Strain identifier
BacDive ID: 12625
Type strain:
Species: Microlunatus phosphovorus
Strain Designation: NM-1
Strain history: CIP <- 1995, K. Nakamura, Nat. Inst. of Bioscience Human Technol., Ibaraki, Japan: strain NM-1
NCBI tax ID(s): 29405 (species)
General
@ref: 3973
BacDive-ID: 12625
DSM-Number: 10555
keywords: genome sequence, 16S sequence, Bacteria, obligate aerobe, mesophilic, Gram-positive, coccus-shaped
description: Microlunatus phosphovorus NM-1 is an obligate aerobe, mesophilic, Gram-positive bacterium that was isolated from activated sludge.
NCBI tax id
- NCBI tax id: 29405
- Matching level: species
strain history
@ref | history |
---|---|
3973 | <- JCM <- K. Nakamura, NM-1 |
67770 | K. Nakamura NM-1. |
121810 | CIP <- 1995, K. Nakamura, Nat. Inst. of Bioscience Human Technol., Ibaraki, Japan: strain NM-1 |
doi: 10.13145/bacdive12625.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Propionibacteriales
- family: Propionibacteriaceae
- genus: Microlunatus
- species: Microlunatus phosphovorus
- full scientific name: Microlunatus phosphovorus Nakamura et al. 1995
@ref: 3973
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Propionibacteriaceae
genus: Microlunatus
species: Microlunatus phosphovorus
full scientific name: Microlunatus phosphovorus Nakamura et al. 1995
strain designation: NM-1
type strain: yes
Morphology
cell morphology
- @ref: 121810
- gram stain: positive
- cell shape: coccus-shaped
- motility: no
colony morphology
@ref | colony color | incubation period | medium used |
---|---|---|---|
18357 | Ivory (1014) | 10-14 days | 5006 |
18357 | Ivory (1014) | 10-14 days | 5425 |
18357 | Ivory (1014) | 10-14 days | 5428 |
18357 | Ivory (1014) | 10-14 days | DSM 776 |
18357 | Transparent | 10-14 days | ISP 2 |
multicellular morphology
@ref | forms multicellular complex | medium name |
---|---|---|
18357 | no | ISP 2 |
18357 | no | 5006 |
18357 | no | 5425 |
18357 | no | 5428 |
18357 | no | DSM 776 |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
3973 | MICROLUNATUS MEDIUM (DSMZ Medium 776) | yes | https://mediadive.dsmz.de/medium/776 | Name: MICROLUNATUS MEDIUM (DSMZ Medium 776) Composition: KH2PO4 0.5 g/l Na glutamate 0.5 g/l Yeast extract 0.5 g/l Peptone 0.5 g/l Glucose 0.5 g/l (NH4)2SO4 0.1 g/l MgSO4 x 7 H2O 0.1 g/l Distilled water |
18357 | ISP 2 | yes | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |
18357 | 5006 | yes | Medium: 5006 Name: Composition (g/l) Sucrose 3,0 Dextrin 15,0 Meat extract 1,0 Yeast extract 2,0 Tryptone soy broth (Oxoid) 5,0 NaCl 0,5 K2HPO4 0,5 MgSO4 x 7 H2O 0,5 FeSO4 x 7 H2O 0,01 Agar 20,0 Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7,3 Usage: Maintenance Organisms: All Actinomycetes | |
18357 | 5425 | yes | Name: Brain Heart Infusion (BHI) Agar; 5425 Composition: Calf brain infusion 200.0 g/l Beef heart infusion 250.0 g/l Casein (meat) peptone 10.0 g/l Glucose 2.0 g/l NaCl 5.0 g/l Na2HPO4 2.5 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.4 Usage: Maintenance and revitalization Organisms: Dermatophilus congolensis, Nocardia brasieliensis, N. asteroides, Rhodococcus equi, R. fascians, R. rhodochrous, Streptomyces thermoviol aceus subsp. apingens, Coryneform species | |
18357 | 5428 | yes | ||
18357 | DSM 776 | yes | Name: DSM 776; MICROLUNATUS MEDIUM Glucose 0.5 g Peptone 0.5 g Yeast extract 0.5 g Na glutamate 0.5 g KH2PO4 0.5 g (NH4)2SO4 0.1 g MgSO4 x 7 H2O 0.1 g Distilled water 1000.0 ml Adjust pH to 7.0. | |
37178 | MEDIUM 135 - for Microlunatus phosphovorus and Microsphaera multipartita | yes | Distilled water make up to (1000.000 ml);Magnesium sulphate heptahydrate (0.100 g);Agar (18.000 g);Glucose (0.500 g);Yeast extract (0.500 g);Ammonium sulphate (0.100 g);Peptone (0.500 g);Potassium di-hydrogen phosphate (0.440 g);Sodium glutamate (0.500 g) | |
