Strain identifier
BacDive ID: 1227
Type strain:
Species: Peribacillus muralis
Strain Designation: R-8192
Strain history: <- J. Heyrman; R-8192
NCBI tax ID(s): 264697 (species)
General
@ref: 6274
BacDive-ID: 1227
DSM-Number: 16288
keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic
description: Peribacillus muralis R-8192 is an aerobe, mesophilic bacterium that was isolated from biofilm covering a mural painting.
NCBI tax id
- NCBI tax id: 264697
- Matching level: species
strain history
- @ref: 6274
- history: <- J. Heyrman; R-8192
doi: 10.13145/bacdive1227.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Peribacillus
- species: Peribacillus muralis
- full scientific name: Peribacillus muralis (Heyrman et al. 2005) Patel and Gupta 2020
synonyms
- @ref: 20215
- synonym: Bacillus muralis
@ref: 6274
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Peribacillus
species: Peribacillus muralis
full scientific name: Peribacillus muralis (Heyrman et al. 2005) Patel and Gupta 2020
strain designation: R-8192
type strain: yes
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
6274 | CASO AGAR (MERCK 105458) (DSMZ Medium 220) | yes | https://mediadive.dsmz.de/medium/220 | Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water |
35212 | MEDIUM 40- for Lactobacillus and Leuconostoc | yes | Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g) |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
6274 | positive | growth | 30 | mesophilic |
35212 | positive | growth | 30 | mesophilic |
60396 | positive | growth | 30-37 | mesophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 60396
- oxygen tolerance: aerobe
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent |
---|---|---|---|---|---|
6274 | biofilm covering a mural painting | Greene-Kreiensen | Germany | DEU | Europe |
60396 | Biofilm of a mural painting | Germany | DEU | Europe |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Other | #Painting |
#Environmental | #Biofilm |
taxonmaps
- @ref: 69479
- File name: preview.99_583.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_370;97_418;98_477;99_583&stattab=map
- Last taxonomy: Peribacillus
- 16S sequence: AJ628748
- Sequence Identity:
- Total samples: 10636
- soil counts: 6241
- aquatic counts: 1051
- animal counts: 2464
- plant counts: 880
Safety information
risk assessment
- @ref: 6274
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Bacillus muralis partial 16S rRNA gene, strain LMG 20238 | AJ316309 | 1504 | ena | 264697 |
20218 | Bacillus muralis partial 16S rRNA gene, type strain LMG 20238T | AJ628748 | 1504 | ena | 264697 |
20218 | Lactobacillus parabuchneri strain LMG 22038 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequence | EU161609 | 821 | ena | 152331 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Peribacillus muralis DSM 16288 | GCA_001439925 | scaffold | ncbi | 264697 |
66792 | Bacillus muralis strain DSM 16288 | 264697.3 | wgs | patric | 264697 |
66792 | Bacillus muralis DSM 16288 | 2744054485 | draft | img | 264697 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
flagellated | yes | 73.503 | no |
gram-positive | yes | 92.939 | no |
anaerobic | no | 99.074 | no |
aerobic | yes | 90.395 | yes |
halophile | no | 81.061 | no |
spore-forming | yes | 96.457 | no |
glucose-util | yes | 88.568 | no |
motile | yes | 86.16 | no |
thermophile | no | 99.107 | no |
glucose-ferment | no | 90.551 | no |
External links
@ref: 6274
culture collection no.: DSM 16288, LMG 22038, CCUG 54935, LMG 20238
straininfo link
- @ref: 70883
- straininfo: 265239
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 18218958 | Bacillus butanolivorans sp. nov., a species with industrial application for the remediation of n-butanol. | Kuisiene N, Raugalas J, Sproer C, Kroppenstedt RM, Chitavichius D | Int J Syst Evol Microbiol | 10.1099/ijs.0.65332-0 | 2008 | Bacillus/*classification/genetics/*isolation & purification/physiology, Bacterial Typing Techniques, Base Composition, Butanols/*metabolism, DNA, Bacterial/analysis, DNA, Ribosomal Spacer/analysis, Fatty Acids/analysis, Genes, rRNA, Industrial Microbiology/methods, Molecular Sequence Data, Nucleic Acid Hybridization, Polymerase Chain Reaction, Polymorphism, Restriction Fragment Length, RNA, Ribosomal, 16S/genetics, RNA, Ribosomal, 23S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Species Specificity | Genetics |
