Strain identifier

BacDive ID: 12537

Type strain: Yes

Species: Prevotella nigrescens

Strain history: CIP <- 2001, CCUG <- 1980, NCTC <- 1954, L.P. Garrod, London, UK

NCBI tax ID(s): 997352 (strain), 28133 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 5019

BacDive-ID: 12537

DSM-Number: 13386

keywords: genome sequence, 16S sequence, Bacteria, anaerobe, mesophilic, Gram-negative, rod-shaped

description: Prevotella nigrescens DSM 13386 is an anaerobe, mesophilic, Gram-negative bacterium that was isolated from Vincent's gingivitis.

NCBI tax id

NCBI tax idMatching level
997352strain
28133species

strain history

@refhistory
5019<- ATCC; ATCC 33563 <- VPI; VPI 8944 (Bacteroides intermedius) <- NCTC; NCTC 9336 <- M. E. Sharpe; <- L.P. Garrod; Lambe 729-74
67770CCUG 9560 <-- NCTC 9336 <-- L. P. Garrod.
67770Y. Benno <-- T. Mitsuoka <-- NCTC 9336 <-- L. P. Garrod.
121297CIP <- 2001, CCUG <- 1980, NCTC <- 1954, L.P. Garrod, London, UK

doi: 10.13145/bacdive12537.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Bacteroidia
  • order: Bacteroidales
  • family: Prevotellaceae
  • genus: Prevotella
  • species: Prevotella nigrescens
  • full scientific name: Prevotella nigrescens Shah and Gharbia 1992
  • synonyms

    • @ref: 20215
    • synonym: Prevotella nigrescens

@ref: 5019

domain: Bacteria

phylum: Bacteroidetes

class: Bacteroidia

order: Bacteroidales

family: Prevotellaceae

genus: Prevotella

species: Prevotella nigrescens

full scientific name: Prevotella nigrescens Shah and Gharbia 1992 emend. Hahnke et al. 2016

type strain: yes

Morphology

cell morphology

  • @ref: 121297
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: no

colony morphology

@refincubation period
50191-2 days
451962 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
5019CHOPPED MEAT MEDIUM (DSMZ Medium 78)yeshttps://mediadive.dsmz.de/medium/78Name: CHOPPED MEAT MEDIUM (DSMZ Medium 78) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l Ethanol 9.5 g/l (optional) K2HPO4 5.0 g/l Yeast extract 5.0 g/l L-Cysteine HCl 0.5 g/l Haemin 0.005 g/l (optional) Resazurin 0.001 g/l Vitamin K3 0.0005 g/l (optional) Vitamin K1 (optional) NaOH (optional) Distilled water
5019PYG MEDIUM (MODIFIED) (DSMZ Medium 104)yeshttps://mediadive.dsmz.de/medium/104Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water
39314MEDIUM 20 - for Anaerobic bacteriayesAgar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml)
5019COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
121297CIP Medium 20yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=20

culture temp

@refgrowthtypetemperaturerange
5019positivegrowth37mesophilic
39314positivegrowth37mesophilic
67770positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
5019anaerobe
45196anaerobe
121297anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
12129717632nitrate-reduction
12129716301nitrite-reduction
6838016199urea-hydrolysis
6838016024D-mannose-fermentation
6838029985L-glutamate-degradation
6838017632nitrate-reduction

metabolite production

  • @ref: 121297
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
68380serine arylamidase-
68380glutamyl-glutamate arylamidase+
68380alanine arylamidase+3.4.11.2
68380pyrrolidonyl arylamidase-3.4.19.3
68380leucine arylamidase-3.4.11.1
68380leucyl glycin arylamidase+3.4.11.1
68380proline-arylamidase-3.4.11.5
68380alkaline phosphatase+3.1.3.1
68380glutamate decarboxylase-4.1.1.15
68380N-acetyl-beta-glucosaminidase-3.2.1.52
68380beta-glucuronidase-3.2.1.31
68380alpha-arabinosidase-3.2.1.55
68380beta-glucosidase-3.2.1.21
68380alpha-glucosidase+3.2.1.20
68380beta-Galactosidase 6-phosphate-
68380beta-galactosidase-3.2.1.23
68380alpha-galactosidase-3.2.1.22
68380urease-3.5.1.5
121297oxidase-
121297catalase-1.11.1.6
121297urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
121297-+--------++--------

