Archive BacDiveID:10.13145/bacdive12758.20230509.8.1

Strain identifier

BacDive ID: 12758

Type strain:

Species: Pseudomonas aeruginosa

Strain Designation: PRD-10

Strain history: CIP <- 1992, DSM <- ATCC <- A. Beloian: strain PRD-10 <- L.G. Herman

NCBI tax ID(s): 1424337 (strain), 287 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 476

BacDive-ID: 12758

DSM-Number: 939

keywords: genome sequence, 16S sequence, Bacteria, obligate aerobe, mesophilic, motile, human pathogen

description: Pseudomonas aeruginosa PRD-10 is an obligate aerobe, mesophilic, motile human pathogen that was isolated from animal room water bottle.

NCBI tax id

NCBI tax id	Matching level
1424337	strain
287	species

strain history

@ref	history
476	<- ATCC; ATCC 15442 <- A. Beloian, USDA, United States Dept. Agric.; PRD-10 <- L. Herman, NIH;
116083	CIP <- 1992, DSM <- ATCC <- A. Beloian: strain PRD-10 <- L.G. Herman

doi: 10.13145/bacdive12758.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/pseudomonadota
domain: Bacteria
phylum: Pseudomonadota
class: Gammaproteobacteria
order: Pseudomonadales
family: Pseudomonadaceae
genus: Pseudomonas
species: Pseudomonas aeruginosa
full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacterium aeruginosum

@ref: 476

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas aeruginosa

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900

strain designation: PRD-10

type strain: no

Morphology

cell morphology

@ref	motility	confidence	gram stain	cell shape
69480	yes	99.354
69480		99.988	negative
116083	yes		negative	rod-shaped

pigmentation

@ref: 116083
production: no
name: Pyocyanin

Culture and growth conditions

culture medium

@ref	name	growth	link	composition
476	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	yes	https://mediadive.dsmz.de/medium/693	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
476	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	yes	https://mediadive.dsmz.de/medium/92	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
41730	MEDIUM 29- Brain heart agar	yes		Distilled water make up to (1000.000 ml);Brain heart infusion agar (52.000 g)
116083	CIP Medium 29	yes	https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=29
116083	CIP Medium 72	yes	https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@ref	growth	type	temperature	range
476	positive	growth	30	mesophilic
41730	positive	growth	30	mesophilic
476	positive	growth	37	mesophilic
116083	positive	growth	10-41
116083	no	growth	5	psychrophilic

Physiology and metabolism

oxygen tolerance

@ref: 116083
oxygen tolerance: obligate aerobe

spore formation

@ref	spore formation	confidence
69481	no	100
69480	no	99.944

compound production

@ref: 476
compound: poly(ß-hydroxyalkanoic acids)

halophily

@ref	salt	growth	tested relation	concentration
116083	NaCl	positive	growth	0-6 %
116083	NaCl	no	growth	8 %
116083	NaCl	no	growth	10 %

metabolite utilization

@ref	Chebi-ID	metabolite	utilization activity	kind of utilization tested
68369	25115	malate	+	assimilation
68369	17128	adipate	+	assimilation
68369	27689	decanoate	+	assimilation
68369	24265	gluconate	+	assimilation
68369	17306	maltose	-	assimilation
68369	59640	N-acetylglucosamine	+	assimilation
68369	16899	D-mannitol	+	assimilation
68369	16024	D-mannose	-	assimilation
68369	30849	L-arabinose	-	assimilation
68369	5291	gelatin	+	hydrolysis
68369	4853	esculin	-	hydrolysis
68369	29016	arginine	+	hydrolysis
68369	17634	D-glucose	-	fermentation
116083	16947	citrate	+	carbon source
116083	4853	esculin	-	hydrolysis
116083	17632	nitrate	+	reduction
116083	16301	nitrite	+	reduction
116083	15882	phenol	+	degradation
116083	17632	nitrate	+	respiration

metabolite production

@ref: 116083
Chebi-ID: 35581
metabolite: indole
production: no

enzymes

@ref	value	activity	ec
68369	cytochrome oxidase	+	1.9.3.1
68369	gelatinase	+
68369	beta-glucosidase	-	3.2.1.21
68369	arginine dihydrolase	+	3.5.3.6
116083	oxidase	+
116083	beta-galactosidase	-	3.2.1.23
116083	alcohol dehydrogenase	+	1.1.1.1
116083	gelatinase	+
116083	amylase	-
116083	caseinase	+	3.4.21.50
116083	catalase	+	1.11.1.6
116083	lecithinase	-
116083	lysine decarboxylase	-	4.1.1.18
116083	ornithine decarboxylase	-	4.1.1.17
116083	tryptophan deaminase	-
116083	urease	+	3.5.1.5
68382	alkaline phosphatase	+	3.1.3.1
68382	esterase (C 4)	+
68382	esterase lipase (C 8)	+
68382	lipase (C 14)	+
68382	leucine arylamidase	+	3.4.11.1
68382	valine arylamidase	-
68382	cystine arylamidase	-	3.4.11.3
68382	alpha-chymotrypsin	-	3.4.21.1
68382	acid phosphatase	+	3.1.3.2
68382	naphthol-AS-BI-phosphohydrolase	+
68382	alpha-galactosidase	-	3.2.1.22
68382	beta-galactosidase	-	3.2.1.23
68382	beta-glucuronidase	-	3.2.1.31
68382	alpha-glucosidase	-	3.2.1.20
68382	beta-glucosidase	-	3.2.1.21
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52
68382	alpha-mannosidase	-	3.2.1.24
68382	alpha-fucosidase	-	3.2.1.51

fatty acid profile

fatty acids

@ref	fatty acid	percentage	ECL
44477	C12:0	4.1	12
44477	C14:0	0.6	14
44477	C15:0	0.6	15
44477	C16:0	29.1	16
44477	C18:0	0.6	18
44477	C10:0 3OH	3.6	11.423
44477	C12:0 2OH	6	13.178
44477	C12:0 3OH	3.7	13.455
44477	C16:1 ω7c	14.6	15.819
44477	C17:0 CYCLO	2.5	16.888
44477	C18:1 ω7c /12t/9t	31.2	17.824
44477	C18:2 ω6,9c/C18:0 ANTE	0.3	17.724
44477	C19:0 CYCLO ω8c	3.3	18.9

type of FA analysis: whole cell analysis
method/protocol: CCUG

API zym

@ref	Control	Alkaline phosphatase	Esterase	Esterase Lipase	Lipase	Leucine arylamidase	Valine arylamidase	Cystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
44477	-	+	+	+	+	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-
116083	-	+	+	+	+	+	-	-	+	-	+	+	-	-	-	-	-	-	-	-

API 20NE

@ref	NO3	TRP	GLU_ Ferm	ADH Arg	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
476	-	-	-	+	+	-	+	-	+	-	-	+	+	-	+	+	+	+	+	-	+
476	-	-	-	+	-	-	+	-	+	-	-	+	+	-	+	+	+	+	+	-	+
476	+	-	-	+	+	-	+	-	+	-	-	+	+	-	+	+	+	+	+	-	+
44477	+	-	-	+	-	-	+	-	+	-	-	+	+	-	+	+	+	+	+	-	+
476	+	-	-	+	-	-	+	-	+	-	-	+	+	-	+	+	+	+	+	-	+
476	-	+	-	+	+	-	+	-	+/-	-	-	+	+	-	+	+	+	+	+	-	+
476	-	-	-	+	+	-	+	-	+	-	-	+	+	-	+	+	+	+	+	-	+

