Strain identifier

BacDive ID: 130156

Type strain: Yes

Species: Marinobacter similis

Strain Designation: A3d10

Culture col. no.: DSM 27079, CIP 110589, JCM 19398, KMM 7501

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 22045

BacDive-ID: 130156

DSM-Number: 27079

keywords: 16S sequence, genome sequence, Bacteria, mesophilic

description: Marinobacter similis A3d10 is a mesophilic bacterium that was isolated from sea water collected one metre below the water surface.

strain history: <- E. P. Ivanova, Swinburne Univ. Technol., IRIS, Hawthorn, Australia; A3d10

doi: 10.13145/bacdive130156.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Gammaproteobacteria
  • order: Alteromonadales
  • family: Alteromonadaceae
  • genus: Marinobacter
  • species: Marinobacter similis
  • full scientific name: Marinobacter similis Ng et al. 2015

@ref: 22045

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Alteromonadales

family: Alteromonadaceae

genus: Marinobacter

species: Marinobacter similis

full scientific name: Marinobacter similis Ng et al. 2015

strain designation: A3d10

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 22045
  • name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium514.pdf

culture temp

  • @ref: 22045
  • growth: positive
  • type: growth
  • temperature: 25
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 22045
  • sample type: sea water collected one metre below the water surface
  • geographic location: Pacific Ocean, Tasman Sea, Port Philip Bay, St Kilda Beach (37°51'50''S 144°58'55''E)
  • country: Australia
  • origin.country: AUS
  • continent: Australia and Oceania
  • latitude: -37.8639
  • longitude: 144.982

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic
  • Cat3: #Marine

Safety information

risk assessment

  • @ref: 22045
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 22045
  • description: Marinobacter similis strain A3d10 16S ribosomal RNA gene, partial sequence
  • accession: KJ547704
  • length: 1532
  • database: ena
  • NCBI tax ID: 1420916

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Marinobacter similis A3d10GCA_000830985completencbi1420916
66792Marinobacter similis A3d101420916.4completepatric1420916

GC content

  • @ref: 22045
  • GC-content: 57.6
  • method: sequence analysis

External links

@ref: 22045

culture collection no.: DSM 27079, CIP 110589, JCM 19398, KMM 7501

Reference

@idauthorstitledoi/urlcatalogue
20215D.Gleim, M.Kracht, N.Weiss et. al.Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes sincehttp://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html
22045Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-27079Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 27079)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes