci

order: Deinococcales

family: Deinococcaceae

genus: Deinococcus

species: Deinococcus sp.

full scientific name: Deinococcus sp.

type strain: no

Culture and growth conditions

culture medium

  • @ref: 21570
  • name: R2A MEDIUM (DSMZ Medium 830)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/830
  • composition: Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

culture temp

  • @ref: 21570
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 21570
  • sample type: water, hot spring
  • geographic location: Kebili, Jemna
  • country: Tunisia
  • origin.country: TUN
  • continent: Africa

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Thermal spring
#Condition#Thermophilic (>45°C)

taxonmaps

  • @ref: 69479
  • File name: preview.99_2391.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15362;96_1289;97_1530;98_1863;99_2391&stattab=map
  • Last taxonomy: Deinococcus sahariens subclade
  • 16S sequence: AM283039
  • Sequence Identity:
  • Total samples: 281
  • soil counts: 30
  • aquatic counts: 52
  • animal counts: 171
  • plant counts: 28

Sequence information

16S sequences

  • @ref: 21570
  • description: Deinococcus sahariens partial 16S rRNA gene, type strain Han23T
  • accession: AM283039
  • length: 1498
  • database: ena
  • NCBI tax ID: 391359

GC content

  • @ref: 21570
  • GC-content: 66.9

External links

@ref: 21570

culture collection no.: DSM 18496, LMG 23756, Han 23

straininfo link

  • @ref: 88811
  • straininfo: 399822

literature

  • topic: Phylogeny
  • Pubmed-ID: 22012026
  • title: Characterization of Deinococcus sahariens sp. nov., a radiation-resistant bacterium isolated from a Saharan hot spring.
  • authors: Bouraoui H, Aissa MB, Abbassi F, Touzel JP, O'donohue M, Manai M
  • journal: Arch Microbiol
  • DOI: 10.1007/s00203-011-0762-1
  • year: 2011
  • mesh: Base Composition, DNA, Bacterial/chemistry, Deinococcus/*classification/isolation & purification/*radiation effects, Fatty Acids/analysis, Hot Springs/*microbiology, Phylogeny, *Radiation Tolerance, Tunisia, Ultraviolet Rays
  • topic2: Enzymology

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
21570Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-18496Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 18496)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
88811Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID399822.1