Strain identifier
BacDive ID: 130164
Type strain:
Species: Bacillus licheniformis
Strain Designation: SHG10
Strain history: <- A. M. Embaby, Univ. of Alexandria, Dept. of Biotechnol., Egypt; SHG10
NCBI tax ID(s): 1402 (species)
General
@ref: 21492
BacDive-ID: 130164
DSM-Number: 28096
keywords: genome sequence, Bacteria, mesophilic, human pathogen
description: Bacillus licheniformis SHG10 is a mesophilic human pathogen that was isolated from soil.
NCBI tax id
- NCBI tax id: 1402
- Matching level: species
strain history
- @ref: 21492
- history: <- A. M. Embaby, Univ. of Alexandria, Dept. of Biotechnol., Egypt; SHG10
doi: 10.13145/bacdive130164.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Bacillus
- species: Bacillus licheniformis
- full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Clostridium licheniforme
@ref: 21492
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Bacillus
species: Bacillus licheniformis
full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901
strain designation: SHG10
type strain: no
Culture and growth conditions
culture medium
- @ref: 21492
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
- @ref: 21492
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 21492
- sample type: soil
- country: Egypt
- origin.country: EGY
- continent: Africa
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 21492
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
- @ref: 66792
- description: Bacillus subtilis DSM 28096
- accession: GCA_029537055
- assembly level: complete
- database: ncbi
- NCBI tax ID: 1423
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
motile | yes | 90.586 | no |
flagellated | yes | 89.086 | no |
gram-positive | yes | 91.8 | no |
anaerobic | no | 99.138 | no |
aerobic | yes | 90.549 | no |
halophile | yes | 85.68 | no |
spore-forming | yes | 96.823 | no |
glucose-ferment | no | 91.167 | no |
thermophile | no | 97.335 | no |
glucose-util | yes | 89.414 | no |
External links
@ref: 21492
culture collection no.: DSM 28096
straininfo link
- @ref: 88716
- straininfo: 398615
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Biotechnology | 25077057 | Raw agro-industrial orange peel waste as a low cost effective inducer for alkaline polygalacturonase production from Bacillus licheniformis SHG10. | Embaby AM, Masoud AA, Marey HS, Shaban NZ, Ghonaim TM | Springerplus | 10.1186/2193-1801-3-327 | 2014 | ||
Enzymology | 27334682 | SHG10 keratinolytic alkaline protease from Bacillus licheniformis SHG10 DSM 28096: Robust stability and unusual non-cumbersome purification. | Embaby AM, Saeed H, Hussein A | J Basic Microbiol | 10.1002/jobm.201600073 | 2016 | Bacillus licheniformis/*enzymology, Bacterial Proteins/*chemistry/*isolation & purification/metabolism, DEAE-Cellulose, Detergents/metabolism, Electrophoresis, Polyacrylamide Gel, Endopeptidases/*chemistry/*isolation & purification/metabolism, Enzyme Stability, Hydrogen-Ion Concentration, Keratins/*metabolism, Kinetics, Molecular Weight, Substrate Specificity | Metabolism |
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
21492 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-28096 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28096) | |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
88716 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID398615.1 |