API biotype100

@ref	GLU	FRU	GAL	TRE	MNE	SBE	MEL	SAC	RAF	MTE	MAL	LAC	LTE	MbGa	MaGa	CEL	GEN	MbGu	ESC	RIB	ARA	XYL	PLE	RHA	FUC	MLZ	DARL	LARL	XLT	DUL	TAG	GLY	INO	MAN	MTL	TUR	SOR	ADO	HBG	LYX	ERY	MDG	3MDG	SAT	MUC	LTAT	DTAT	MTAT	DMLT	LMLT	CATE	TATE	TTE	CIT	GRT	GAT	2KG	5KG	TRY	NAG	GNT	PAC	PAT	pOBE	QAT	GTE	mOBE	BAT	PPAT	CMT	TGE	BET	PCE	ABT	HIN	LAT	CAP	CYT	HIS	SUC	FUM	GRE	GYT	AVT	ETN	TTN	GLN	ITA	3OBU	APT	GTT	PRO	DALA	LALA	SER	MNT	PROP	TYR	2KT
116083	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

isolation

@ref	sample type	country	origin.country	continent
476	animal room water bottle
44477	Water bottle,animal-room
116083	Other, Animal room water bottle	United States of America	USA	North America

isolation source categories

Cat1	Cat2
#Engineered
#Environmental	#Aquatic
#Host

taxonmaps

@ref: 69479
File name: preview.99_42.png
url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_36;97_37;98_40;99_42&stattab=map
Last taxonomy: Pseudomonas aeruginosa
16S sequence: AF094718
Sequence Identity:
Total samples: 22757
soil counts: 1669
aquatic counts: 5046
animal counts: 14748
plant counts: 1294

Safety information

risk assessment

@ref	pathogenicity human	pathogenicity animal	biosafety level	biosafety level comment
476	yes	yes	2	Risk group (German classification)
116083			2	Risk group (French classification)

Sequence information

16S sequences

@ref	description	accession	length	database	NCBI tax ID
20218	Pseudomonas aeruginosa strain ATCC 15442 16S ribosomal RNA gene, partial sequence	AF094718	1470	ena	287
20218	Pseudomonas aeruginosa partial gene for 16S ribosomal RNA, strain ATCC 15442	Z22989	199	ena	287

Genome sequences

@ref	description	accession	assembly level	database	NCBI tax ID
66792	Pseudomonas aeruginosa PRD-10	GCA_005154325	chromosome	ncbi	287
66792	Pseudomonas aeruginosa ATCC 15442	GCA_001373915	contig	ncbi	287
66792	Pseudomonas aeruginosa ATCC 15442	GCA_000504485	contig	ncbi	1424337
66792	Pseudomonas aeruginosa ATCC 15442	1424337.3	wgs	patric	1424337
66792	Pseudomonas aeruginosa strain ATCC 15442	287.1890	wgs	patric	287
66792	Pseudomonas aeruginosa strain PRD-10	287.9378	complete	patric	287
66792	Pseudomonas aeruginosa PRD-10	2917032606	complete	img	287
66792	Pseudomonas aeruginosa ATCC 15442	2576861223	draft	img	1424337

Genome-based predictions

predictions

trait	prediction	confidence	training_data
spore-forming	no	100	no
gram-positive	no	98.341	no
anaerobic	no	98.295	no
halophile	no	91.628	no
spore-forming	no	92.766	no
glucose-util	yes	89.612	no
motile	yes	90.148	no
flagellated	yes	85.471	no
aerobic	yes	92.664	no
thermophile	no	99.801	yes
glucose-ferment	no	90.558	no

External links

@ref: 476

culture collection no.: DSM 939, ATCC 15442, NCIB 10421, CCUG 2080, IFO 13736, CIP 103467, NCIMB 10421, PCI 812