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
5019-----+---------+++-++/---+/-++/-+/-+-
45196-----+-------+-+++-+----+--+-
5019-+/---+-------+-+++/--+----+--+-
5019-----+-----+/--+-+/-++-+----+--+-

Isolation, sampling and environmental information

isolation

@refsample typecontinentgeographic locationcountryorigin.countryisolation date
5019Vincent's gingivitisEurope
45196Human gingivitisEuropeLondonUnited KingdomGBR
67770Human gingival crevice
121297Human, GingivitisEuropeLondonUnited KingdomGBR1954

isolation source categories

Cat1Cat2Cat3
#Infection#Disease
#Host Body-Site#Oral cavity and airways#Gingiva

taxonmaps

  • @ref: 69479
  • File name: preview.99_7460.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_295;96_3484;97_4271;98_5467;99_7460&stattab=map
  • Last taxonomy: Prevotella nigrescens subclade
  • 16S sequence: X73963
  • Sequence Identity:
  • Total samples: 75740
  • soil counts: 1204
  • aquatic counts: 1593
  • animal counts: 72425
  • plant counts: 518

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
50192Risk group (German classification)
1212972Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Prevotella nigrescens strain ATCC 33563 16S ribosomal RNA gene, partial sequenceAF4148331363ena997352
20218Prevotella nigrescens ATCC 33563 16S ribosomal RNA gene, complete sequenceL164711471ena28133
20218P.nigrescens gene for 16S rRNAX739631453ena997352
5019Prevotella nigrescens gene for 16S ribosomal RNA, partial sequence, strain: JCM 12250AB5476961280ena997352
67770Prevotella nigrescens gene for 16S ribosomal RNA, partial sequence, strain: JCM 6322AB5476971480ena28133

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Prevotella nigrescens NCTC9336GCA_900454985contigncbi28133
66792Prevotella nigrescens ATCC 33563GCA_000220235scaffoldncbi997352
66792Prevotella nigrescens ATCC 33563997352.4wgspatric997352
66792Prevotella nigrescens strain FDAARGOS_148628133.93completepatric28133
66792Prevotella nigrescens strain NCTC933628133.4wgspatric28133
66792Prevotella nigrescens NCTC 93362811995243draftimg28133
66792Prevotella nigrescens ATCC 33563651324089draftimg997352
66792Prevotella nigrescens strain FDAARGOS_148628133.99completepatric28133
66792Prevotella nigrescens strain FDAARGOS_148628133.103completepatric28133
66792Prevotella nigrescens strain FDAARGOS_148628133.95completepatric28133

GC content

@refGC-contentmethod
501942.5thermal denaturation, midpoint method (Tm)
501942.6sequence analysis
6777042.5high performance liquid chromatography (HPLC)

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
motileno92.805no
gram-positiveno97.25no
anaerobicyes98.989yes
halophileno83.491no
spore-formingno95.76no
glucose-utilyes81.234no
flagellatedno97.181no
aerobicno98.459yes
thermophileno96.977yes
glucose-fermentyes53.991no

External links

@ref: 5019

culture collection no.: DSM 13386, ATCC 33563, NCTC 9336, CCUG 9560, CIP 105552, JCM 12250, VPI 8944, Lambe 729-74, CIP 104835, JCM 6322, KCTC 15081

