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Strain identifier

BacDive ID: 1227

Type strain: Yes

Species: Peribacillus muralis

Strain Designation: R-8192

Strain history: <- J. Heyrman; R-8192

NCBI tax ID(s): 264697 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 6274

BacDive-ID: 1227

DSM-Number: 16288

keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic

description: Peribacillus muralis R-8192 is an aerobe, mesophilic bacterium that was isolated from biofilm covering a mural painting.

NCBI tax id

  • NCBI tax id: 264697
  • Matching level: species

strain history: <- J. Heyrman; R-8192

doi: 10.13145/bacdive1227.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Peribacillus
  • species: Peribacillus muralis
  • full scientific name: Peribacillus muralis (Heyrman et al. 2005) Patel and Gupta 2020
  • synonyms

    • @ref: 20215
    • synonym: Bacillus muralis

@ref: 6274

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Peribacillus

species: Peribacillus muralis

full scientific name: Peribacillus muralis (Heyrman et al. 2005) Patel and Gupta 2020

strain designation: R-8192

type strain: yes

Morphology

cell morphology

@refmotilityconfidencegram stain
69480yes81.096
6948096.12positive

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
6274CASO AGAR (MERCK 105458) (DSMZ Medium 220)yeshttps://mediadive.dsmz.de/medium/220Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
35212MEDIUM 40- for Lactobacillus and LeuconostocyesDistilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)

culture temp

@refgrowthtypetemperaturerange
6274positivegrowth30mesophilic
35212positivegrowth30mesophilic
60396positivegrowth30-37mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 60396
  • oxygen tolerance: aerobe

spore formation

  • @ref: 69480
  • spore formation: yes
  • confidence: 92.004

halophily

  • @ref: 69480
  • halophily level: non-halophilic
  • confidence: 35.203

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
6274biofilm covering a mural paintingGreene-KreiensenGermanyDEUEurope
60396Biofilm of a mural paintingGermanyDEUEurope

isolation source categories

Cat1Cat2Cat3
#Engineered#Other#Painting
#Environmental#Biofilm

taxonmaps

  • @ref: 69479
  • File name: preview.99_583.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_370;97_418;98_477;99_583&stattab=map
  • Last taxonomy: Peribacillus
  • 16S sequence: AJ628748
  • Sequence Identity:
  • Total samples: 10636
  • soil counts: 6241
  • aquatic counts: 1051
  • animal counts: 2464
  • plant counts: 880

Safety information

risk assessment

  • @ref: 6274
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Bacillus muralis partial 16S rRNA gene, strain LMG 20238AJ3163091504ena264697
20218Bacillus muralis partial 16S rRNA gene, type strain LMG 20238TAJ6287481504ena264697
20218Lactobacillus parabuchneri strain LMG 22038 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequenceEU161609821ena152331

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Peribacillus muralis DSM 16288GCA_001439925scaffoldncbi264697
66792Bacillus muralis strain DSM 16288264697.3wgspatric264697
66792Bacillus muralis DSM 162882744054485draftimg264697

External links

@ref: 6274

culture collection no.: DSM 16288, LMG 22038, CCUG 54935, LMG 20238

straininfo link

@refpassport
20218http://www.straininfo.net/strains/377257
20218http://www.straininfo.net/strains/372840