Phylogeny | 21335493 | Bacillus purgationiresistans sp. nov., isolated from a drinking-water treatment plant. | Vaz-Moreira I, Figueira V, Lopes AR, Lobo-da-Cunha A, Sproer C, Schumann P, Nunes OC, Manaia CM | Int J Syst Evol Microbiol | 10.1099/ijs.0.028605-0 | 2011 | Aerobiosis, Bacillus/*classification/genetics/*isolation & purification/physiology, Bacterial Typing Techniques, Catalase/metabolism, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Drinking Water/*microbiology, Hydrogen-Ion Concentration, Molecular Sequence Data, Nucleic Acid Hybridization, Oxidoreductases/metabolism, Phylogeny, Quinones/analysis, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride/metabolism, Spores, Bacterial/cytology, Temperature, *Water Purification | Enzymology |
Phylogeny | 21441377 | Bacillus endoradicis sp. nov., an endophytic bacterium isolated from soybean root. | Zhang YZ, Chen WF, Li M, Sui XH, Liu HC, Zhang XX, Chen WX | Int J Syst Evol Microbiol | 10.1099/ijs.0.028936-0 | 2011 | Bacillus/*classification/genetics/isolation & purification/physiology, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, *Endophytes, Fatty Acids/analysis, Genes, rRNA, Molecular Sequence Data, Nucleic Acid Hybridization, Phenotype, Phylogeny, Plant Roots/*microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Soybeans/*microbiology, Species Specificity, Vitamin K 2/analysis | Genetics |
Phylogeny | 24903955 | Bacillus huizhouensis sp. nov., isolated from a paddy field soil. | Li J, Yang G, Wu M, Zhao Y, Zhou S | Antonie Van Leeuwenhoek | 10.1007/s10482-014-0208-2 | 2014 | Aerobiosis, Anaerobiosis, Bacillus/*classification/*isolation & purification, Bacterial Typing Techniques, Base Composition, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Hydrogen-Ion Concentration, Locomotion, Molecular Sequence Data, Oryza, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride/metabolism, *Soil Microbiology, Spores, Bacterial/cytology, Temperature, Vitamin K 2/analysis | Genetics |
Phylogeny | 25256951 | Bacillus cihuensis sp. nov., isolated from rhizosphere soil of a plant in the Cihu area of Taiwan. | Liu B, Liu GH, Sengonca C, Schumann P, Wang MK, Tang JY, Chen MC | Antonie Van Leeuwenhoek | 10.1007/s10482-014-0284-3 | 2014 | Bacillus/*classification/genetics/*isolation & purification/physiology, Bacterial Typing Techniques, Base Composition, Cell Wall/chemistry, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Diaminopimelic Acid/analysis, Fatty Acids/analysis, Hydrogen-Ion Concentration, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/analysis, Phylogeny, Quinones/analysis, RNA, Ribosomal, 16S/genetics, Rhizosphere, Sequence Analysis, DNA, Sodium Chloride/metabolism, *Soil Microbiology, Taiwan, Temperature | Genetics |
Phylogeny | 26303844 | Bacillus gossypii sp. nov., isolated from the stem of Gossypium hirsutum. | Kampfer P, Busse HJ, McInroy JA, Glaeser SP | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000555 | 2015 | Alabama, Bacillus/*classification/genetics/isolation & purification, Bacterial Typing Techniques, DNA, Bacterial/genetics, Fatty Acids/chemistry, Gossypium/*microbiology, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Plant Stems/*microbiology, Polyamines/chemistry, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistry | Genetics |
Genetics | 26847897 | Draft Genome Sequence of Bacillus muralis LMG 20238T (DSM 16288), a Spore-Forming Bacterium Isolated from Deteriorated Mural Paintings. | Wang JP, Liu B, Liu GH, Chen Q, Pan Z, Zheng XF, Chen M | Genome Announc | 10.1128/genomeA.01691-15 | 2016 | Phylogeny | |
Phylogeny | 32248281 | Reclassification of Brevibacterium frigoritolerans DSM 8801(T) as Bacillus frigoritolerans comb. nov. Based on Genome Analysis. | Liu GH, Liu B, Wang JP, Che JM, Li PF | Curr Microbiol | 10.1007/s00284-020-01964-x | 2020 | Bacillus/classification/*genetics, Bacterial Typing Techniques, DNA, Bacterial/genetics, Fatty Acids/chemistry, *Genome, Bacterial, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Soil Microbiology, Whole Genome Sequencing | Genetics |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
6274 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 16288) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-16288 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
35212 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/18914 | ||||
60396 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 54935) | https://www.ccug.se/strain?id=54935 | |||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
70883 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID265239.1 | StrainInfo: A central database for resolving microbial strain identifiers |