Strain identifier
BacDive ID: 130203
Type strain: 
Species: Geobacillus icigianus
Strain Designation: G1w1
Strain history: <- S. Peltek, Inst. of Cytology and Genetics, Novosibirks, Russia; G1w1 <- A.V. Bryanskaya
NCBI tax ID(s): 1430331 (species)
version 8.1 (current version)
General
@ref: 21894
BacDive-ID: 130203
DSM-Number: 28325
keywords: genome sequence, 16S sequence, Bacteria, thermophilic
description: Geobacillus icigianus G1w1 is a thermophilic bacterium that was isolated from water–sludge sample of an hydrothermal geyser outlet.
NCBI tax id
- NCBI tax id: 1430331
- Matching level: species
strain history
- @ref: 21894
- history: <- S. Peltek, Inst. of Cytology and Genetics, Novosibirks, Russia; G1w1 <- A.V. Bryanskaya
doi: 10.13145/bacdive130203.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Geobacillus
- species: Geobacillus icigianus
- full scientific name: Geobacillus icigianus Bryanskaya et al. 2015
@ref: 21894
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Geobacillus
species: Geobacillus icigianus
full scientific name: Geobacillus icigianus Bryanskaya et al. 2015
strain designation: G1w1
type strain: yes
Culture and growth conditions
culture medium
- @ref: 21894
- name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
- growth: yes
- link: https://mediadive.dsmz.de/medium/220
- composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
culture temp
- @ref: 21894
- growth: positive
- type: growth
- temperature: 55
- range: thermophilic
Isolation, sampling and environmental information
isolation
- @ref: 21894
- sample type: water–sludge sample of an hydrothermal geyser outlet
- geographic location: Kamchatka, Valley of Geysers, Troinoy geyser
- country: Russia
- origin.country: RUS
- continent: Asia
- latitude: 54.4306
- longitude: 160.139
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Mud (Sludge) |
| #Condition | #Thermophilic (>45°C) |
taxonmaps
- @ref: 69479
- File name: preview.99_453.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_79;96_191;97_207;98_231;99_453&stattab=map
- Last taxonomy: Geobacillus
- 16S sequence: KF631430
- Sequence Identity:
- Total samples: 652
- soil counts: 220
- aquatic counts: 92
- animal counts: 311
- plant counts: 29
Safety information
risk assessment
- @ref: 21894
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 21894
- description: Geobacillus icigianus strain G1w1 16S ribosomal RNA gene, partial sequence
- accession: KF631430
- length: 1306
- database: ena
- NCBI tax ID: 1430331
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Geobacillus icigianus G1w1 | GCA_000750005 | contig | ncbi | 1430331 |
| 66792 | Geobacillus icigianus G1w1 | 2751185842 | draft | img | 1430331 |
GC content
- @ref: 21894
- GC-content: 52
- method: sequence analysis
External links
@ref: 21894
culture collection no.: DSM 28325, VKM B-2853
straininfo link
- @ref: 88749
- straininfo: 401376
literature
- topic: Phylogeny
- Pubmed-ID: 25514918
- title: Geobacillus icigianus sp. nov., a thermophilic bacterium isolated from a hot spring.
- authors: Bryanskaya AV, Rozanov AS, Slynko NM, Shekhovtsov SV, Peltek SE
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.000029
- year: 2014
- mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, Geobacillus/*classification/genetics/isolation & purification, Hot Springs/*microbiology, Molecular Sequence Data, *Phylogeny, RNA, Ribosomal, 16S/genetics, Russia, Sequence Analysis, DNA
- topic2: Genetics
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 21894 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-28325 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28325) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 88749 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID401376.1 |