Strain identifier
BacDive ID: 12886
Type strain: 
Species: Pseudomonas putida
Strain Designation: PaW736, pWW60-22
NCBI tax ID(s): 303 (species)
version 8.1 (current version)
General
@ref: 1646
BacDive-ID: 12886
DSM-Number: 4302
keywords: Bacteria
description: Pseudomonas putida PaW736 is a bacterium of the family Pseudomonadaceae.
NCBI tax id
- NCBI tax id: 303
- Matching level: species
doi: 10.13145/bacdive12886.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Pseudomonadaceae
- genus: Pseudomonas
- species: Pseudomonas putida
- full scientific name: Pseudomonas putida (Trevisan 1889) Migula 1895 (Approved Lists 1980)
synonyms
@ref synonym 20215 Bacillus putidus 20215 Arthrobacter siderocapsulatus
@ref: 1646
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Pseudomonadales
family: Micrococcaceae
genus: Pseudomonas
species: Pseudomonas putida
full scientific name: Pseudomonas putida (Trevisan 1889) Migula 1895
strain designation: PaW736, pWW60-22
type strain: no
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68369 | 25115 | malate | + | assimilation |
| 68369 | 17128 | adipate | - | assimilation |
| 68369 | 27689 | decanoate | + | assimilation |
| 68369 | 24265 | gluconate | + | assimilation |
| 68369 | 17306 | maltose | - | assimilation |
| 68369 | 59640 | N-acetylglucosamine | - | assimilation |
| 68369 | 16899 | D-mannitol | - | assimilation |
| 68369 | 16024 | D-mannose | + | assimilation |
| 68369 | 30849 | L-arabinose | - | assimilation |
| 68369 | 17634 | D-glucose | + | assimilation |
| 68369 | 5291 | gelatin | - | hydrolysis |
| 68369 | 4853 | esculin | - | hydrolysis |
| 68369 | 16199 | urea | - | hydrolysis |
| 68369 | 29016 | arginine | + | hydrolysis |
| 68369 | 17634 | D-glucose | - | fermentation |
| 68369 | 27897 | tryptophan | - | energy source |
| 68369 | 17632 | nitrate | - | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68369 | cytochrome oxidase | + | 1.9.3.1 |
| 68369 | gelatinase | - | |
| 68369 | beta-glucosidase | - | 3.2.1.21 |
| 68369 | urease | - | 3.5.1.5 |
| 68369 | arginine dihydrolase | + | 3.5.3.6 |
API 20NE
| @ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1646 | - | - | - | + | - | - | - | - | + | - | + | - | - | - | + | + | - | + | + | + | + |
| 1646 | - | - | - | + | - | - | - | - | + | - | + | - | - | - | + | + | - | + | + | + | + |
Safety information
risk assessment
- @ref: 1646
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
External links
@ref: 1646
culture collection no.: DSM 4302, NCIB 12199
straininfo link
- @ref: 82099
- straininfo: 112667
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Enzymology | 3254935 | Comparison of the meta pathway operons on NAH plasmid pWW60-22 and TOL plasmid pWW53-4 and its evolutionary significance. | Assinder SJ, Williams PA | J Gen Microbiol | 10.1099/00221287-134-10-2769 | 1988 | Biological Evolution, Cloning, Molecular, DNA/genetics, Genes, Regulator, *Genes, Viral, Naphthalenes, Nucleic Acid Hybridization, *Operon, *Plasmids, Pseudomonas/*genetics, Recombination, Genetic, Restriction Mapping, Salicylates, Salicylic Acid | Phylogeny |
| Metabolism | 10220903 | Detection of polycyclic aromatic hydrocarbon degradation genes in different soil bacteria by polymerase chain reaction and DNA hybridization. | Hamann C, Hegemann J, Hildebrandt A | FEMS Microbiol Lett | 10.1111/j.1574-6968.1999.tb13510.x | 1999 | Bacteria/*enzymology/*genetics/isolation & purification, Biodegradation, Environmental, *Genes, Bacterial, Nucleic Acid Hybridization/genetics, Oxygenases/*genetics, Polycyclic Aromatic Hydrocarbons/*metabolism, Polymerase Chain Reaction/methods, *Soil Microbiology | Enzymology |
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 1646 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 4302) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-4302 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 68369 | Automatically annotated from API 20NE | |||
| 82099 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID112667.1 | StrainInfo: A central database for resolving microbial strain identifiers |