Strain identifier
BacDive ID: 12635
Type strain:
Species: Acidipropionibacterium acidipropionici
Strain Designation: 61, P-21
Strain history: T. Mitsuoka <-- ATCC 4965 <-- R. Tittsler P-21.
NCBI tax ID(s): 1748 (species)
General
@ref: 8680
BacDive-ID: 12635
DSM-Number: 20273
keywords: 16S sequence, Bacteria, anaerobe, mesophilic
description: Acidipropionibacterium acidipropionici 61 is an anaerobe, mesophilic bacterium of the family Propionibacteriaceae.
NCBI tax id
- NCBI tax id: 1748
- Matching level: species
strain history
@ref | history |
---|---|
8680 | <- Weihenstephan, Germany <- ATCC <- R.P. Tittsler, P-21 <- E.R. Hitchner, 61 (Propionibacterium arabinosum) |
67770 | T. Mitsuoka <-- ATCC 4965 <-- R. Tittsler P-21. |
doi: 10.13145/bacdive12635.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Propionibacteriales
- family: Propionibacteriaceae
- genus: Acidipropionibacterium
- species: Acidipropionibacterium acidipropionici
- full scientific name: Acidipropionibacterium acidipropionici (Orla-Jensen 1909) Scholz and Kilian 2016
synonyms
- @ref: 20215
- synonym: Propionibacterium acidipropionici
@ref: 8680
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Propionibacteriaceae
genus: Acidipropionibacterium
species: Acidipropionibacterium acidipropionici
full scientific name: Acidipropionibacterium acidipropionici (Orla-Jensen 1909) Scholz and Kilian 2016 emend. Nouioui et al. 2018
strain designation: 61, P-21
type strain: no
Culture and growth conditions
culture medium
- @ref: 8680
- name: PROPIONIBACTERIUM AGAR (DSMZ Medium 91)
- growth: yes
- link: https://mediadive.dsmz.de/medium/91
- composition: Name: PROPIONIBACTERIUM AGAR (DSMZ Medium 91) Composition: Agar 15.0 g/l Na-lactate 10.0 g/l Casein peptone 10.0 g/l Yeast extract 5.0 g/l Distilled water
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
8680 | positive | growth | 30 | mesophilic |
53413 | positive | growth | 30 | mesophilic |
67770 | positive | growth | 30 | mesophilic |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
8680 | anaerobe |
53413 | anaerobe |
murein
- @ref: 8680
- murein short key: A41.01
- type: A3gamma LL-Dpm-Gly
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68380 | 16199 | urea | - | hydrolysis |
68380 | 29016 | arginine | - | hydrolysis |
68380 | 16024 | D-mannose | + | fermentation |
68380 | 16634 | raffinose | - | fermentation |
68380 | 29985 | L-glutamate | - | degradation |
68380 | 27897 | tryptophan | - | energy source |
metabolite production
- @ref: 68380
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68380
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
68380 | glutamyl-glutamate arylamidase | - | |
68380 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68380 | leucyl glycin arylamidase | - | 3.4.11.1 |
68380 | proline-arylamidase | + | 3.4.11.5 |
68380 | L-arginine arylamidase | + | |
68380 | alkaline phosphatase | + | 3.1.3.1 |
68380 | tryptophan deaminase | - | 4.1.99.1 |
68380 | glutamate decarboxylase | - | 4.1.1.15 |
68380 | beta-glucuronidase | - | 3.2.1.31 |
68380 | alpha-arabinosidase | + | 3.2.1.55 |
68380 | beta-glucosidase | + | 3.2.1.21 |
68380 | alpha-glucosidase | + | 3.2.1.20 |
68380 | beta-galactosidase | + | 3.2.1.23 |
68380 | alpha-galactosidase | + | 3.2.1.22 |
68380 | arginine dihydrolase | - | 3.5.3.6 |
68380 | urease | - | 3.5.1.5 |
API rID32A
@ref | URE | ADH Arg | alpha GAL | beta GAL | beta GP | alpha GLU | beta GLU | alpha ARA | beta GUR | beta NAG | MNE | RAF | GDC | alpha FUC | NIT | IND | PAL | ArgA | ProA | LGA | PheA | LeuA | PyrA | TyrA | AlaA | GlyA | HisA | GGA | SerA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8680 | - | - | + | + | - | + | + | + | - | +/- | + | - | - | - | - | - | + | + | + | - | +/- | +/- | - | +/- | +/- | +/- | +/- | - | +/- |
8680 | - | - | + | + | + | + | + | + | - | + | + | - | - | +/- | - | - | + | + | + | - | + | + | - | + | +/- | +/- | +/- | - | + |