straininfo link

@ref: 81967
straininfo: 3894

literature

topic	Pubmed-ID	title	authors	journal	DOI	year	mesh	topic2
Pathogenicity	2120768	[Microbiological evaluation of chemical disinfectants for household use].	Timenetsky J	Rev Saude Publica	10.1590/s0034-89101990000100008	1990	Disinfectants/pharmacology, Disinfection, Evaluation Studies as Topic, Household Products, Pseudomonas aeruginosa/drug effects, Salmonella/drug effects, Staphylococcus aureus/*drug effects
Pathogenicity	2497711	Pseudomonas pellicle in disinfectant testing: electron microscopy, pellicle removal, and effect on test results.	Cole EC, Rutala WA, Carson JL, Alfano EM	Appl Environ Microbiol	10.1128/aem.55.2.511-513.1989	1989	Disinfectants/pharmacology, Drug Evaluation, Preclinical/methods, Microscopy, Electron, Scanning/methods, Pseudomonas aeruginosa/drug effects/ultrastructure
Pathogenicity	2515584	[Phenolic coefficient in the microbiological evaluation of disinfectants for hospital and household use].	Timenetsky J, Alterthum F	Rev Saude Publica	10.1590/s0034-89101989000200011	1989	Disinfectants/analysis/pharmacology, Phenols/analysis, Pseudomonas aeruginosa/drug effects, Salmonella/drug effects, Staphylococcus aureus/drug effects
Pathogenicity	3123412	Ineffectiveness of hospital disinfectants against bacteria: a collaborative study.	Rutala WA, Cole EC	Infect Control	10.1017/s0195941700067564	1987	Disinfectants/pharmacology, Hospitals, Microbial Sensitivity Tests, Pseudomonas aeruginosa/drug effects, Salmonella/drug effects, Staphylococcus aureus/drug effects
Cultivation	3142165	[The growth and lipopolysaccharide production of Escherichia coli and Pseudomonas aeruginosa].	Weber-Frick C, Schmidt-Lorenz W	Zentralbl Bakteriol Mikrobiol Hyg B		1988	Colony Count, Microbial, Culture Media, Escherichia coli/growth & development/metabolism, Limulus Test, Lipopolysaccharides/biosynthesis, Pseudomonas aeruginosa/*growth & development/metabolism	Metabolism
Cultivation	3305474	Standardization of bacterial numbers of penicylinders used in disinfectant testing: interlaboratory study.	Cole EC, Rutala WA, Samsa GP	J Assoc Off Anal Chem		1987	Bacteria/drug effects, Bacteriological Techniques/instrumentation, Culture Media, Disinfectants/*pharmacology/standards	Pathogenicity
Enzymology	4995850	Potentially infectious agents associated with shearling bedpads: effect of laundering with detergent-disinfectant combinations on Staphylococcus aureus and Pseudomonas aeruginosa.	Wilkoff LJ, Dixon GJ, Westbrook L, Happich WF	Appl Microbiol	10.1128/am.21.4.647-652.1971	1971	Aldehydes/pharmacology, Animals, Anti-Bacterial Agents/pharmacology, Bacteriological Techniques, Bedding and Linens, Detergents/pharmacology, Drug Resistance, Microbial, Laundering, Phenols/pharmacology, Pseudomonas aeruginosa/drug effects/isolation & purification, Quaternary Ammonium Compounds/pharmacology, Skin, Staphylococcus/drug effects/isolation & purification, *Wool	Phylogeny
Pathogenicity	6424918	[Efficacy of 8 disinfectants on 3 types of surfaces contaminated by Pseudomonas aeruginosa].	Gelinas P, Goulet J	Can J Microbiol		1983	Acids/pharmacology, Aluminum, Anions, Chlorhexidine/pharmacology, Disinfectants/pharmacology, Disinfection, Glutaral/pharmacology, Iodophors/pharmacology, Plastics, Pseudomonas aeruginosa/drug effects, Quaternary Ammonium Compounds/pharmacology, Sodium Hypochlorite/pharmacology, Stainless Steel
Metabolism	8031099	Effect of a Pseudomonas rhamnolipid biosurfactant on cell hydrophobicity and biodegradation of octadecane.	Zhang Y, Miller RM	Appl Environ Microbiol	10.1128/aem.60.6.2101-2106.1994	1994	Alkanes/metabolism, Bacterial Adhesion/physiology, Bacterial Proteins/chemistry/pharmacology, Biodegradation, Environmental, Pseudomonas aeruginosa/metabolism, Species Specificity, Surface-Active Agents/chemistry/pharmacology	Phylogeny
Pathogenicity	8728618	Comparative disinfectant efficacy of two disinfecting solutions against Pseudomonas aeruginosa.	Key JE, Monnat K	CLAO J		1996	Colony-Forming Units Assay, Contact Lens Solutions/pharmacology, Contact Lenses, Equipment Contamination, Microbial Sensitivity Tests, Pseudomonas aeruginosa/drug effects, Time Factors
Pathogenicity	10315053	Disinfection of anesthesia and respiratory therapy equipment with acid glutaraldehyde solution.	Lin KS, Park MK, Baker HA, Sidorowicz A	Respir Care		1979	Aldehydes/standards, Anesthesiology/instrumentation, Disinfection/methods, Evaluation Studies as Topic, Glutaral/standards, Hospitals, Humans, Reference Standards, Respiratory Therapy/instrumentation, Statistics as Topic, Sterilization/*methods, United States
Pathogenicity	10347880	Adaptation of Pseudomonas aeruginosa ATCC 15442 to didecyldimethylammonium bromide induces changes in membrane fatty acid composition and in resistance of cells.	Mechin L, Dubois-Brissonnet F, Heyd B, Leveau JY	J Appl Microbiol	10.1046/j.1365-2672.1999.00770.x	1999	Adaptation, Biological, Drug Resistance, Microbial, Fatty Acids/analysis, Pseudomonas aeruginosa/chemistry/drug effects, Quaternary Ammonium Compounds/pharmacology
Lipids	10594715	Specific variations of fatty acid composition of Pseudomonas aeruginosa ATCC 15442 induced by quaternary ammonium compounds and relation with resistance to bactericidal activity.	Guerin-Mechin L, Dubois-Brissonnet F, Heyd B, Leveau JY	J Appl Microbiol	10.1046/j.1365-2672.1999.00919.x	1999	Adaptation, Physiological, Benzalkonium Compounds/pharmacology, Disinfectants/pharmacology, Drug Resistance, Microbial, Fatty Acids/chemistry, Membrane Lipids/chemistry, Pseudomonas aeruginosa/chemistry/drug effects/growth & development, Quaternary Ammonium Compounds/*pharmacology, Regression Analysis, Sodium Hypochlorite/pharmacology, Triazines/pharmacology	Pathogenicity
Cultivation	11506066	Changes in fatty acid composition of Pseudomonas aeruginosa ATCC 15442 induced by growth conditions: consequences of resistance to quaternary ammonium compounds.	Dubois-Brissonnet F, Malgrange C, Guerin-Mechin L, Heyd B, Leveau JY	Microbios		2001	Benzalkonium Compounds/pharmacology, Culture Media, Drug Resistance, Bacterial, Fatty Acids/analysis, Microbial Sensitivity Tests/methods, Pseudomonas aeruginosa/chemistry/drug effects/growth & development, Quaternary Ammonium Compounds/pharmacology, Temperature	Pathogenicity
Enzymology	12683505	Comparison of waterless hand antisepsis agents at short application times: raising the flag of concern.	Dharan S, Hugonnet S, Sax H, Pittet D	Infect Control Hosp Epidemiol	10.1086/502182	2003	Anti-Infective Agents, Local/administration & dosage/pharmacology, Cross-Over Studies, Enterococcus faecalis/isolation & purification, Ethanol/administration & dosage/pharmacology, Gels, Hand Disinfection/methods/standards, Humans, Pseudomonas aeruginosa/isolation & purification, Staphylococcus aureus/isolation & purification, Time Factors, Treatment Outcome	Phylogeny
Biotechnology	12969304	Intrinsic and acquired resistance to quaternary ammonium compounds in food-related Pseudomonas spp.	Langsrud S, Sundheim G, Borgmann-Strahsen R	J Appl Microbiol	10.1046/j.1365-2672.2003.02064.x	2003	Anti-Bacterial Agents/pharmacology, Benzalkonium Compounds/pharmacology, Chloramines/pharmacology, Disinfectants/pharmacology, Drug Resistance, Bacterial, Food Microbiology, Glutaral/pharmacology, Microbial Sensitivity Tests/methods, Microscopy, Electron, Scanning, Peracetic Acid/pharmacology, Phenotype, Pseudomonas aeruginosa/drug effects/ultrastructure, Quaternary Ammonium Compounds/pharmacology, Sodium Dodecyl Sulfate/pharmacology, Surface-Active Agents/pharmacology, Tosyl Compounds/pharmacology	Phenotype
Enzymology	14500475	Mucin degradation mechanisms by distinct Pseudomonas aeruginosa isolates in vitro.	Aristoteli LP, Willcox MD	Infect Immun	10.1128/IAI.71.10.5565-5575.2003	2003	Chromatography, Gel, Electrophoresis, Agar Gel, Electrophoresis, Polyacrylamide Gel, Endopeptidases/biosynthesis, Glycoside Hydrolases/biosynthesis, Humans, In Vitro Techniques, Keratitis/etiology/microbiology, Mucins/chemistry/isolation & purification/metabolism, Pseudomonas Infections/etiology/microbiology, Pseudomonas aeruginosa/growth & development/isolation & purification/metabolism/*pathogenicity	Metabolism