121810 | CIP Medium 135 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=135 | |
121810 | CIP Medium 216 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=216 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
3973 | positive | growth | 30 | mesophilic |
18357 | positive | optimum | 28 | mesophilic |
37178 | positive | growth | 30 | mesophilic |
67770 | positive | growth | 25 | mesophilic |
121810 | positive | growth | 30 | mesophilic |
121810 | no | growth | 5 | psychrophilic |
121810 | no | growth | 10 | psychrophilic |
121810 | no | growth | 22 | psychrophilic |
121810 | no | growth | 37 | mesophilic |
121810 | no | growth | 41 | thermophilic |
121810 | no | growth | 45 | thermophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 121810
- oxygen tolerance: obligate aerobe
murein
- @ref: 3973
- murein short key: A42.01
- type: A3gamma' LL-Dpm-Gly
observation
- @ref: 67770
- observation: quinones: MK-9(H4)
metabolite utilization
@ref | metabolite | utilization activity | kind of utilization tested | Chebi-ID |
---|---|---|---|---|
68371 | Potassium 5-ketogluconate | - | builds acid from | |
68371 | Potassium 2-ketogluconate | - | builds acid from | |
68371 | gluconate | - | builds acid from | 24265 |
68371 | L-arabitol | - | builds acid from | 18403 |
68371 | D-arabitol | - | builds acid from | 18333 |
68371 | L-fucose | - | builds acid from | 18287 |
68371 | D-fucose | - | builds acid from | 28847 |
68371 | D-tagatose | - | builds acid from | 16443 |
68371 | D-lyxose | - | builds acid from | 62318 |
68371 | turanose | - | builds acid from | 32528 |
68371 | gentiobiose | - | builds acid from | 28066 |
68371 | xylitol | - | builds acid from | 17151 |
68371 | glycogen | - | builds acid from | 28087 |
68371 | starch | - | builds acid from | 28017 |
68371 | raffinose | - | builds acid from | 16634 |
68371 | melezitose | - | builds acid from | 6731 |
68371 | inulin | - | builds acid from | 15443 |
68371 | trehalose | - | builds acid from | 27082 |
68371 | sucrose | - | builds acid from | 17992 |
68371 | melibiose | - | builds acid from | 28053 |
68371 | lactose | - | builds acid from | 17716 |
68371 | maltose | - | builds acid from | 17306 |
68371 | cellobiose | - | builds acid from | 17057 |
68371 | salicin | - | builds acid from | 17814 |
68371 | arbutin | - | builds acid from | 18305 |
68371 | amygdalin | - | builds acid from | 27613 |
68371 | N-acetylglucosamine | - | builds acid from | 59640 |
68371 | methyl alpha-D-glucopyranoside | - | builds acid from | 320061 |
68371 | methyl alpha-D-mannoside | - | builds acid from | 43943 |
68371 | D-sorbitol | - | builds acid from | 17924 |
68371 | D-mannitol | - | builds acid from | 16899 |
68371 | myo-inositol | - | builds acid from | 17268 |
68371 | galactitol | - | builds acid from | 16813 |
68371 | L-rhamnose | - | builds acid from | 62345 |
68371 | L-sorbose | - | builds acid from | 17266 |
68371 | D-mannose | - | builds acid from | 16024 |
68371 | D-fructose | - | builds acid from | 15824 |
68371 | D-galactose | - | builds acid from | 12936 |
68371 | methyl beta-D-xylopyranoside | - | builds acid from | 74863 |
68371 | ribitol | - | builds acid from | 15963 |
68371 | L-xylose | - | builds acid from | 65328 |
68371 | D-xylose | - | builds acid from | 65327 |
68371 | D-ribose | - | builds acid from | 16988 |
68371 | L-arabinose | - | builds acid from | 30849 |
68371 | D-arabinose | - | builds acid from | 17108 |
68371 | erythritol | - | builds acid from | 17113 |
68371 | glycerol | - | builds acid from | 17754 |
68368 | gelatin | - | hydrolysis | 5291 |
68368 | tryptophan | - | energy source | 27897 |
68368 | urea | + | hydrolysis | 16199 |
68368 | citrate | + | assimilation | 16947 |
68368 | ornithine | - | degradation | 18257 |
68368 | lysine | - | degradation | 25094 |