straininfo link

  • @ref: 81754
  • straininfo: 40561

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny1390107Biochemical and chemical studies on strains designated Prevotella intermedia and proposal of a new pigmented species, Prevotella nigrescens sp. nov.Shah HN, Gharbia SEInt J Syst Bacteriol10.1099/00207713-42-4-5421992Bacterial Typing Techniques, Bacteroides/*classification/genetics/metabolism, Cellobiose/metabolism, Culture Media, DNA, Bacterial/chemistry, Fermentation, Nucleic Acid Hybridization, Phenotype, Pigmentation, Xylans/metabolismMetabolism
Metabolism7567062Characterization of immunoglobulin G-degrading proteases of Prevotella intermedia and Prevotella nigrescens.Jansen HJ, Grenier D, Van der Hoeven JSOral Microbiol Immunol10.1111/j.1399-302x.1995.tb00134.x1995Animals, Antibodies, Bacterial/*metabolism, Bacterial Proteins/chemistry/*metabolism, Cattle, Cysteine Endopeptidases/chemistry/metabolism, Dogs, Electrophoresis, Polyacrylamide Gel, Humans, Hydrogen-Ion Concentration, Hydrolysis, Immunoglobulin A/metabolism, Immunoglobulin G/*metabolism, Immunoglobulin M/metabolism, Molecular Weight, Peptide Hydrolases/chemistry/*metabolism, Prevotella/*enzymology/immunology, Prevotella intermedia/enzymology/immunology, Protease Inhibitors/metabolism, Serine Endopeptidases/chemistry/metabolism, Time FactorsEnzymology
Metabolism9171510Hydrolytic and depolymerising enzyme activity of Prevotella intermedia and Prevotella nigrescens.Stubbs S, Lewis MA, Waddington RJ, Embery GOral Dis10.1111/j.1601-0825.1996.tb00237.x1996Alkaline Phosphatase/metabolism, Chymotrypsin/metabolism, Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/metabolism, Glycosaminoglycans/metabolism, Hot Temperature, Hydrolases/*metabolism, Lipase/metabolism, Periodontal Diseases/microbiology, Porphyromonas gingivalis/enzymology, Prevotella/*enzymology, Prevotella intermedia/enzymology, Species Specificity, VirulenceEnzymology
Metabolism9345789Fermentation product analysis in the identification of black-pigmented bacteria from periodontitis.Takada K, Hirasawa MMicrobios1997Antibodies, Bacterial/analysis/immunology, Antigens, Bacterial/analysis/immunology, Bacteriological Techniques, Chromatography, Gas, Culture Media/*analysis/metabolism, Electrophoresis, Polyacrylamide Gel, Fatty Acids/*analysis/metabolism, Fermentation, Gram-Negative Anaerobic Bacteria/growth & development/immunology/*metabolism, Humans, Immunodiffusion, Periodontitis/*microbiologyEnzymology
Phylogeny9542074Biochemical and genetic characterization of a Prevotella intermedia/nigrescens-like organism.Kononen E, Matto J, Vaisanen-Tunkelrott ML, Frandsen EV, Helander I, Asikainen S, Finegold SM, Jousimies-Somer HInt J Syst Bacteriol10.1099/00207713-48-1-391998Bacterial Proteins/analysis, Classification, DNA, Bacterial/analysis, Electrophoresis, Genetic Heterogeneity, Glutamate Dehydrogenase/analysis, Immunoglobulin A/metabolism, Malate Dehydrogenase/analysis, Oligonucleotide Probes, Polymerase Chain Reaction, Prevotella intermedia/classification/*enzymology/*genetics, Species Specificity, beta-Lactamases/metabolismEnzymology
Pathogenicity9641142In vitro adhesion of two strains of Prevotella nigrescens to the dentin of the root canal: the part played by different irrigation solutions.Calas P, Rochd T, Druilhet P, Azais JMJ Endod10.1016/S0099-2399(98)80088-51998Animals, Bacterial Adhesion/*drug effects, Cattle, Citric Acid/pharmacology, Dental Pulp Cavity/microbiology, Dentin/*drug effects/ultrastructure, Microscopy, Electron, Scanning, Prevotella/*physiology, Root Canal Irrigants/*pharmacology, Smear Layer, Sodium Hypochlorite/pharmacology