Enzymology	14599145	Microbial and copper adsorption by smectitic clay--an experimental study.	Hassen A, Jamoussi F, Saidi N, Mabrouki Z, Fakhfakh E	Environ Technol	10.1080/09593330309385652	2003	Adsorption, Aluminum Silicates, Bacteria/isolation & purification, Bacteriophages/isolation & purification, Clay, Copper/chemistry/isolation & purification, Filtration, Gastrointestinal Agents/chemistry, Materials Testing, Silicates, Water Purification/methods	Phylogeny
Enzymology	14609558	Isolation of conjunctival mucin and differential interaction with Pseudomonas aeruginosa strains of varied pathogenic potential.	Aristoteli LP, Bojarski B, Willcox MD	Exp Eye Res	10.1016/j.exer.2003.08.007	2003	Animals, Bacterial Adhesion/physiology, Cattle, Centrifugation, Density Gradient/methods, Conjunctiva/physiology, Contact Lenses/microbiology, Densitometry/methods, Electrophoresis, Agar Gel/methods, Electrophoresis, Polyacrylamide Gel/methods, Eye Proteins/analysis, Fimbriae, Bacterial/ultrastructure, Immunohistochemistry/methods, Microscopy, Electron/methods, Molecular Weight, Mucins/isolation & purification/physiology, Pseudomonas aeruginosa/physiology/ultrastructure	Phylogeny
Pathogenicity	15243026	Anomaly and correlation of killing in the therapeutic properties of silver (I) chelation with glutamic and tartaric acids.	Batarseh KI	J Antimicrob Chemother	10.1093/jac/dkh349	2004	Bacteria/drug effects, Bacterial Infections/drug therapy/microbiology, Cell Membrane/drug effects, Chelating Agents/pharmacology/therapeutic use, DNA Helicases/antagonists & inhibitors, DNA, Bacterial/drug effects/genetics, Glutamic Acid/pharmacology/therapeutic use, Indicators and Reagents, Microbial Sensitivity Tests, Oxidation-Reduction, Oxygen/chemistry, Oxygen Consumption/drug effects, Pseudomonas aeruginosa/drug effects/metabolism, Silver Compounds/pharmacology/therapeutic use, Tartrates/pharmacology/therapeutic use	Metabolism
	16535601	Influence of a Rhamnolipid Biosurfactant on the Transport of Bacteria through a Sandy Soil.	Bai G, Brusseau ML, Miller RM	Appl Environ Microbiol	10.1128/aem.63.5.1866-1873.1997	1997
Enzymology	16914053	Chemical resistance of the gram-negative bacteria to different sanitizers in a water purification system.	Mazzola PG, Martins AM, Penna TC	BMC Infect Dis	10.1186/1471-2334-6-131	2006	Disinfectants, Drug Industry, Gram-Negative Bacteria/growth & development/metabolism, Water Purification/instrumentation/*methods	Metabolism
Pathogenicity	17080376	Experimental evaluation of an automated endoscope reprocessor with in situ generation of peracetic acid for disinfection of semicritical devices.	Sattar SA, Kibbee RJ, Tetro JA, Rook TA	Infect Control Hosp Epidemiol	10.1086/508830	2006	Cross Infection/prevention & control, Disinfectants/pharmacology, Disinfection/instrumentation/methods, Endoscopes/classification/microbiology, Equipment Contamination/prevention & control, Gram-Negative Bacteria/drug effects, Gram-Positive Bacteria/drug effects, Humans, Infection Control/methods, Peracetic Acid/pharmacology, Spores, Bacterial/drug effects	Phylogeny
Pathogenicity	18055064	Endoscope drying/storage cabinet: interest and efficacy.	Pineau L, Villard E, Duc DL, Marchetti B	J Hosp Infect	10.1016/j.jhin.2007.10.012	2007	Air Movements, Colony Count, Microbial, Cross Infection/prevention & control, Disinfection/instrumentation/methods, Endoscopes, Gastrointestinal/microbiology, Environment, Controlled, Equipment Contamination/prevention & control, Equipment Reuse, Filtration, Humans, Infection Control/*methods
Pathogenicity	18778073	Using Fourier transform infrared (FT-IR) absorbance spectroscopy and multivariate analysis to study the effect of chlorine-induced bacterial injury in water.	Al-Qadiri HM, Al-Alami NI, Al-Holy MA, Rasco BA	J Agric Food Chem	10.1021/jf801604p	2008	Bacteria/drug effects/growth & development, Chlorine/analysis/pharmacology, Colony Count, Microbial, Escherichia coli/drug effects/growth & development, Multivariate Analysis, Pseudomonas aeruginosa/drug effects/growth & development, Spectroscopy, Fourier Transform Infrared, Water/chemistry, *Water Microbiology
	20812212	Structure elucidation of two new bisbenzylisoquinoline alkaloids and NMR assignments of the alkaloids from the fruits of Tiliacora racemosa.	Patra A, Ghosh S, Mukherjee B	Magn Reson Chem	10.1002/mrc.2670	2010	Anti-Bacterial Agents/chemistry, Benzylisoquinolines/chemistry, Fruit/chemistry, Magnetic Resonance Spectroscopy, Menispermaceae/*chemistry, Molecular Structure
Pathogenicity	21422224	Dynamics of the action of biocides in Pseudomonas aeruginosa biofilms.	Bridier A, Dubois-Brissonnet F, Greub G, Thomas V, Briandet R	Antimicrob Agents Chemother	10.1128/AAC.01760-10	2011	Benzalkonium Compounds/pharmacology, Biofilms/drug effects, Disinfectants/pharmacology, Drug Resistance, Bacterial, Microscopy, Confocal, Peracetic Acid/pharmacology, Pseudomonas aeruginosa/*drug effects/physiology
Metabolism	21446164	[Contribution of blue-green pigments to hemolytic activity of Pseudomonas aeruginosa cultural fluid].	Pyzh AE, Nikandrov VN	Zh Mikrobiol Epidemiol Immunobiol		2011	Animals, Erythrocytes, Hemolysis, Oligopeptides/chemistry/metabolism, Pseudomonas aeruginosa/chemistry/growth & development/metabolism, Pyocyanine/chemistry/metabolism, Sheep
Metabolism	21779938	Biofilm and siderophore effects on secondary waste water disinfection.	Saidi N, Kouki S, Mehri I, Ben Rejeb A, Belila A, Hassen A, Ouzari H	Curr Microbiol	10.1007/s00284-011-9983-4	2011	Biofilms/radiation effects, Disinfection/methods, Oligopeptides/metabolism, Pseudomonas aeruginosa/physiology/radiation effects, Siderophores/metabolism, Ultraviolet Rays, Water Microbiology, Water Purification/methods	Enzymology
Pathogenicity	22040354	Disinfection of bacterially contaminated hydrophilic PVS impression materials.	Estafanous EW, Palenik CJ, Platt JA	J Prosthodont	10.1111/j.1532-849X.2011.00788.x	2011	Dental Disinfectants/chemistry/pharmacology, Dental Impression Materials, Disinfection/methods, Ethers, Hydrophobic and Hydrophilic Interactions, Models, Dental/microbiology, Polyvinyls, Pseudomonas aeruginosa/drug effects, Salmonella/drug effects, *Siloxanes, Staphylococcus aureus/drug effects
Pathogenicity	24112575	Origanum vulgare subsp. hirtum essential oil prevented biofilm formation and showed antibacterial activity against planktonic and sessile bacterial cells.	Schillaci D, Napoli EM, Cusimano MG, Vitale M, Ruberto A	J Food Prot	10.4315/0362-028X.JFP-13-001	2013	Biofilms/drug effects/growth & development, Colony Count, Microbial, Food Contamination/prevention & control, Food Preservation/methods, Food Preservatives/pharmacology, Microbial Sensitivity Tests, Oils, Volatile/chemistry/pharmacology, Origanum/*chemistry, Pseudomonas aeruginosa/physiology, Staphylococcus aureus/physiology
Pathogenicity	24121010	Preparation, characterization and antimicrobial study of a hydrogel (soft contact lens) material impregnated with silver nanoparticles.	Fazly Bazzaz BS, Khameneh B, Jalili-Behabadi MM, Malaekeh-Nikouei B, Mohajeri SA	Cont Lens Anterior Eye	10.1016/j.clae.2013.09.008	2013	Absorption, Physicochemical, Anti-Bacterial Agents/chemistry/pharmacology, Bacterial Physiological Phenomena/drug effects, Cell Survival/drug effects, Contact Lenses, Hydrophilic/microbiology, Disinfection/methods, Equipment Contamination/prevention & control, Equipment Design, Equipment Failure Analysis, Hydrogels/chemistry/pharmacology, Metal Nanoparticles/administration & dosage/chemistry, Silver/chemistry/*pharmacology
	24133651	Effect of the amino chain length and the transformation into citric acid salts of aryl-diphenyl-butenes and ferrocenyl-diphenyl-butenes bearing two dimethylaminoalkyl chains on their antimicrobial activities.	Jellali K, Pigeon P, Trigui F, Top S, Aifa S, Jaouen G, El Arbi M	Springerplus	10.1186/2193-1801-2-508	2013
