Strain identifier
BacDive ID: 13012
Type strain: 
Species: Pseudomonas stutzeri
Strain Designation: No. 3
Strain history: <- IMET <- CCM <- F. Pichinoty; 3
NCBI tax ID(s): 203192 (species), 316 (species)
version 8.1 (current version)
General
@ref: 12524
BacDive-ID: 13012
DSM-Number: 46326
keywords: Bacteria, mesophilic, human pathogen
description: Pseudomonas stutzeri No. 3 is a mesophilic human pathogen that was isolated from soil.
NCBI tax id
| NCBI tax id | Matching level |
|---|---|
| 203192 | species |
| 316 | species |
strain history
- @ref: 12524
- history: <- IMET <- CCM <- F. Pichinoty; 3
doi: 10.13145/bacdive13012.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Pseudomonadaceae
- genus: Pseudomonas
- species: Pseudomonas stutzeri
- full scientific name: Pseudomonas stutzeri (Lehmann and Neumann 1896) Sijderius 1946 (Approved Lists 1980)
synonyms
@ref synonym 20215 Stutzerimonas chloritidismutans 20215 Pseudomonas perfectomarinus 20215 Bacterium stutzeri 20215 Pseudomonas kunmingensis 20215 Pseudomonas chloritidismutans 20215 Stutzerimonas kunmingensis 20215 Stutzerimonas stutzeri 20215 Stutzerimonas perfectomarina 20215 Pseudomonas perfectomarina
@ref: 12524
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Pseudomonadaceae
genus: Pseudomonas
species: Pseudomonas stutzeri
full scientific name: Pseudomonas stutzeri (Lehmann and Neumann 1896) Sijderius 1946
strain designation: No. 3
type strain: no
Culture and growth conditions
culture medium
- @ref: 12524
- name: ORGANIC MEDIUM 79 (DSMZ Medium 426)
- growth: yes
- link: https://mediadive.dsmz.de/medium/426
- composition: Name: ORGANIC MEDIUM 79 (DSMZ Medium 426) Composition: Agar 15.0 g/l Peptone 10.0 g/l Dextrose 10.0 g/l NaCl 6.0 g/l Yeast extract 2.0 g/l Casein peptone 2.0 g/l Distilled water
culture temp
- @ref: 12524
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68369 | 25115 | malate | + | assimilation |
| 68369 | 17128 | adipate | - | assimilation |
| 68369 | 27689 | decanoate | + | assimilation |
| 68369 | 24265 | gluconate | + | assimilation |
| 68369 | 17306 | maltose | + | assimilation |
| 68369 | 59640 | N-acetylglucosamine | - | assimilation |
| 68369 | 16899 | D-mannitol | - | assimilation |
| 68369 | 16024 | D-mannose | - | assimilation |
| 68369 | 30849 | L-arabinose | - | assimilation |
| 68369 | 17634 | D-glucose | + | assimilation |
| 68369 | 5291 | gelatin | - | hydrolysis |
| 68369 | 4853 | esculin | - | hydrolysis |
| 68369 | 16199 | urea | - | hydrolysis |
| 68369 | 29016 | arginine | - | hydrolysis |
| 68369 | 17634 | D-glucose | - | fermentation |
| 68369 | 27897 | tryptophan | - | energy source |
| 68369 | 17632 | nitrate | + | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68369 | cytochrome oxidase | + | 1.9.3.1 |
| 68369 | gelatinase | - | |
| 68369 | beta-glucosidase | - | 3.2.1.21 |
| 68369 | urease | - | 3.5.1.5 |
| 68369 | arginine dihydrolase | - | 3.5.3.6 |
API 20NE
| @ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46914 | + | - | - | - | - | - | - | - | + | - | - | - | - | + | + | + | - | + | + | - | + |
| 12524 | + | - | - | - | - | - | - | - | + | - | - | - | - | + | + | + | - | + | + | - | + |
Isolation, sampling and environmental information
isolation
| @ref | sample type |
|---|---|
| 12524 | soil |
| 46914 | Soil |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 12524
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
GC content
- @ref: 12524
- GC-content: 65.0
External links
@ref: 12524
culture collection no.: DSM 46326, CCM 2896, IMET 11157, CCUG 18844
straininfo link
- @ref: 82222
- straininfo: 50811
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 12524 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46326) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-46326 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 46914 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 18844) | https://www.ccug.se/strain?id=18844 | |
| 68369 | Automatically annotated from API 20NE | |||
| 82222 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID50811.1 | StrainInfo: A central database for resolving microbial strain identifiers |