Phylogeny10074526Use of PCR and sodium dodecyl sulfate-polyacrylamide gel electrophoresis techniques for differentiation of Prevotella intermedia sensu stricto and Prevotella nigrescens.Premaraj T, Kato N, Fukui K, Kato H, Watanabe KJ Clin Microbiol10.1128/JCM.37.4.1057-1061.19991999*Bacterial Typing Techniques, Base Sequence, DNA Primers/genetics, Electrophoresis, Polyacrylamide Gel/*methods, Evaluation Studies as Topic, Humans, Polymerase Chain Reaction/*methods, Prevotella/*classification/*genetics/isolation & purification, Prevotella intermedia/*classification/*genetics/isolation & purification, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Reproducibility of Results, Sodium Dodecyl Sulfate, Species SpecificityEnzymology
Phylogeny10635221Survey for collagenase gene prtC in Porphyromonas gingivalis and Porphyromonas endodontalis isolated from endodontic infections.Odell LJ, Baumgartner JC, Xia T, David LLJ Endod10.1016/S0099-2399(99)80379-31999*Bacterial Proteins, Bacterial Typing Techniques, Bacteroidaceae Infections/microbiology, Collagenases/*genetics, DNA, Bacterial/genetics, Dental Pulp Cavity/microbiology, Dental Pulp Diseases/*microbiology, *Genes, Bacterial, Humans, Microbial Collagenase/*genetics, Polymerase Chain Reaction, Polymorphism, Restriction Fragment Length, Porphyromonas/classification/*enzymology/*genetics, Porphyromonas gingivalis/classification/enzymology/genetics, RNA, Ribosomal, 16S/geneticsPathogenicity
Pathogenicity11938715In vitro effect of intracanal medicaments on strict anaerobes by means of the broth dilution method.Rosa OP, Torres SA, Ferreira CM, Ferreira FBPesqui Odontol Bras10.1590/s1517-749120020001000062002Bacteria, Anaerobic/*drug effects, Indicator Dilution Techniques, Reproducibility of Results, Root Canal Therapy/*methods, Therapeutic Irrigation
Pathogenicity12067123Scanning electron microscopy study of the adhesion of Prevotella nigrescens to the dentin of prepared root canals.Yang SE, Bae KSJ Endod10.1097/00004770-200206000-000042002Analysis of Variance, *Bacterial Adhesion, Bacteroidaceae Infections/microbiology, Dental Pulp Cavity/*microbiology/ultrastructure, Dentin/*microbiology/ultrastructure, Humans, Microscopy, Electron, Scanning, Prevotella/*physiology, Recurrence, Root Canal Preparation, *Smear Layer
Pathogenicity12238802Activity of endodontic antibacterial agents against selected anaerobic bacteria.Ferreira CM, da Silva Rosa OP, Torres SA, Ferreira FB, Bernardinelli NBraz Dent J10.1590/s0103-644020020002000082002Bacteria, Anaerobic/*drug effects, Bacteroides fragilis/drug effects, Calcium Hydroxide/pharmacology, Camphor/pharmacology, Castor Oil/pharmacology, Chlorhexidine/*analogs & derivatives/pharmacology, Chlorophenols/pharmacology, Clostridium perfringens/drug effects, Culture Media, Detergents/pharmacology, Disinfectants/*pharmacology, Drug Combinations, Fusobacterium nucleatum/drug effects, Humans, Microbial Sensitivity Tests, Prevotella/drug effects, Root Canal Irrigants/*pharmacology, SpectrophotometryCultivation
12540214Bacterial concentrations determine the ability to implant in the root canal system and translocate to lymph nodes in germ-free mice.de Melo Maltos SM, Ribeiro Sobrinho AP, Silva FV, Nicoli JR, Roque de Carvalho MA, Vieira LQ, de Macedo Farias LJ Endod10.1097/00004770-200301000-000072003Animals, Bacterial Translocation/*physiology, Colony Count, Microbial, Dental Pulp Cavity/*microbiology, Enterococcus faecalis/*physiology, Female, Germ-Free Life, Lymph Nodes/*microbiology, Male, Mice, Neck, Prevotella/*physiology