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny18218958Bacillus butanolivorans sp. nov., a species with industrial application for the remediation of n-butanol.Kuisiene N, Raugalas J, Sproer C, Kroppenstedt RM, Chitavichius DInt J Syst Evol Microbiol10.1099/ijs.0.65332-02008Bacillus/*classification/genetics/*isolation & purification/physiology, Bacterial Typing Techniques, Base Composition, Butanols/*metabolism, DNA, Bacterial/analysis, DNA, Ribosomal Spacer/analysis, Fatty Acids/analysis, Genes, rRNA, Industrial Microbiology/methods, Molecular Sequence Data, Nucleic Acid Hybridization, Polymerase Chain Reaction, Polymorphism, Restriction Fragment Length, RNA, Ribosomal, 16S/genetics, RNA, Ribosomal, 23S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Species SpecificityGenetics
Phylogeny21335493Bacillus purgationiresistans sp. nov., isolated from a drinking-water treatment plant.Vaz-Moreira I, Figueira V, Lopes AR, Lobo-da-Cunha A, Sproer C, Schumann P, Nunes OC, Manaia CMInt J Syst Evol Microbiol10.1099/ijs.0.028605-02011Aerobiosis, Bacillus/*classification/genetics/*isolation & purification/physiology, Bacterial Typing Techniques, Catalase/metabolism, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Drinking Water/*microbiology, Hydrogen-Ion Concentration, Molecular Sequence Data, Nucleic Acid Hybridization, Oxidoreductases/metabolism, Phylogeny, Quinones/analysis, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride/metabolism, Spores, Bacterial/cytology, Temperature, *Water PurificationEnzymology
Phylogeny21441377Bacillus endoradicis sp. nov., an endophytic bacterium isolated from soybean root.Zhang YZ, Chen WF, Li M, Sui XH, Liu HC, Zhang XX, Chen WXInt J Syst Evol Microbiol10.1099/ijs.0.028936-02011Bacillus/*classification/genetics/isolation & purification/physiology, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, *Endophytes, Fatty Acids/analysis, Genes, rRNA, Molecular Sequence Data, Nucleic Acid Hybridization, Phenotype, Phylogeny, Plant Roots/*microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Soybeans/*microbiology, Species Specificity, Vitamin K 2/analysisGenetics
Phylogeny24903955Bacillus huizhouensis sp. nov., isolated from a paddy field soil.Li J, Yang G, Wu M, Zhao Y, Zhou SAntonie Van Leeuwenhoek10.1007/s10482-014-0208-22014Aerobiosis, Anaerobiosis, Bacillus/*classification/*isolation & purification, Bacterial Typing Techniques, Base Composition, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Hydrogen-Ion Concentration, Locomotion, Molecular Sequence Data, Oryza, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride/metabolism, *Soil Microbiology, Spores, Bacterial/cytology, Temperature, Vitamin K 2/analysisGenetics
Phylogeny25256951Bacillus cihuensis sp. nov., isolated from rhizosphere soil of a plant in the Cihu area of Taiwan.Liu B, Liu GH, Sengonca C, Schumann P, Wang MK, Tang JY, Chen MCAntonie Van Leeuwenhoek10.1007/s10482-014-0284-32014Bacillus/*classification/genetics/*isolation & purification/physiology, Bacterial Typing Techniques, Base Composition, Cell Wall/chemistry, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Diaminopimelic Acid/analysis, Fatty Acids/analysis, Hydrogen-Ion Concentration, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/analysis, Phylogeny, Quinones/analysis, RNA, Ribosomal, 16S/genetics, Rhizosphere, Sequence Analysis, DNA, Sodium Chloride/metabolism, *Soil Microbiology, Taiwan, TemperatureGenetics
Phylogeny26303844Bacillus gossypii sp. nov., isolated from the stem of Gossypium hirsutum.Kampfer P, Busse HJ, McInroy JA, Glaeser SPInt J Syst Evol Microbiol10.1099/ijsem.0.0005552015Alabama, Bacillus/*classification/genetics/isolation & purification, Bacterial Typing Techniques, DNA, Bacterial/genetics, Fatty Acids/chemistry, Gossypium/*microbiology, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Plant Stems/*microbiology, Polyamines/chemistry, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistryGenetics
Genetics26847897Draft Genome Sequence of Bacillus muralis LMG 20238T (DSM 16288), a Spore-Forming Bacterium Isolated from Deteriorated Mural Paintings.Wang JP, Liu B, Liu GH, Chen Q, Pan Z, Zheng XF, Chen MGenome Announc10.1128/genomeA.01691-152016Phylogeny
Phylogeny32248281Reclassification of Brevibacterium frigoritolerans DSM 8801(T) as Bacillus frigoritolerans comb. nov. Based on Genome Analysis.Liu GH, Liu B, Wang JP, Che JM, Li PFCurr Microbiol10.1007/s00284-020-01964-x2020Bacillus/classification/*genetics, Bacterial Typing Techniques, DNA, Bacterial/genetics, Fatty Acids/chemistry, *Genome, Bacterial, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Soil Microbiology, Whole Genome SequencingGenetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
6274Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 16288)https://www.dsmz.de/collection/catalogue/details/culture/DSM-16288
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
35212Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/18914
60396Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 54935)https://www.ccug.se/strain?id=54935
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)