53413 | - | - | + | + | + | + | + | + | - | + | + | - | - | + | + | - | + | + | + | - | - | + | - | - | + | + | + | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 53413
- sampling date: 1940
- country: USA
- origin.country: USA
- continent: North America
taxonmaps
- @ref: 69479
- File name: preview.99_3995.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15360;96_2030;97_2446;98_3026;99_3995&stattab=map
- Last taxonomy: Acidipropionibacterium acidipropionici
- 16S sequence: LC053842
- Sequence Identity:
- Total samples: 22874
- soil counts: 3020
- aquatic counts: 3912
- animal counts: 15402
- plant counts: 540
Safety information
risk assessment
- @ref: 8680
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Propionibacterium acidipropionici 16S-23S ribosomal RNA intergenic spacer region, complete sequence | AF218431 | 309 | ena | 1748 |
20218 | Propionibacterium acidipropionici strain ATCC 4965 16S ribosomal RNA gene, partial sequence | AY533299 | 1239 | ena | 1748 |
67770 | Propionibacterium acidipropionici gene for 16S ribosomal RNA, partial sequence, strain: JCM 6427 | LC053842 | 1495 | ena | 1748 |
GC content
@ref | GC-content |
---|---|
8680 | 67.0 |
67770 | 67 |
External links
@ref: 8680
culture collection no.: DSM 20273, ATCC 4965, NCDO 563, NCIB 5958, CCUG 36815, JCM 6427, IFO 13153, NBRC 13153, NCIMB 5958, VPI 5171
straininfo link
- @ref: 81848
- straininfo: 9784
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Metabolism | 16957244 | Use of DNA quantification to measure growth and autolysis of Lactococcus and Propionibacterium spp. in mixed populations. | Treimo J, Vegarud G, Langsrud T, Rudi K | Appl Environ Microbiol | 10.1128/AEM.00515-06 | 2006 | Autolysis, Biomarkers/analysis, Cheese/microbiology, Chymosin, DNA, Bacterial/*analysis/genetics/metabolism, Food Microbiology, Lactococcus/genetics/*growth & development/metabolism, Polymerase Chain Reaction, Propionibacterium/genetics/*growth & development/metabolism | Biotechnology |
Enzymology | 17462771 | Autolysis of propionibacteria: detection of autolytic enzymes by renaturing SDS-PAGE and additional buffer studies. | Ostlie HM, Vegarud G, Langsrud T | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2007.03.006 | 2007 | Bacteriolysis/drug effects/*physiology, Cheese/*microbiology, Electrophoresis, Polyacrylamide Gel/methods, *Food Microbiology, Hydrogen-Ion Concentration, Molecular Weight, Propionibacterium/*enzymology, Temperature | Biotechnology |
Metabolism | 18386184 | Batch fermentation model of propionic acid production by Propionibacterium acidipropionici in different carbon sources. | Coral J, Karp SG, Porto de Souza Vandenberghe L, Parada JL, Pandey A, Soccol CR | Appl Biochem Biotechnol | 10.1007/s12010-008-8196-1 | 2008 | Biomass, Culture Media, Fermentation, Glycerol/metabolism, Lactic Acid/metabolism, Molasses, Propionates/*metabolism, Propionibacterium/growth & development/*metabolism, Temperature | Cultivation |
Metabolism | 20544200 | Glycerol/glucose co-fermentation: one more proficient process to produce propionic acid by Propionibacterium acidipropionici. | Liu Y, Zhang YG, Zhang RB, Zhang F, Zhu J | Curr Microbiol | 10.1007/s00284-010-9683-5 | 2010 | Carbon/metabolism, Fermentation, Glucose/*metabolism, Glycerol/*metabolism, Propionates/*metabolism, Propionibacterium/*metabolism |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
8680 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20273) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-20273 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
53413 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 36815) | https://www.ccug.se/strain?id=36815 | |||
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
68380 | Automatically annotated from API rID32A | |||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
81848 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID9784.1 | StrainInfo: A central database for resolving microbial strain identifiers |