Pathogenicity	24192397	Activity of the antiseptic polyhexanide against gram-negative bacteria.	Fabry WH, Kock HJ, Vahlensieck W	Microb Drug Resist	10.1089/mdr.2013.0113	2013	Anti-Bacterial Agents/pharmacology, Anti-Infective Agents, Local/pharmacology, Biguanides/pharmacology, Ciprofloxacin/pharmacology, Drug Combinations, Escherichia coli/drug effects/growth & development, Gentamicins/pharmacology, Haemophilus influenzae/drug effects/growth & development, Klebsiella pneumoniae/drug effects/growth & development, Microbial Sensitivity Tests, Microbial Viability/drug effects, Moraxella catarrhalis/drug effects/growth & development, Pseudomonas aeruginosa/*drug effects/growth & development, beta-Lactams/pharmacology
Pathogenicity	24266382	Antibacterial activity of Mediterranean Oyster mushrooms, species of genus Pleurotus (higher Basidiomycetes).	Schillaci D, Arizza V, Gargano ML, Venturella G	Int J Med Mushrooms	10.1615/intjmedmushr.v15.i6.70	2013	Agaricales, Anti-Bacterial Agents/pharmacology, Biological Products/pharmacology, Escherichia coli/drug effects, Pleurotus, Pseudomonas aeruginosa/drug effects, Species Specificity, Staphylococcus/drug effects	Phylogeny
Pathogenicity	24763451	Pilot study on the antibacterial activity of hydrogen peroxide and silver ions in the hospital environment.	De Giglio O, Coretti C, Lovero G, Barbuti G, Caggiano G	Ann Ig	10.7416/ai.2014.1974	2014	Anti-Infective Agents, Local/pharmacology, Cross Infection/microbiology/prevention & control, Disinfectants/pharmacology, Disinfection/methods, Drug Resistance, Multiple, Bacterial/drug effects, Hospitals, Community, Humans, Hydrogen Peroxide/pharmacology, Pilot Projects, Pseudomonas aeruginosa/drug effects, Silver/pharmacology, Staphylococcus aureus/*drug effects, Time Factors
Genetics	24786961	Genome Sequence of the Nonpathogenic Pseudomonas aeruginosa Strain ATCC 15442.	Wang Y, Li C, Gao C, Ma C, Xu P	Genome Announc	10.1128/genomeA.00421-14	2014
	25401078	Paracentrin 1, a synthetic antimicrobial peptide from the sea-urchin Paracentrotus lividus, interferes with staphylococcal and Pseudomonas aeruginosa biofilm formation.	Schillaci D, Cusimano MG, Spinello A, Barone G, Russo D, Vitale M, Parrinello D, Arizza V	AMB Express	10.1186/s13568-014-0078-z	2014
Pathogenicity	25526583	Effect of adaptation process of Pseudomonas aeruginosa to didecyldimethylammonium chloride in 2-propanol on bactericidal efficiency of this active substance.	Chojecka A, Wiercinska O, Rohm-Rodowald E, Kanclerski K, Jakimiak B	Rocz Panstw Zakl Hig		2014	2-Propanol, Adaptation, Biological, Anti-Bacterial Agents/pharmacology, Microbial Sensitivity Tests, Pseudomonas aeruginosa/drug effects/isolation & purification, Quaternary Ammonium Compounds/pharmacology, Tetracycline Resistance/drug effects	Enzymology
Pathogenicity	25846722	Synthesis, characterization and antimicrobial activity of water-soluble silver(i) complexes of metronidazole drug and selected counter-ions.	Kalinowska-Lis U, Felczak A, Checinska L, Zawadzka K, Patyna E, Lisowska K, Ochocki J	Dalton Trans	10.1039/c5dt00403a	2015	Anti-Bacterial Agents/chemistry, Crystallography, X-Ray, Dimerization, Ions, Light, Magnetic Resonance Spectroscopy, Metronidazole/chemistry, Microbial Sensitivity Tests, Molecular Structure, Nitrogen/chemistry, Silver/*chemistry, Silver Sulfadiazine/chemistry, Solubility, Spectrometry, Mass, Electrospray Ionization
Enzymology	25862353	Purification and characterization of a novel plantaricin, KL-1Y, from Lactobacillus plantarum KL-1.	Rumjuankiat K, Perez RH, Pilasombut K, Keawsompong S, Zendo T, Sonomoto K, Nitisinprasert S	World J Microbiol Biotechnol	10.1007/s11274-015-1851-0	2015	Bacteriocins/chemistry/isolation & purification/pharmacology, Chromatography, High Pressure Liquid, Chromatography, Ion Exchange, Fractional Precipitation, Gram-Negative Bacteria/drug effects, Gram-Positive Bacteria/drug effects, Hydrogen-Ion Concentration, Hydrophobic and Hydrophilic Interactions, Lactobacillus plantarum/metabolism, Microbial Viability/drug effects, Molecular Weight, Peptides/chemistry/isolation & purification/pharmacology, Protein Stability, Sequence Analysis, Protein, Temperature	Pathogenicity
Phylogeny	26084075	Susceptibility of selected strains used for evaluation of biocidal efficiency of disinfectants and antibiotic-resistant strains to didecyldimethylammonium chloride in 2-propanol.	Chojecka A, Wiercinska O, Rohm-Rodowald E, Kanclerski K, Jakimiak B	Med Dosw Mikrobiol		2015	2-Propanol/pharmacology, Anti-Bacterial Agents/pharmacology, Disinfectants/pharmacology, Drug Resistance, Microbial, Microbial Sensitivity Tests, Pseudomonas aeruginosa/classification/drug effects, Quaternary Ammonium Compounds/pharmacology, Staphylococcus aureus/classification/drug effects	Pathogenicity
	26417318	Synthesis and antibacterial activity of a new derivative of the Meldrun acid: 2,2-dimethyl-5-(4H-1,2,4-triazol-4-ylaminomethylene)-1,3-dioxane-4,6-dione (C9H10N4O4).	Sampaio GM, Teixeira AM, Coutinho HD, Sena Junior DM, Freire PT, Bento RR, Silva LE	EXCLI J		2014
	26619252	Opportunistic Gram-negative rods' capability of creating biofilm structures on polivynyl chloride and styrene-acronitrile copolymer surfaces.	Zabielska J, Kunicka-Styczynska A, Rajkowska K, Tyfa A	Acta Biochim Pol	10.18388/abp.2015_1121	2015	Bacterial Adhesion, Biofilms, Gram-Negative Aerobic Rods and Cocci/physiology, Nitriles/chemistry, Polymers/chemistry, *Polyvinyl Chloride, Surface Properties
Pathogenicity	26742560	Pseudomonas aeruginosa biofilm disruption using microbial surfactants.	Diaz De Rienzo MA, Stevenson PS, Marchant R, Banat IM	J Appl Microbiol	10.1111/jam.13049	2016	Biofilms/drug effects, Glycolipids/pharmacology, Pseudomonas aeruginosa/drug effects/physiology, Sodium Dodecyl Sulfate/pharmacology, Surface-Active Agents/pharmacology
Pathogenicity	26825819	Effect of biosurfactants on Pseudomonas aeruginosa and Staphylococcus aureus biofilms in a BioFlux channel.	Diaz De Rienzo MA, Stevenson PS, Marchant R, Banat IM	Appl Microbiol Biotechnol	10.1007/s00253-016-7310-5	2016	Anti-Bacterial Agents/analysis/pharmacology, Biofilms/drug effects, Caprylates/analysis/pharmacology, Glycolipids/analysis/pharmacology, Pseudomonas aeruginosa/drug effects/physiology, Staphylococcus aureus/drug effects/physiology, Surface-Active Agents/analysis/*pharmacology
Pathogenicity	26828469	Antibacterial Activity and Cytotoxicity of Silver(I) Complexes of Pyridine and (Benz)Imidazole Derivatives. X-ray Crystal Structure of [Ag(2,6-di(CH2OH)py)2]NO3.	Kalinowska-Lis U, Felczak A, Checinska L, Szablowska-Gadomska I, Patyna E, Malecki M, Lisowska K, Ochocki J	Molecules	10.3390/molecules21020087	2016	Animals, Anti-Bacterial Agents/chemistry/pharmacology, Benzimidazoles/chemistry, Cell Line, Tumor, Crystallography, X-Ray, Cytostatic Agents/chemistry/pharmacology, Fibroblasts/cytology/drug effects, Gram-Negative Bacteria/drug effects, Humans, Mice, Microbial Sensitivity Tests, Molecular Structure, Pyridines/chemistry, Silver Nitrate/chemistry/*pharmacology
Pathogenicity	27339305	A peptide from human beta thymosin as a platform for the development of new anti-biofilm agents for Staphylococcus spp. and Pseudomonas aeruginosa.	Schillaci D, Spinello A, Cusimano MG, Cascioferro S, Barone G, Vitale M, Arizza V	World J Microbiol Biotechnol	10.1007/s11274-016-2096-2	2016	Amino Acid Sequence, Anti-Infective Agents/chemical synthesis/chemistry/pharmacology, Biofilms, Humans, Microbial Sensitivity Tests, Models, Molecular, Molecular Dynamics Simulation, Peptides/chemical synthesis/chemistry/pharmacology, Pseudomonas aeruginosa/drug effects, Staphylococcus aureus/drug effects, Structure-Activity Relationship, Thymosin/chemistry/*genetics
Enzymology	27421857	Modeling and kinetic characterization of wastewater disinfection using chlorine and UV irradiation.	Mounaouer B, Abdennaceur H	Environ Sci Pollut Res Int	10.1007/s11356-016-7173-4	2016	Chlorine/chemistry, Kinetics, Models, Theoretical, Ultraviolet Rays, Waste Water/analysis/chemistry, Water Purification/*methods