68368 | arginine | + | hydrolysis | 29016 |
121810 | esculin | + | hydrolysis | 4853 |
121810 | hippurate | - | hydrolysis | 606565 |
121810 | nitrate | + | reduction | 17632 |
121810 | nitrite | - | reduction | 16301 |
68379 | nitrate | - | reduction | 17632 |
68379 | esculin | + | hydrolysis | 4853 |
68379 | urea | + | hydrolysis | 16199 |
68379 | gelatin | - | hydrolysis | 5291 |
68379 | D-glucose | - | fermentation | 17634 |
68379 | D-ribose | - | fermentation | 16988 |
68379 | D-xylose | - | fermentation | 65327 |
68379 | D-mannitol | - | fermentation | 16899 |
68379 | maltose | - | fermentation | 17306 |
68379 | lactose | - | fermentation | 17716 |
68379 | sucrose | + | fermentation | 17992 |
68379 | glycogen | - | fermentation | 28087 |
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68368 | 15688 | acetoin | no |
68368 | 35581 | indole | no |
68368 | 16136 | hydrogen sulfide | no |
121810 | 35581 | indole | no |
metabolite tests
@ref | Chebi-ID | metabolite | voges-proskauer-test | indole test |
---|---|---|---|---|
68368 | 15688 | acetoin | - | |
68368 | 35581 | indole | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68379 | gelatinase | - | |
68379 | urease | + | 3.5.1.5 |
68379 | beta-glucosidase | + | 3.2.1.21 |
68379 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68379 | alpha-glucosidase | + | 3.2.1.20 |
68379 | beta-galactosidase | + | 3.2.1.23 |
68379 | beta-glucuronidase | - | 3.2.1.31 |
68379 | alkaline phosphatase | + | 3.1.3.1 |
68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68379 | pyrazinamidase | - | 3.5.1.B15 |
68368 | gelatinase | - | |
68368 | tryptophan deaminase | - | 4.1.99.1 |
68368 | urease | + | 3.5.1.5 |
68368 | ornithine decarboxylase | - | 4.1.1.17 |
68368 | lysine decarboxylase | - | 4.1.1.18 |
68368 | arginine dihydrolase | + | 3.5.3.6 |
68368 | beta-galactosidase | + | 3.2.1.23 |
121810 | oxidase | + | |
121810 | beta-galactosidase | + | 3.2.1.23 |
121810 | alcohol dehydrogenase | - | 1.1.1.1 |
121810 | gelatinase | - | |
121810 | DNase | - | |
121810 | catalase | + | 1.11.1.6 |
121810 | coagulase | - | |
121810 | gamma-glutamyltransferase | - | 2.3.2.2 |
121810 | lysine decarboxylase | - | 4.1.1.18 |
121810 | ornithine decarboxylase | - | 4.1.1.17 |
121810 | urease | + | 3.5.1.5 |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68382 | esterase (C 4) | + | |
68382 | esterase lipase (C 8) | + | |
68382 | lipase (C 14) | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | valine arylamidase | + | |
68382 | trypsin | + | 3.4.21.4 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-galactosidase | + | 3.2.1.22 |
68382 | beta-galactosidase | + | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucosidase | + | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68382 | alpha-mannosidase | + | 3.2.1.24 |
API coryne
@ref | NIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | GLU | RIB | XYL | MAN | MAL | LAC | SAC | GLYG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
18357 | - | - | - | + | - | + | + | + | + | + | - | - | - | - | - | - | - | + | - |
API zym
@ref | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase | Control |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
18357 | + | + | + | - | + | + | + | + | + | + | + | + | + | - | + | + | + | + | + | |
121810 | + | + | + | - | + | + | - | + | - | + | + | + | + | - | + | + | + | + | - | - |
API 20E
@ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL |
---|---|---|---|---|---|---|---|---|---|---|---|
18357 | + | + | - | - | + | - | + | - | - | - | - |
API 50CHac
@ref | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
121810 | - | - | - | - | - | - | - | - | - | - | +/- | - | - | - | - | - | - | - | - | - | - | - | - | - | +/- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
