Strain identifier

BacDive ID: 130160

Type strain: No

Species: Anoxybacillus sp.

Strain Designation: JS1

Strain history: S. K. Das JS1.

NCBI tax ID(s): 1872573 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 21476

BacDive-ID: 130160

DSM-Number: 27374

keywords: genome sequence, 16S sequence, Bacteria, spore-forming, thermophilic, motile

description: Anoxybacillus sp. JS1 is a spore-forming, thermophilic, motile bacterium that was isolated from hotspring.

NCBI tax id

  • NCBI tax id: 1872573
  • Matching level: species

strain history

@refhistory
21476<- S. K. Das, Inst. Life Sci., Bhubaneswar, India; JS1
67770S. K. Das JS1.

doi: 10.13145/bacdive130160.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Anoxybacillus
  • species: Anoxybacillus sp.
  • full scientific name: Anoxybacillus Pikuta et al. 2000

@ref: 21476

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Anoxybacillus

species: Anoxybacillus sp.

full scientific name: Anoxybacillus sp.

strain designation: JS1

type strain: no

Morphology

cell morphology

@refmotilityconfidencegram stain
69480yes97.442
69480100positive

Culture and growth conditions

culture temp

@refgrowthtypetemperaturerangeconfidence
67770positivegrowth50thermophilic
69480thermophilic99.649

Physiology and metabolism

spore formation

@refspore formationconfidence
69481yes100
69480yes100

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
21476hotspringJharkand, SurajkundIndiaINDAsia
67770Hot spring at SuryakundJharkhandIndiaINDAsia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic
  • Cat3: #Thermal spring

taxonmaps

  • @ref: 69479
  • File name: preview.99_4145.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_79;96_465;97_1979;98_2434;99_4145&stattab=map
  • Last taxonomy: Anoxybacillus
  • 16S sequence: KC958552
  • Sequence Identity:
  • Total samples: 1640
  • soil counts: 74
  • aquatic counts: 273
  • animal counts: 1269
  • plant counts: 24

Sequence information

16S sequences

  • @ref: 21476
  • description: Anoxybacillus suryakundensis strain JS1 16S ribosomal RNA gene, partial sequence
  • accession: KC958552
  • length: 1435
  • database: ena
  • NCBI tax ID: 1325335

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Anoxybacillus suryakundensis strain DSM 273741325335.3wgspatric1325335
66792Anoxybacillus suryakundensis DSM 273742615840616draftimg1325335
67770Anoxybacillus suryakundensis DSM 27374GCA_001517225scaffoldncbi1325335
67770Anoxybacillus suryakundensis DSM 27374GCA_001418025scaffoldncbi1325335

GC content

@refGC-contentmethod
2147642.1
6777042.1high performance liquid chromatography (HPLC)

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingyes100no
motileyes89.575no
gram-positiveyes85.462no
anaerobicno93.448no
halophileno89.342no
spore-formingyes95.572no
glucose-utilyes90.423no
aerobicyes51.971no
flagellatedyes71.357no
thermophileyes99.592yes
glucose-fermentno86.712no

External links

@ref: 21476

culture collection no.: DSM 27374, JCM 19211, LMG 27616

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
21476Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-27374Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 27374)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1