Metabolism14759706In vitro activation of the hemolysin in Prevotella nigrescens ATCC 33563 and Prevotella intermedia ATCC 25611.Silva TA, Noronha FS, de Macedo Farias L, Carvalho MARes Microbiol10.1016/j.resmic.2003.09.0102004Animals, Edetic Acid/pharmacology, Endopeptidase K/metabolism, Endopeptidases/metabolism, Enzyme Activation, Enzyme Inhibitors/pharmacology, Enzyme Stability, Hemolysin Proteins/*metabolism, *Hemolysis, Humans, Hydrogen-Ion Concentration, Kinetics, Leucine/*analogs & derivatives/pharmacology, Pepstatins/pharmacology, Phenylmethylsulfonyl Fluoride/pharmacology, Prevotella intermedia/growth & development/*metabolism, Prevotella nigrescens/growth & development/*metabolism, Rabbits, Temperature, Tosyllysine Chloromethyl Ketone/pharmacology, Trypsin/metabolismEnzymology
Phylogeny19196771Prevotella falsenii sp. nov., a Prevotella intermedia-like organism isolated from monkey dental plaque.Sakamoto M, Kumada H, Hamada N, Takahashi Y, Okamoto M, Bakir MA, Benno YInt J Syst Evol Microbiol10.1099/ijs.0.002626-02009Animals, Dental Plaque/*microbiology, Fatty Acids/analysis, Macaca fascicularis/*microbiology, Molecular Sequence Data, Phylogeny, Prevotella/chemistry/*classification/genetics, RNA, Ribosomal, 16S/genetics, Species SpecificityGenetics
Phylogeny19654360Prevotella aurantiaca sp. nov., isolated from the human oral cavity.Sakamoto M, Suzuki N, Okamoto MInt J Syst Evol Microbiol10.1099/ijs.0.012831-02009DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Fatty Acids/chemistry/metabolism, Humans, Molecular Sequence Data, Mouth/*microbiology, Periodontitis/microbiology, Phylogeny, Prevotella/*classification/genetics/*isolation & purification/metabolism, RNA, Ribosomal, 16S/geneticsMetabolism
Pathogenicity21184839Development of Prevotella nigrescens-specific PCR primers based on the nucleotide sequence of a Pn23 DNA probe.Kim MJ, Lee YS, Park JY, Kook JKAnaerobe10.1016/j.anaerobe.2010.12.0052010Bacteriological Techniques/*methods, Base Sequence, Blotting, Southern, DNA Primers/genetics, DNA, Bacterial/*genetics, Gram-Negative Bacterial Infections/diagnosis, Humans, Oligonucleotide Probes, Polymerase Chain Reaction/*methods, Prevotella intermedia/genetics, Prevotella nigrescens/*genetics/isolation & purification, Sensitivity and SpecificityEnzymology
Pathogenicity24594108Effect of estradiol on planktonic growth, coaggregation, and biofilm formation of the Prevotella intermedia group bacteria.Fteita D, Kononen E, Soderling E, Gursoy UKAnaerobe10.1016/j.anaerobe.2014.02.0032014Adult, Bacteria, Bacterial Adhesion/*drug effects, Biofilms/*drug effects/*growth & development, Colony Count, Microbial, Estradiol/*pharmacology, Estrogens/*pharmacology, Female, Fusobacterium nucleatum/physiology, Humans, Male, Middle Aged, Polysaccharides, Bacterial/metabolism, Pregnancy, Prevotella/*drug effects/growth & development/*physiology, Proteins/analysis, SpectrophotometryMetabolism
Pathogenicity26406499Intraspecies Variability Affects Heterotypic Biofilms of Porphyromonas gingivalis and Prevotella intermedia: Evidences of Strain-Dependence Biofilm Modulation by Physical Contact and by Released Soluble Factors.Barbosa GM, Colombo AV, Rodrigues PH, Simionato MRPLoS One10.1371/journal.pone.01386872015Bacterial Adhesion, Biofilms/*growth & development, Biomass, Dysbiosis/microbiology, Humans, Periodontitis/microbiology, Porphyromonas gingivalis/classification/*physiology, Prevotella intermedia/classification/genetics/*physiologyPhylogeny