API biotype100
@ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
121810 | + | + | + | + | + | - | + | + | + | + | + | + | + | - | + | + | + | + | + | + | - | + | + | + | - | + | + | + | + | + | - | + | + | + | + | + | + | + | - | + | - | + | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | + | + | - | - | - | + | - | - | - | - | - | - | - | + | - | - | + | - | - | - | - | - | - | + | - | - | - | + | - | - | + | + | + | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | sample type | country | origin.country | continent | isolation date |
---|---|---|---|---|---|
3973 | activated sludge | Japan | JPN | Asia | |
67770 | Activated sludge grown on diluted corn steep liquor | Japan | JPN | Asia | |
121810 | Environment, Activated sludge | Japan | JPN | Asia | 1989 |
isolation source categories
- Cat1: #Engineered
- Cat2: #Waste
- Cat3: #Activated sludge
taxonmaps
- @ref: 69479
- File name: preview.99_8031.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_72;96_3710;97_4562;98_5854;99_8031&stattab=map
- Last taxonomy: Microlunatus phosphovorus
- 16S sequence: Z78207
- Sequence Identity:
- Total samples: 2841
- soil counts: 494
- aquatic counts: 1937
- animal counts: 341
- plant counts: 69
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
18357 | 1 | German classification |
3973 | 1 | Risk group (German classification) |
121810 | 1 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | M.phosphovorus 16S rRNA gene | Z78207 | 1468 | ena | 29405 |
3973 | Microlunatus phosphovorus gene for 16S rRNA | D26169 | 1444 | ena | 1032480 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Microlunatus phosphovorus NM-1 | GCA_000270245 | complete | ncbi | 1032480 |
66792 | Microlunatus phosphovorus NM-1 | 1032480.4 | complete | patric | 1032480 |
66792 | Microlunatus phosphovorus NM-1 | 650716058 | complete | img | 1032480 |
GC content
@ref | GC-content | method |
---|---|---|
3973 | 68 | high performance liquid chromatography (HPLC) |
67770 | 67.9 | high performance liquid chromatography (HPLC) |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
motile | no | 95.074 | no |
flagellated | no | 98.386 | no |
gram-positive | yes | 86.509 | no |
anaerobic | no | 99.034 | no |
aerobic | yes | 86.024 | no |
halophile | no | 94.69 | no |
spore-forming | no | 71.231 | no |
thermophile | no | 98.62 | yes |
glucose-util | yes | 87.827 | no |
glucose-ferment | no | 87.339 | no |
External links
@ref: 3973
culture collection no.: DSM 10555, JCM 9379, ATCC 700054, CIP 104466, FERM P-9771, HAMBI 2303, KCTC 9798, LMG 18116, NBRC 101784, NCIMB 13414, VKM Ac-1990
straininfo link
- @ref: 81839
- straininfo: 10852
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 7857797 | Microlunatus phosphovorus gen. nov., sp. nov., a new gram-positive polyphosphate-accumulating bacterium isolated from activated sludge. | Nakamura K, Hiraishi A, Yoshimi Y, Kawaharasaki M, Masuda K, Kamagata Y | Int J Syst Bacteriol | 10.1099/00207713-45-1-17 | 1995 | Base Sequence, Gram-Positive Bacteria/*classification/genetics/metabolism, Molecular Sequence Data, Polyphosphates/*metabolism, RNA, Ribosomal, 16S/chemistry/genetics | Metabolism |
Phylogeny | 16478514 | Isolation, characterization of bacteriophages specific to Microlunatus phosphovorus and their application for rapid host detection. | Lee SH, Onuki M, Satoh H, Mino T | Lett Appl Microbiol | 10.1111/j.1472-765X.2006.01840.x | 2006 | Bacteriolysis, Bacteriophages/classification/*isolation & purification/physiology/ultrastructure, *Environmental Microbiology, Fluorescence, Microscopy, Electron, Transmission, Propionibacteriaceae/isolation & purification/physiology/*virology, Sewage/*microbiology, Species Specificity, Staining and Labeling, Tokyo | Enzymology |