	28066341	A New Synthetic Peptide Having Two Target of Antibacterial Action in E. coli ML35.	Barreto-Santamaria A, Curtidor H, Arevalo-Pinzon G, Herrera C, Suarez D, Perez WH, Patarroyo ME	Front Microbiol	10.3389/fmicb.2016.02006	2016
Enzymology	28073586	Experimental comparison of point-of-use filters for drinking water ultrafiltration.	Totaro M, Valentini P, Casini B, Miccoli M, Costa AL, Baggiani A	J Hosp Infect	10.1016/j.jhin.2016.11.017	2016	Caulobacteraceae/isolation & purification, Drinking Water/microbiology, Point-of-Care Systems, Pseudomonas aeruginosa/isolation & purification, Ultrafiltration/methods, Water Purification/methods	Phylogeny
Pathogenicity	28436320	Antibacterial Activity of Desert Truffles from Saudi Arabia Against Staphylococcus aureus and Pseudomonas aeruginosa.	Schillaci D, Cusimano MG, Cascioferro SM, Di Stefano V, Arizza V, Chiaramonte M, Inguglia L, Bawadekji A, Davino S, Gargano ML, Venturella G	Int J Med Mushrooms	10.1615/IntJMedMushrooms.v19.i2.30	2017	Anti-Bacterial Agents/isolation & purification/pharmacology, Ascomycota/chemistry, Microbial Sensitivity Tests, Pseudomonas aeruginosa/drug effects, Saudi Arabia, Staphylococcus aureus/*drug effects	Enzymology
Pathogenicity	28732782	Antimicrobial activity of disinfectants commonly used in the food industry in Mexico.	Iniguez-Moreno M, Avila-Novoa MG, Iniguez-Moreno E, Guerrero-Medina PJ, Gutierrez-Lomeli M	J Glob Antimicrob Resist	10.1016/j.jgar.2017.05.013	2017	Anti-Infective Agents/pharmacology, Bacteria/drug effects/growth & development, Colony Count, Microbial, Disinfectants/pharmacology, Drug Resistance, Bacterial/drug effects, Food Handling/methods/standards, Food Industry, Food Preservation, Mexico, Microbial Sensitivity Tests, Microbial Viability/drug effects, Pseudomonas aeruginosa/drug effects, Staphylococcus aureus/drug effects, Time Factors
Pathogenicity	28943153	Melittin and its potential in the destruction and inhibition of the biofilm formation by Staphylococcus aureus, Escherichia coli and Pseudomonas aeruginosa isolated from bovine milk.	Picoli T, Peter CM, Zani JL, Waller SB, Lopes MG, Boesche KN, Vargas GDA, Hubner SO, Fischer G	Microb Pathog	10.1016/j.micpath.2017.09.046	2017	Animals, Anti-Bacterial Agents/pharmacology, Bee Venoms/pharmacology, Biofilms/drug effects/growth & development, Cattle, Escherichia coli/drug effects/isolation & purification, Gram-Negative Bacteria/drug effects, Melitten/pharmacology, Microbial Sensitivity Tests, Milk/microbiology, Pseudomonas aeruginosa/drug effects/isolation & purification, Staphylococcus aureus/drug effects/isolation & purification	Enzymology
	29251486	Branched High Molecular Weight Glycopolypeptide With Broad-Spectrum Antimicrobial Activity for the Treatment of Biofilm Related Infections.	Mauro N, Schillaci D, Varvara P, Cusimano MG, Geraci DM, Giuffre M, Cavallaro G, Maida CM, Giammona G	ACS Appl Mater Interfaces	10.1021/acsami.7b16573	2017	Anti-Bacterial Agents, *Biofilms, Microbial Sensitivity Tests, Molecular Weight, Pseudomonas aeruginosa, Staphylococcus aureus, Vancomycin
Pathogenicity	29278907	Neutralization efficiency of alcohol based products used for rapid hand disinfection	Chojecka A, Tarka P, Kierzkowska A, Nitsch-Osuch A, Kanecki K	Rocz Panstw Zakl Hig		2017	Anti-Bacterial Agents/pharmacology, Bacteria/drug effects/growth & development, Colony Count, Microbial, Disinfection/methods, Ethanol/pharmacology, Hand Disinfection, Hand Hygiene/methods, Hand Sanitizers/pharmacology, Humans, Neutralization Tests/methods, Poland
Pathogenicity	29550501	Antibacterial naphthoquinone derivatives targeting resistant strain Gram-negative bacteria in biofilms.	Novais JS, Moreira CS, Silva ACJA, Loureiro RS, Sa Figueiredo AM, Ferreira VF, Castro HC, da Rocha DR	Microb Pathog	10.1016/j.micpath.2018.03.024	2018	Anti-Bacterial Agents/chemical synthesis/chemistry/pharmacology/toxicity, Biofilms/drug effects, Ciprofloxacin/pharmacology, Erythrocytes/drug effects, Gram-Negative Bacteria/drug effects, Gram-Positive Bacteria/drug effects, Humans, Materials Testing, Microbial Sensitivity Tests, Naphthoquinones/chemical synthesis/chemistry/pharmacology/toxicity
Pathogenicity	29698753	Resistance of pathogenic and spoilage microorganisms to disinfectants in the presence of organic matter and their residual effect on stainless steel and polypropylene.	Iniguez-Moreno M, Avila-Novoa MG, Gutierrez-Lomeli M	J Glob Antimicrob Resist	10.1016/j.jgar.2018.04.010	2018	Animals, Disinfectants/pharmacology, Egg Yolk/microbiology, Food-Processing Industry/instrumentation, Listeria monocytogenes/drug effects, Meat Products, Milk/microbiology, Polypropylenes/chemistry, Pseudomonas aeruginosa/drug effects, Quaternary Ammonium Compounds/pharmacology, Stainless Steel/chemistry, Surface Properties/drug effects
Pathogenicity	30060267	Investigation and Evaluation of Potential Aerosol Release by Maquet/Getinge Heater-Cooler Units Used during Cardiac Surgery.	Schwandtner S, Reichel H, Jatzwauk L, Matschke KE	Thorac Cardiovasc Surg	10.1055/s-0038-1667019	2018	Aerosols, Air Microbiology, Bacteriological Techniques, Cardiac Surgical Procedures, Cross Infection/microbiology/transmission, Environmental Monitoring/methods, Equipment Contamination, Equipment Design, Heating/instrumentation, Humans, Pseudomonas Infections/microbiology/transmission, Pseudomonas aeruginosa/isolation & purification, Risk Assessment, Water Microbiology	Enzymology
Metabolism	30279359	Antimicrobial and Antibiofilm Activity of a Recombinant Fragment of beta-Thymosin of Sea Urchin Paracentrotus lividus.	Spinello A, Cusimano MG, Schillaci D, Inguglia L, Barone G, Arizza V	Mar Drugs	10.3390/md16100366	2018	Animals, Anti-Bacterial Agents/pharmacology, Biofilms/drug effects, Microbial Sensitivity Tests/methods, Paracentrotus/metabolism, Peptides/metabolism, Pseudomonas aeruginosa/drug effects, Recombinant Proteins/metabolism, Sea Urchins/metabolism, Staphylococcus aureus/drug effects, Thymosin/*metabolism	Pathogenicity
Pathogenicity	30338060	Surface area wiped, product type, and target strain impact bactericidal efficacy of ready-to-use disinfectant Towelettes.	West AM, Nkemngong CA, Voorn MG, Wu T, Li X, Teska PJ, Oliver HF	Antimicrob Resist Infect Control	10.1186/s13756-018-0416-z	2018	Anti-Bacterial Agents/pharmacology, Cross Infection/microbiology/prevention & control, Disinfectants/pharmacology, *Disinfection/instrumentation/methods, Humans, Pseudomonas aeruginosa/drug effects, Staphylococcus aureus/drug effects, Sterilization
Pathogenicity	30772604	2,6-Disubstituted imidazo[2,1-b][1,3,4]thiadiazole derivatives as potent staphylococcal biofilm inhibitors.	Cascioferro S, Parrino B, Petri GL, Cusimano MG, Schillaci D, Di Sarno V, Musella S, Giovannetti E, Cirrincione G, Diana P	Eur J Med Chem	10.1016/j.ejmech.2019.02.007	2019	Anti-Bacterial Agents/chemical synthesis/pharmacology, Biofilms/drug effects, Gram-Negative Bacteria/drug effects/growth & development/pathogenicity, Gram-Positive Bacteria/drug effects/growth & development/pathogenicity, Indoles/chemical synthesis/pharmacology, Staphylococcus/drug effects/physiology, Thiadiazoles/chemical synthesis/*pharmacology, Virulence/drug effects
Phylogeny	30934436	Effect of Temperature and Contact Time on the Activity of Eight Disinfectants - A Classification.	Gelinas P, Goulet J, Tastayre GM, Picard GA	J Food Prot	10.4315/0362-028X-47.11.841	1984
Pathogenicity	31642168	A New Type of Anatolian Propolis: Evaluation of Its Chemical Composition, Activity Profile and Botanical Origin.	Tugba Degirmencioglu H, Guzelmeric E, Yuksel PI, Kirmizibekmez H, Deniz I, Yesilada E	Chem Biodivers	10.1002/cbdv.201900492	2019	Anti-Infective Agents/chemistry/pharmacology, Antioxidants/chemistry, Candida albicans/drug effects, Chromatography, High Pressure Liquid, Escherichia coli/drug effects, Flavonoids/chemistry, Microbial Sensitivity Tests, Phenols/chemistry/pharmacology, Populus/chemistry/metabolism, Principal Component Analysis, Propolis/*chemistry/pharmacology, Staphylococcus aureus/drug effects, Turkey	Metabolism
