Strain identifier

BacDive ID: 12665

Type strain: Yes

Species: Tessaracoccus lubricantis

Strain Designation: KSS-17Se

Strain history: CCUG 55516 <-- P. Kämpfer KSS-17Se.

NCBI tax ID(s): 545543 (species)

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General

@ref: 8392

BacDive-ID: 12665

DSM-Number: 19926

keywords: 16S sequence, Bacteria, mesophilic, Gram-positive, rod-shaped

description: Tessaracoccus lubricantis KSS-17Se is a mesophilic, Gram-positive, rod-shaped bacterium that was isolated from oleaginous, preserved, water-mixed metalworking fluid.

NCBI tax id

  • NCBI tax id: 545543
  • Matching level: species

strain history

@refhistory
8392<- P. Kämpfer, Institut für Angewandte Mikrobiologie, Justus-Liebig Universität Giessen; KSS-17Se
67770CCUG 55516 <-- P. Kämpfer KSS-17Se.

doi: 10.13145/bacdive12665.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Propionibacteriales
  • family: Propionibacteriaceae
  • genus: Tessaracoccus
  • species: Tessaracoccus lubricantis
  • full scientific name: Tessaracoccus lubricantis Kämpfer et al. 2009

@ref: 8392

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Propionibacteriaceae

genus: Tessaracoccus

species: Tessaracoccus lubricantis

full scientific name: Tessaracoccus lubricantis Kämpfer et al. 2009

strain designation: KSS-17Se

type strain: yes

Morphology

cell morphology

  • @ref: 29126
  • gram stain: positive
  • cell length: 1.4 µm
  • cell width: 0.75 µm
  • cell shape: rod-shaped
  • motility: no

colony morphology

  • @ref: 60628
  • incubation period: 2 days

multicellular morphology

  • @ref: 18340
  • forms multicellular complex: no
  • medium name: ISP 6

pigmentation

  • @ref: 29126
  • production: no

Culture and growth conditions

culture medium

  • @ref: 8392
  • name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/92
  • composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
8392positivegrowth28mesophilic
18340positiveoptimum28mesophilic
29126positivegrowth25-30mesophilic
29126positiveoptimum25mesophilic
60628positivegrowth37mesophilic
67770positivegrowth28mesophilic

culture pH

@refabilitytypepHPH range
29126positivegrowth6.5-9.5alkaliphile
29126positiveoptimum8

Physiology and metabolism

spore formation

  • @ref: 29126
  • spore formation: no

observation

  • @ref: 67770
  • observation: quinones: MK-9(H4)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
1834017234glucose-
1834022599arabinose-
1834017992sucrose-
1834018222xylose-
1834017268myo-inositol-
1834029864mannitol-
1834028757fructose-
1834026546rhamnose-
1834016634raffinose-
1834062968cellulose-
2912617128adipate+carbon source
2912622599arabinose+carbon source
2912617057cellobiose+carbon source
2912628757fructose+carbon source
2912628260galactose+carbon source
2912617234glucose+carbon source
2912624996lactate+carbon source
2912617306maltose+carbon source
2912637684mannose+carbon source
2912616634raffinose+carbon source
2912626546rhamnose+carbon source
2912633942ribose+carbon source
2912617814salicin+carbon source
2912627082trehalose+carbon source
2912618222xylose+carbon source
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837916899D-mannitol-fermentation
6837917716lactose-fermentation
6837917992sucrose+fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase+3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase-3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase+3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin+3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase+3.2.1.51

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELGLURIBXYLMANMALLACSACGLYG
18340--++-++++--+/-+/-+/--+/--+-

API zym

@refAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
18340+++++++-+-+++-+++-+

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
8392oleaginous, preserved, water-mixed metalworking fluidGiessenGermanyDEUEurope
60628Metalworking fluidGermanyDEUEurope
67770Metalworking fluidGiessenGermanyDEUEurope

isolation source categories

Cat1Cat2
#Engineered#Industrial
#Environmental#Aquatic

Safety information

risk assessment

  • @ref: 8392
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 8392
  • description: Tessaracoccus lubricantis partial 16S rRNA gene, type strain KSS-17SeT
  • accession: FM178840
  • length: 1393
  • database: ena
  • NCBI tax ID: 545543

External links

@ref: 8392

culture collection no.: DSM 19926, CCUG 55516, JCM 19125

straininfo link

  • @ref: 81877
  • straininfo: 401860

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny19502351Tessaracoccus lubricantis sp. nov., isolated from a metalworking fluid.Kampfer P, Lodders N, Warfolomeow I, Busse HJInt J Syst Evol Microbiol10.1099/ijs.0.006841-02009Bacterial Typing Techniques, Base Composition, DNA, Bacterial/analysis, Fatty Acids/analysis, Genotype, Germany, *Lubricants, *Metals, Molecular Sequence Data, Nucleic Acid Hybridization, Phenotype, Phylogeny, Polymerase Chain Reaction/methods, Propionibacteriaceae/*classification/genetics/isolation & purification/physiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Species SpecificityGenetics
Phylogeny25052391Tessaracoccus lapidicaptus sp. nov., an actinobacterium isolated from the deep subsurface of the Iberian pyrite belt.Puente-Sanchez F, Sanchez-Roman M, Amils R, Parro VInt J Syst Evol Microbiol10.1099/ijs.0.060038-02014Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, *Iron, Molecular Sequence Data, *Phylogeny, Propionibacteriaceae/*classification/genetics/isolation & purification, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Spain, *Sulfides, Vitamin K 2/analogs & derivatives/chemistryGenetics
Phylogeny26869509Tessaracoccus flavus sp. nov., isolated from the drainage system of a lindane-producing factory.Kumari R, Singh P, Schumann P, Lal RInt J Syst Evol Microbiol10.1099/ijsem.0.0009582016Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, *Hexachlorocyclohexane, India, *Industrial Waste, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, Polyamines/chemistry, Propionibacteriaceae/*classification/genetics/isolation & purification, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistryGenetics

Reference

@idauthorscataloguedoi/urltitleID_cross_referencepubmed
8392Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19926)https://www.dsmz.de/collection/catalogue/details/culture/DSM-19926
18340Wink, J.http://www.dsmz.de/microorganisms/wink_pdf/DSM19926.pdfCompendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
29126Barberan A, Caceres Velazquez H, Jones S, Fierer N.10.1128/mSphere.00237-17Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information2555228776041
60628Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 55516)https://www.ccug.se/strain?id=55516
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
81877Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID401860.1StrainInfo: A central database for resolving microbial strain identifiers