Phylogeny | 19946055 | Microlunatus parietis sp. nov., isolated from an indoor wall. | Kampfer P, Schafer J, Lodders N, Martin K | Int J Syst Evol Microbiol | 10.1099/ijs.0.020115-0 | 2009 | Bacterial Typing Techniques, Cell Wall/chemistry, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Diaminopimelic Acid/analysis, *Environmental Microbiology, Fatty Acids, Molecular Sequence Data, Mycolic Acids/analysis, Phospholipids/analysis, Phylogeny, Propionibacteriaceae/chemistry/*classification/genetics/*isolation & purification, Quinones/analysis, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Genetics |
Genetics | 22923697 | Deciphering the genome of polyphosphate accumulating actinobacterium Microlunatus phosphovorus. | Kawakoshi A, Nakazawa H, Fukada J, Sasagawa M, Katano Y, Nakamura S, Hosoyama A, Sasaki H, Ichikawa N, Hanada S, Kamagata Y, Nakamura K, Yamazaki S, Fujita N | DNA Res | 10.1093/dnares/dss020 | 2012 | Acid Anhydride Hydrolases/genetics, Base Sequence, Genome, Bacterial/*genetics, Molecular Sequence Data, Phosphate Transport Proteins/genetics, Phosphotransferases/genetics, Phylogeny, Physical Chromosome Mapping, Polyhydroxyalkanoates/genetics, Polyphosphates/*metabolism, Propionibacteriaceae/enzymology/*genetics/metabolism, Sequence Analysis, DNA | Phylogeny |
Metabolism | 24428681 | Metagenomic characterization of 'Candidatus Defluviicoccus tetraformis strain TFO71', a tetrad-forming organism, predominant in an anaerobic-aerobic membrane bioreactor with deteriorated biological phosphorus removal. | Nobu MK, Tamaki H, Kubota K, Liu WT | Environ Microbiol | 10.1111/1462-2920.12383 | 2014 | *Bioreactors, DNA, Bacterial/genetics, Genes, Bacterial, Glycogen/metabolism, *Metagenome, Phosphorus/*metabolism, Phylogeny, Polyhydroxyalkanoates/metabolism, Polyphosphates/metabolism, RNA, Ribosomal, 16S/genetics, Rhodospirillaceae/*genetics | Phylogeny |
Metabolism | 31572333 | The PolS-PolR Two-Component System Regulates Genes Involved in Poly-P Metabolism and Phosphate Transport in Microlunatus phosphovorus. | Zhong C, Zhang P, Liu C, Liu M, Chen W, Fu J, Qi X, Cao G | Front Microbiol | 10.3389/fmicb.2019.02127 | 2019 | ||
Metabolism | 35320769 | Carbon uptake bioenergetics of PAOs and GAOs in full-scale enhanced biological phosphorus removal systems. | Chen L, Chen H, Hu Z, Tian Y, Wang C, Xie P, Deng X, Zhang Y, Tang X, Lin X, Li B, Wei C, Qiu G | Water Res | 10.1016/j.watres.2022.118258 | 2022 | Acetates, *Actinomycetales/metabolism, Adenosine Triphosphatases/metabolism, Aspartic Acid, *Betaproteobacteria/metabolism, Bioreactors, Carbon/metabolism, Energy Metabolism, Glutamic Acid/metabolism, Glycogen/metabolism, Phosphorus/metabolism, Polyphosphates/metabolism, Propionates, Propionibacteriaceae, RNA, Ribosomal, 16S/genetics/metabolism, Succinate Dehydrogenase/metabolism | Phylogeny |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
3973 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 10555) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-10555 | |||
18357 | Wink, J. | http://www.dsmz.de/microorganisms/wink_pdf/DSM10555.pdf | Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
37178 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/16377 | ||||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
68368 | Automatically annotated from API 20E | |||||
68371 | Automatically annotated from API 50CH acid | |||||
68379 | Automatically annotated from API Coryne | |||||
68382 | Automatically annotated from API zym | |||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
81839 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID10852.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
121810 | Curators of the CIP | Collection of Institut Pasteur (CIP 104466) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104466 |