Metabolism	32160253	Evaluation of antibacterial properties of lactic acid bacteria from traditionally and industrially produced fermented sausages from Germany.	Bungenstock L, Abdulmawjood A, Reich F	PLoS One	10.1371/journal.pone.0230345	2020	Anti-Bacterial Agents/metabolism, Fermentation, Fermented Foods/microbiology, Food Industry, Food Microbiology, Food Safety, Foodborne Diseases/microbiology/prevention & control, Germany, Meat Products/microbiology, Microbial Sensitivity Tests, Pediocins/metabolism, Pediococcus acidilactici/isolation & purification/metabolism, Pediococcus pentosaceus/*isolation & purification/metabolism	Biotechnology
Metabolism	32173773	The effect of carbon, nitrogen and iron ions on mono-rhamnolipid production and rhamnolipid synthesis gene expression by Pseudomonas aeruginosa ATCC 15442.	Shatila F, Diallo MM, Sahar U, Ozdemir G, Yalcin HT	Arch Microbiol	10.1007/s00203-020-01857-4	2020	Carbon/metabolism, Glucose/metabolism, Glycerol/metabolism, Glycolipids/biosynthesis, Ions/metabolism, Iron/metabolism, Nitrates/metabolism, Nitrogen/metabolism, Peptones/metabolism, Pseudomonas aeruginosa/genetics/*metabolism, Surface-Active Agents/chemistry/metabolism, Tandem Mass Spectrometry	Proteome
Pathogenicity	32344836	Optimization of a High-Throughput 384-Well Plate-Based Screening Platform with Staphylococcus aureus ATCC 25923 and Pseudomonas aeruginosa ATCC 15442 Biofilms.	Gilbert-Girard S, Savijoki K, Yli-Kauhaluoma J, Fallarero A	Int J Mol Sci	10.3390/ijms21093034	2020	Anti-Bacterial Agents/pharmacology, Biofilms/drug effects, Coloring Agents, Gentian Violet, High-Throughput Screening Assays/instrumentation/methods, Humans, Microbial Sensitivity Tests/instrumentation/methods, Miniaturization, Oxazines, Pilot Projects, Pseudomonas aeruginosa/drug effects/physiology, Small Molecule Libraries, Staining and Labeling/methods, Staphylococcus aureus/drug effects/physiology, Xanthenes
Metabolism	32462243	Biogenic iron-silver nanoparticles inhibit bacterial biofilm formation due to Ag(+) release as determined by a novel phycoerythrin-based assay.	Cusimano MG, Ardizzone F, Nasillo G, Gallo M, Sfriso A, Martino-Chillura D, Schillaci D, Baldi F, Gallo G	Appl Microbiol Biotechnol	10.1007/s00253-020-10686-w	2020	Anti-Bacterial Agents/chemistry/metabolism/pharmacology, Biofilms/drug effects/growth & development, Culture Media/chemistry, Iron/analysis/chemistry/metabolism, Klebsiella oxytoca/metabolism, Metal Nanoparticles/chemistry, Microbial Sensitivity Tests, Phycoerythrin/chemistry, Polysaccharides, Bacterial/chemistry/metabolism, Pseudomonas aeruginosa/drug effects, Silver/*chemistry/metabolism/pharmacology, Staphylococcus aureus/drug effects	Pathogenicity
Pathogenicity	32656596	Use of non-thermal plasma pre-treatment to enhance antibiotic action against mature Pseudomonas aeruginosa biofilms.	Paldrychova M, Vankova E, Kasparova P, Sembolova E, Matatkova O, Masak J, Scholtz V, Julak J	World J Microbiol Biotechnol	10.1007/s11274-020-02891-6	2020	Alloys, Anti-Bacterial Agents/pharmacology, Atmospheric Pressure, Biofilms/drug effects, Ceftazidime/pharmacology, Gentamicins/pharmacology, Microscopy, Electron, Scanning, Plasma Gases, Polymyxin B/pharmacology, Pseudomonas aeruginosa/*drug effects/metabolism, Titanium/chemistry	Metabolism
Phylogeny	32679890	In Vitro Characterization of Indigenous Probiotic Strains Isolated from Colombian Creole Pigs.	Betancur C, Martinez Y, Tellez-Isaias G, Avellaneda MC, Velazquez-Marti B	Animals (Basel)	10.3390/ani10071204	2020
Pathogenicity	32831805	Antibacterial Activity of Defatted and Nondefatted Methanolic Extracts of Aframomum melegueta K. Schum. against Multidrug-Resistant Bacteria of Clinical Importance.	Olajuyigbe OO, Adedayo O, Coopoosamy RM	ScientificWorldJournal	10.1155/2020/4808432	2020	Anti-Bacterial Agents/chemistry/pharmacology, Bacteria/drug effects/isolation & purification, Drug Resistance, Multiple, Bacterial/drug effects, Humans, Methanol/chemistry, Microbial Sensitivity Tests, Plant Extracts/chemistry/pharmacology, Zingiberaceae/*chemistry	Enzymology
Pathogenicity	33375417	Thiazole Analogues of the Marine Alkaloid Nortopsentin as Inhibitors of Bacterial Biofilm Formation.	Carbone A, Cascioferro S, Parrino B, Carbone D, Pecoraro C, Schillaci D, Cusimano MG, Cirrincione G, Diana P	Molecules	10.3390/molecules26010081	2020	Alkaloids/chemistry/pharmacology, Aquatic Organisms/chemistry, Biofilms/drug effects/growth & development, Imidazoles/chemistry/pharmacology, Indoles/chemistry/pharmacology, Inhibitory Concentration 50, Microbial Sensitivity Tests, Pseudomonas aeruginosa/drug effects/physiology, Staphylococcus aureus/drug effects/physiology, Thiazoles/chemical synthesis/chemistry/pharmacology
Pathogenicity	33587974	Extensively-drug-resistant Klebsiella pneumoniae ST307 outbreak strain from north-eastern Germany does not show increased tolerance to quaternary ammonium compounds and chlorhexidine.	Hornschuh M, Zwicker P, Kramer A, Schaufler K, Heiden SE, Bohnert JA, Becker K, Hubner NO	J Hosp Infect	10.1016/j.jhin.2021.01.032	2021	Chlorhexidine/pharmacology, Disease Outbreaks, Humans, Klebsiella pneumoniae, Microbial Sensitivity Tests, Pharmaceutical Preparations, Quaternary Ammonium Compounds/pharmacology
	33946930	Antibacterial Potential by Rupture Membrane and Antioxidant Capacity of Purified Phenolic Fractions of Persea americana Leaf Extract.	Solis-Salas LM, Sierra-Rivera CA, Cobos-Puc LE, Ascacio-Valdes JA, Silva-Belmares SY	Antibiotics (Basel)	10.3390/antibiotics10050508	2021
	34357067	Response of Controlled Cell Load Biofilms to Cold Atmospheric Plasma Jet: Evidence of Extracellular Matrix Contribution.	Labadie M, Marchal F, Merbahi N, Girbal-Neuhauser E, Fontagne-Faucher C, Marcato-Romain CE	Life (Basel)	10.3390/life11070694	2021
Pathogenicity	34364453	Selective point-of-care detection of pathogenic bacteria using sialic acid functionalized gold nanoparticles.	Landa G, Miranda-Calderon LG, Sebastian V, Irusta S, Mendoza G, Arruebo M	Talanta	10.1016/j.talanta.2021.122644	2021	Anti-Bacterial Agents/pharmacology, Drug Resistance, Bacterial, Gold, Humans, Metal Nanoparticles, Methicillin-Resistant Staphylococcus aureus, Microbial Sensitivity Tests, N-Acetylneuraminic Acid, Point-of-Care Systems, Staphylococcus aureus
	34973997	Adaptation and validation of a method for evaluating the bactericidal activity of ethyl alcohol in gel format 70% (w/w).	Cruz AFD, Abreu AO, Souza PA, Deveza B, Medeiros CT, Sousa VS, Sabagh BP, Villas Boas MHS	J Microbiol Methods	10.1016/j.mimet.2021.106402	2021	Anti-Bacterial Agents/pharmacology, Disinfectants/pharmacology, Ethanol/pharmacology, Pseudomonas aeruginosa, Staphylococcus aureus
Pathogenicity	34978992	Efficacy of various decontamination methods and sterilization on contaminated and inoculated diamond-coated burs.	Wirth NM, Henrichs LE, Savett D, Lien W, Crabtree M, Vandewalle KS	Gen Dent		2022	Decontamination, Diamond, Humans, Molar, Sterilization, Surface Properties
Biotechnology	35161424	Silver Nanoparticle Production Mediated by Vitis vinifera Cane Extract: Characterization and Antibacterial Activity Evaluation.	Michailidu J, Matatkova O, Kolouchova I, Masak J, Cejkova A	Plants (Basel)	10.3390/plants11030443	2022
	36057926	Antimicrobial action of four herbal plants over mixed-species biofilms of Candida albicans with four different microorganisms.	Domingues N, Ramos LP, Pereira LM, do Rosario Estevam Dos Santos PB, Scorzoni L, Pereira TC, Abu Hasna A, Carvalho CAT, de Oliveira LD	Aust Endod J	10.1111/aej.12681	2022
	36375680	Semisynthesis, in silico study and in vitro antibacterial evaluation of fucosterol derivatives.	da Silva FEF, Avila FDN, Pereira NMO, de Freitas MD, Pessoa ODL, da Fonseca AM, da Costa JGM, Santiago GMP	Steroids	10.1016/j.steroids.2022.109137	2022