Enzymology27118478Copaifera reticulata oleoresin: Chemical characterization and antibacterial properties against oral pathogens.Bardaji DK, da Silva JJ, Bianchi TC, de Souza Eugenio D, de Oliveira PF, Leandro LF, Rogez HL, Venezianni RC, Ambrosio SR, Tavares DC, Bastos JK, Martins CHAnaerobe10.1016/j.anaerobe.2016.04.0172016Anti-Bacterial Agents/chemistry/isolation & purification/*pharmacology, Bridged Bicyclo Compounds/isolation & purification, Cell Line, Cell Survival/drug effects, Dental Caries/microbiology, Fabaceae/*chemistry, Fibroblasts/cytology/drug effects, Humans, Lactobacillus casei/drug effects/growth & development/isolation & purification, Microbial Sensitivity Tests, Monocyclic Sesquiterpenes, Periodontitis/microbiology, Plant Extracts/chemistry/isolation & purification/*pharmacology, Porphyromonas gingivalis/*drug effects/growth & development/isolation & purification, Prevotella nigrescens/*drug effects/growth & development/isolation & purification, Sesquiterpenes/isolation & purification, Streptococcus mutans/drug effects/growth & development/isolation & purification, Streptococcus salivarius/drug effects/growth & development/isolation & purification, Terpenes/isolation & purificationPhylogeny
Pathogenicity28627377Mikania glomerata Sprengel extract and its major compound ent-kaurenoic acid display activity against bacteria present in endodontic infections.Moreti DLC, Leandro LF, da Silva Moraes T, Moreira MR, Sola Veneziani RC, Ambrosio SR, Gomes BP, Martins CHGAnaerobe10.1016/j.anaerobe.2017.06.0082017Anti-Bacterial Agents/isolation & purification/*pharmacology, Bacteria/*drug effects/isolation & purification, Bacterial Infections/*microbiology, Biofilms/drug effects, Brazil, Chlorhexidine/pharmacology, Diterpenes/isolation & purification/*pharmacology, Drug Synergism, Humans, Microbial Sensitivity Tests, Microbial Viability/drug effects, Mikania/*chemistry, Plant Extracts/isolation & purification/*pharmacology, Pulpitis/*microbiologyEnzymology
Pathogenicity30189320Quorum sensing molecules regulate epithelial cytokine response and biofilm-related virulence of three Prevotella species.Fteita D, Kononen E, Gursoy M, Ma X, Sintim HO, Gursoy UKAnaerobe10.1016/j.anaerobe.2018.09.0012018Bacteroidaceae Infections/genetics/*immunology/microbiology, Biofilms, Epithelial Cells/*immunology/microbiology, Gingiva/*immunology/microbiology, Humans, Interleukin-1beta/genetics/*immunology, Interleukin-6/genetics/*immunology, Interleukin-8/genetics/*immunology, Keratinocytes/immunology/microbiology, Prevotella/classification/genetics/pathogenicity/*physiology, Prevotella intermedia/genetics/pathogenicity/physiology, Prevotella nigrescens/genetics/pathogenicity/physiology, *Quorum SensingPhylogeny
35618163Chalcones with potential antibacterial and antibiofilm activities against periodontopathogenic bacteria.Satokata AAC, Souza JH, Silva LLO, Santiago MB, Ramos SB, Assis LR, Theodoro RDS, Oliveira LRE, Regasini LO, Martins CHGAnaerobe10.1016/j.anaerobe.2022.1025882022

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
5019Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 13386)https://www.dsmz.de/collection/catalogue/details/culture/DSM-13386
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
39314Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/17584
45196Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 9560)https://www.ccug.se/strain?id=9560
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68380Automatically annotated from API rID32A
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
81754Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID40561.1StrainInfo: A central database for resolving microbial strain identifiers
121297Curators of the CIPCollection of Institut Pasteur (CIP 105552)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105552