Reference

@id	authors	catalogue	doi/url	title	journal	pubmed
476	Curators of the DSMZ	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 939)	https://www.dsmz.de/collection/catalogue/details/culture/DSM-939
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.		10.1099/ijsem.0.004332	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.		10.1016/j.syapm.2013.11.002	StrainInfo introduces electronic passports for microorganisms.	Syst Appl Microbiol. 37: 42-50 2014	24321274
41730	Curators of the CIP		https://brclims.pasteur.fr/brcWeb/souche/detail/1/15268
44477	Curators of the CCUG	Culture Collection University of Gothenburg (CCUG) (CCUG 2080)	https://www.ccug.se/strain?id=2080
66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann		https://diaspora-project.de/progress.html#genomes	Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
68369				Automatically annotated from API 20NE
68382				Automatically annotated from API zym
69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.		https://microbeatlas.org/	MicrobeAtlas 1.0 beta
69480	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann		https://diaspora-project.de/progress.html#genomes	Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69481	Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch		10.21203/rs.3.rs-2527258/v1	Predictions based on the model GenomeNet Sporulation v. 1
81967	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.		10.60712/SI-ID3894.1	StrainInfo: A central database for resolving microbial strain identifiers
116083	Curators of the CIP	Collection of Institut Pasteur (CIP 103467)	https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103467

General

NCBI tax id

strain history

Name and taxonomic classification

LPSN

synonyms

Morphology

cell morphology

pigmentation

Culture and growth conditions

culture medium

culture temp

Physiology and metabolism

oxygen tolerance

spore formation

compound production

halophily

metabolite utilization

metabolite production

enzymes

fatty acid profile

fatty acids

API zym

API 20NE

API biotype100

Isolation, sampling and environmental information

isolation

isolation source categories

taxonmaps

Safety information

risk assessment

Sequence information

16S sequences

Genome sequences

Genome-based predictions

predictions

External links

straininfo link

literature

Reference